RNA–Protein interactions for RNA: ENST00000530404.5

TSPAN4-219, Transcript of tetraspanin 4, humanhuman

TSL 5

Gene TSPAN4, Length 818 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TSPAN4-219ENST00000530404 FTOQ9C0B1 505 aaKnown RBP eCLIP24.19■■□□□ 1.46
TSPAN4-219ENST00000530404 CTNNA3Q9UI47 895 aa24.19■■□□□ 1.46
TSPAN4-219ENST00000530404 NT5C2P49902 561 aa24.18■■□□□ 1.46
TSPAN4-219ENST00000530404 PTPN11Q06124 597 aaPredicted RBP24.18■■□□□ 1.46
TSPAN4-219ENST00000530404 PTGISQ16647 500 aa24.18■■□□□ 1.46
TSPAN4-219ENST00000530404 GDF6Q6KF10 455 aaPredicted RBP24.18■■□□□ 1.46
TSPAN4-219ENST00000530404 KAT2BQ92831 832 aa24.18■■□□□ 1.46
TSPAN4-219ENST00000530404 CNNM2Q9H8M5 875 aa24.18■■□□□ 1.46
TSPAN4-219ENST00000530404 CERS4Q9HA82 394 aa24.18■■□□□ 1.46
TSPAN4-219ENST00000530404 PXMP2Q9NR77 195 aa24.18■■□□□ 1.46
TSPAN4-219ENST00000530404 THEGQ9P2T0 379 aa24.18■■□□□ 1.46
TSPAN4-219ENST00000530404 RFXAPO00287 272 aa24.17■■□□□ 1.46
TSPAN4-219ENST00000530404 PITPNM1O00562 1244 aa24.17■■□□□ 1.46
TSPAN4-219ENST00000530404 OPLAHO14841 1288 aa24.17■■□□□ 1.46
TSPAN4-219ENST00000530404 SORBS3O60504 671 aa24.17■■□□□ 1.46
TSPAN4-219ENST00000530404 PPP1R11O60927 126 aaPredicted RBP24.17■■□□□ 1.46
TSPAN4-219ENST00000530404 CA3P07451 260 aa24.17■■□□□ 1.46
TSPAN4-219ENST00000530404 ACTN1P12814 892 aa24.17■■□□□ 1.46
TSPAN4-219ENST00000530404 PDE4AP27815 886 aa24.17■■□□□ 1.46
TSPAN4-219ENST00000530404 SEC23AQ15436 765 aa24.17■■□□□ 1.46
TSPAN4-219ENST00000530404 IWS1Q96ST2 819 aa24.17■■□□□ 1.46
TSPAN4-219ENST00000530404 MICAL3Q7RTP6 2002 aa24.17■■□□□ 1.46
TSPAN4-219ENST00000530404 KAT6AQ92794 2004 aa24.17■■□□□ 1.46
TSPAN4-219ENST00000530404 GSPT1P15170 499 aaKnown RBP24.16■■□□□ 1.46
TSPAN4-219ENST00000530404 RFC2P35250 354 aa24.16■■□□□ 1.46
TSPAN4-219ENST00000530404 BFSP2Q13515 415 aa24.16■■□□□ 1.46
TSPAN4-219ENST00000530404 TMEM67Q5HYA8 995 aa24.16■■□□□ 1.46
TSPAN4-219ENST00000530404 CTAGE1Q96RT6 745 aa24.16■■□□□ 1.46
TSPAN4-219ENST00000530404 MAD2L2Q9UI95 211 aa24.16■■□□□ 1.46
TSPAN4-219ENST00000530404 DDX41Q9UJV9 622 aaKnown RBP24.16■■□□□ 1.46
TSPAN4-219ENST00000530404 KLRF2D3W0D1 207 aa24.15■■□□□ 1.46
TSPAN4-219ENST00000530404 ARHGEF15O94989 841 aa24.15■■□□□ 1.46
