RNA–Protein interactions for RNA: ENST00000529994.1

SF3B2-208, Transcript of splicing factor 3b subunit 2, humanhuman

TSL 2

Gene SF3B2, Length 1,004 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SF3B2-208ENST00000529994 KIAA1217Q5T5P2 1943 aa13.31□□□□□ -0.28
SF3B2-208ENST00000529994 PRR33A8MZF0 331 aa13.3□□□□□ -0.28
SF3B2-208ENST00000529994 TOP1P11387 765 aaKnown RBP13.3□□□□□ -0.28
SF3B2-208ENST00000529994 CKBP12277 381 aa13.3□□□□□ -0.28
SF3B2-208ENST00000529994 NOVP48745 357 aa13.3□□□□□ -0.28
SF3B2-208ENST00000529994 HDAC1Q13547 482 aaPredicted RBP13.3□□□□□ -0.28
SF3B2-208ENST00000529994 LEXMQ3ZCV2 418 aa13.3□□□□□ -0.28
SF3B2-208ENST00000529994 PTCRAQ6ISU1 281 aaPredicted RBP13.3□□□□□ -0.28
SF3B2-208ENST00000529994 DNERQ8NFT8 737 aa13.3□□□□□ -0.28
SF3B2-208ENST00000529994 C17orf80Q9BSJ5 609 aa13.3□□□□□ -0.28
SF3B2-208ENST00000529994 ALG1Q9BT22 464 aa13.3□□□□□ -0.28
SF3B2-208ENST00000529994 HDAC6Q9UBN7 1215 aa13.3□□□□□ -0.28
SF3B2-208ENST00000529994 MYO7AQ13402 2215 aa13.29□□□□□ -0.28
SF3B2-208ENST00000529994 ABHD14A-ACY1A0A1B0GW23 586 aa13.29□□□□□ -0.28
SF3B2-208ENST00000529994 B4DLN1 442 aa13.29□□□□□ -0.28
SF3B2-208ENST00000529994 H3BQ06 376 aaPredicted RBP13.29□□□□□ -0.28
SF3B2-208ENST00000529994 ORC4O43929 436 aa13.29□□□□□ -0.28
SF3B2-208ENST00000529994 GH1P01241 217 aa13.29□□□□□ -0.28
SF3B2-208ENST00000529994 CXCL10P02778 98 aa13.29□□□□□ -0.28
SF3B2-208ENST00000529994 PDHBP11177 359 aa13.29□□□□□ -0.28
SF3B2-208ENST00000529994 MRPL12P52815 198 aaKnown RBP13.29□□□□□ -0.28
SF3B2-208ENST00000529994 ZNF200P98182 395 aaPredicted RBP13.29□□□□□ -0.28
SF3B2-208ENST00000529994 IKBKEQ14164 716 aa13.29□□□□□ -0.28
SF3B2-208ENST00000529994 CCDC62Q6P9F0 684 aa13.29□□□□□ -0.28
SF3B2-208ENST00000529994 LIN28BQ6ZN17 250 aaKnown RBP eCLIP13.29□□□□□ -0.28
SF3B2-208ENST00000529994 C7orf31Q8N865 590 aa13.29□□□□□ -0.28
SF3B2-208ENST00000529994 FBXO22Q8NEZ5 403 aa13.29□□□□□ -0.28
SF3B2-208ENST00000529994 TBC1D5Q92609 795 aa13.29□□□□□ -0.28
SF3B2-208ENST00000529994 WNT8BQ93098 351 aa13.29□□□□□ -0.28
SF3B2-208ENST00000529994 CPVLQ9H3G5 476 aa13.29□□□□□ -0.28
SF3B2-208ENST00000529994 RWDD1Q9H446 243 aaPredicted RBP13.29□□□□□ -0.28
SF3B2-208ENST00000529994 GTF2IRD1Q9UHL9 959 aa13.29□□□□□ -0.28
SF3B2-208ENST00000529994 ANAPC4Q9UJX5 808 aa13.29□□□□□ -0.28
SF3B2-208ENST00000529994 WDFY4Q6ZS81 3184 aa13.29□□□□□ -0.28
SF3B2-208ENST00000529994 MICAL3Q7RTP6 2002 aa13.29□□□□□ -0.28