TSPAN4-219ENST00000530404 NR3C2P08235 984 aa24.15■■□□□ 1.46
TSPAN4-219ENST00000530404 DHX38Q92620 1227 aaKnown RBP24.15■■□□□ 1.46
TSPAN4-219ENST00000530404 ALG1Q9BT22 464 aa24.15■■□□□ 1.46
TSPAN4-219ENST00000530404 AMNQ9BXJ7 453 aa24.15■■□□□ 1.46
TSPAN4-219ENST00000530404 MRVI1Q9Y6F6 885 aa24.15■■□□□ 1.46
TSPAN4-219ENST00000530404 NCOR1O75376 2440 aa24.14■■□□□ 1.46
TSPAN4-219ENST00000530404 ZNF286BP0CG31 522 aa24.14■■□□□ 1.45
TSPAN4-219ENST00000530404 MYCLP12524 364 aaPredicted RBP24.14■■□□□ 1.45
TSPAN4-219ENST00000530404 CASTP20810 708 aaKnown RBP24.14■■□□□ 1.45
TSPAN4-219ENST00000530404 HSD17B4P51659 736 aa24.14■■□□□ 1.45
TSPAN4-219ENST00000530404 HOMER1Q86YM7 354 aa24.14■■□□□ 1.45
TSPAN4-219ENST00000530404 ZFP91Q96JP5 570 aaPredicted RBP24.14■■□□□ 1.45
TSPAN4-219ENST00000530404 SLC9A7Q96T83 725 aa24.14■■□□□ 1.45
TSPAN4-219ENST00000530404 MAF1Q9H063 256 aa24.14■■□□□ 1.45
TSPAN4-219ENST00000530404 SIP14410 1827 aa24.14■■□□□ 1.45
TSPAN4-219ENST00000530404 EPOPA6NHQ4 379 aa24.13■■□□□ 1.45
TSPAN4-219ENST00000530404 EIF3JO75822 258 aaKnown RBP24.13■■□□□ 1.45
TSPAN4-219ENST00000530404 HOXA13P31271 388 aaPredicted RBP24.13■■□□□ 1.45
TSPAN4-219ENST00000530404 DGKDQ16760 1214 aa24.13■■□□□ 1.45
TSPAN4-219ENST00000530404 SLC35G1Q2M3R5 365 aa24.13■■□□□ 1.45
TSPAN4-219ENST00000530404 TTC22Q5TAA0 569 aa24.13■■□□□ 1.45
TSPAN4-219ENST00000530404 ATXN2LQ8WWM7 1075 aaKnown RBP24.13■■□□□ 1.45
TSPAN4-219ENST00000530404 MTMR8Q96EF0 704 aa24.13■■□□□ 1.45
TSPAN4-219ENST00000530404 SENP2Q9HC62 589 aa24.13■■□□□ 1.45
TSPAN4-219ENST00000530404 HDAC6Q9UBN7 1215 aa24.13■■□□□ 1.45
TSPAN4-219ENST00000530404 PSEN2P49810 448 aa24.12■■□□□ 1.45
TSPAN4-219ENST00000530404 PTH1RQ03431 593 aa24.12■■□□□ 1.45
TSPAN4-219ENST00000530404 GPNMBQ14956 572 aa24.12■■□□□ 1.45
TSPAN4-219ENST00000530404 TMCO2Q7Z6W1 182 aaPredicted RBP24.12■■□□□ 1.45
TSPAN4-219ENST00000530404 SESTD1Q86VW0 696 aa24.12■■□□□ 1.45
TSPAN4-219ENST00000530404 IL31RAQ8NI17 732 aa24.12■■□□□ 1.45
TSPAN4-219ENST00000530404 ASB2Q96Q27 587 aa24.12■■□□□ 1.45
TSPAN4-219ENST00000530404 PDCD2LQ9BRP1 358 aa24.12■■□□□ 1.45
TSPAN4-219ENST00000530404 PCDHA1Q9Y5I3 950 aa24.12■■□□□ 1.45
TSPAN4-219ENST00000530404 TAF6LQ9Y6J9 622 aa24.12■■□□□ 1.45
TSPAN4-219ENST00000530404 PALM3A6NDB9 673 aaPredicted RBP24.11■■□□□ 1.45
TSPAN4-219ENST00000530404 ZBTB5O15062 677 aa24.11■■□□□ 1.45
TSPAN4-219ENST00000530404 RGS20O76081 388 aa24.11■■□□□ 1.45
TSPAN4-219ENST00000530404 KRT40Q6A162 431 aa24.11■■□□□ 1.45
TSPAN4-219ENST00000530404 SPRED2Q7Z698 418 aa24.11■■□□□ 1.45
TSPAN4-219ENST00000530404 HERC6Q8IVU3 1022 aa24.11■■□□□ 1.45
TSPAN4-219ENST00000530404 DHX37Q8IY37 1157 aaKnown RBP24.11■■□□□ 1.45
TSPAN4-219ENST00000530404 CCDC155Q8N6L0 562 aa24.11■■□□□ 1.45
TSPAN4-219ENST00000530404 CAGE1Q8TC20 777 aa24.11■■□□□ 1.45
TSPAN4-219ENST00000530404 PIGSQ96S52 555 aa24.11■■□□□ 1.45
TSPAN4-219ENST00000530404 GTF2IRD1Q9UHL9 959 aa24.11■■□□□ 1.45
TSPAN4-219ENST00000530404 TNFRSF10AO00220 468 aa24.1■■□□□ 1.45
TSPAN4-219ENST00000530404 CYP21A2P08686 494 aa24.1■■□□□ 1.45
TSPAN4-219ENST00000530404 MRPS5P82675 430 aaKnown RBP24.1■■□□□ 1.45
TSPAN4-219ENST00000530404 ZNF200P98182 395 aaPredicted RBP24.1■■□□□ 1.45
TSPAN4-219ENST00000530404 MFSD10Q14728 455 aa24.1■■□□□ 1.45
TSPAN4-219ENST00000530404 TCTN1Q2MV58 587 aa24.1■■□□□ 1.45
TSPAN4-219ENST00000530404 LRRC8DQ7L1W4 858 aa24.1■■□□□ 1.45
TSPAN4-219ENST00000530404 C7orf31Q8N865 590 aa24.1■■□□□ 1.45
TSPAN4-219ENST00000530404 AFAP1L1Q8TED9 768 aa24.1■■□□□ 1.45
TSPAN4-219ENST00000530404 ARNTL2Q8WYA1 636 aa24.1■■□□□ 1.45
TSPAN4-219ENST00000530404 GPKOWQ92917 476 aaPredicted RBP eCLIP24.1■■□□□ 1.45
TSPAN4-219ENST00000530404 CKBP12277 381 aa24.09■■□□□ 1.45
TSPAN4-219ENST00000530404 SELPP16109 830 aa24.09■■□□□ 1.45
TSPAN4-219ENST00000530404 GHRHRQ02643 423 aa24.09■■□□□ 1.45
TSPAN4-219ENST00000530404 TAP1Q03518 808 aa24.09■■□□□ 1.45
TSPAN4-219ENST00000530404 TRDNQ13061 729 aa24.09■■□□□ 1.45
TSPAN4-219ENST00000530404 LAMC2Q13753 1193 aa24.09■■□□□ 1.45
TSPAN4-219ENST00000530404 GRM4Q14833 912 aa24.09■■□□□ 1.45
TSPAN4-219ENST00000530404 PGM5Q15124 567 aa24.09■■□□□ 1.45
TSPAN4-219ENST00000530404 KIAA0753Q2KHM9 967 aa24.09■■□□□ 1.45
TSPAN4-219ENST00000530404 PPTC7Q8NI37 304 aa24.09■■□□□ 1.45
TSPAN4-219ENST00000530404 PHOSPHO2Q8TCD6 241 aa24.09■■□□□ 1.45
Retrieved 100 of 20,778 RNA–protein pairs in 18.7 ms