SF3B2-208ENST00000529994 GOLGA8HP0CJ92 632 aa13.28□□□□□ -0.28
SF3B2-208ENST00000529994 CASTP20810 708 aaKnown RBP13.28□□□□□ -0.28
SF3B2-208ENST00000529994 ARHGAP1Q07960 439 aa13.28□□□□□ -0.28
SF3B2-208ENST00000529994 ZNF543Q08ER8 600 aa13.28□□□□□ -0.28
SF3B2-208ENST00000529994 CSPP1Q1MSJ5 1256 aa13.28□□□□□ -0.28
SF3B2-208ENST00000529994 ZNF618Q5T7W0 954 aa13.28□□□□□ -0.28
SF3B2-208ENST00000529994 EP400NLQ6ZTU2 488 aa13.28□□□□□ -0.28
SF3B2-208ENST00000529994 SESTD1Q86VW0 696 aa13.28□□□□□ -0.28
SF3B2-208ENST00000529994 TAAR1Q96RJ0 339 aa13.28□□□□□ -0.28
SF3B2-208ENST00000529994 MYH6P13533 1939 aa13.28□□□□□ -0.28
SF3B2-208ENST00000529994 GRXCR2A6NFK2 248 aa13.27□□□□□ -0.29
SF3B2-208ENST00000529994 SORBS3O60504 671 aa13.27□□□□□ -0.29
SF3B2-208ENST00000529994 PARNO95453 639 aaKnown RBP13.27□□□□□ -0.29
SF3B2-208ENST00000529994 IGHDP01880 384 aa13.27□□□□□ -0.29
SF3B2-208ENST00000529994 ZNF286BP0CG31 522 aa13.27□□□□□ -0.29
SF3B2-208ENST00000529994 PSEN2P49810 448 aa13.27□□□□□ -0.29
SF3B2-208ENST00000529994 MRE11P49959 708 aa13.27□□□□□ -0.29
SF3B2-208ENST00000529994 RBL2Q08999 1139 aa13.27□□□□□ -0.29
SF3B2-208ENST00000529994 MBTPS1Q14703 1052 aa13.27□□□□□ -0.29
SF3B2-208ENST00000529994 DGKDQ16760 1214 aa13.27□□□□□ -0.29
SF3B2-208ENST00000529994 TRAF7Q6Q0C0 670 aa13.27□□□□□ -0.29
SF3B2-208ENST00000529994 MYOCDQ8IZQ8 938 aa13.27□□□□□ -0.29
SF3B2-208ENST00000529994 UBA5Q9GZZ9 404 aa13.27□□□□□ -0.29
SF3B2-208ENST00000529994 INSL6Q9Y581 213 aa13.27□□□□□ -0.29
SF3B2-208ENST00000529994 WDR19Q8NEZ3 1342 aa13.27□□□□□ -0.29
SF3B2-208ENST00000529994 SALL3Q9BXA9 1300 aa13.27□□□□□ -0.29
SF3B2-208ENST00000529994 C5orf42Q9H799 3197 aa13.26□□□□□ -0.29
SF3B2-208ENST00000529994 EFCAB14O75071 495 aa13.26□□□□□ -0.29
SF3B2-208ENST00000529994 LGR5O75473 907 aa13.26□□□□□ -0.29
SF3B2-208ENST00000529994 FGRP09769 529 aa13.26□□□□□ -0.29
SF3B2-208ENST00000529994 ALADP13716 330 aa13.26□□□□□ -0.29
SF3B2-208ENST00000529994 PDE1AP54750 535 aa13.26□□□□□ -0.29
SF3B2-208ENST00000529994 HAND2P61296 217 aa13.26□□□□□ -0.29
SF3B2-208ENST00000529994 HIC1Q14526 733 aa13.26□□□□□ -0.29
SF3B2-208ENST00000529994 MFSD10Q14728 455 aa13.26□□□□□ -0.29
SF3B2-208ENST00000529994 KIAA0753Q2KHM9 967 aa13.26□□□□□ -0.29
SF3B2-208ENST00000529994 TRIM71Q2Q1W2 868 aaKnown RBP13.26□□□□□ -0.29
SF3B2-208ENST00000529994 NLRC5Q86WI3 1866 aa13.26□□□□□ -0.29
SF3B2-208ENST00000529994 COL20A1Q9P218 1284 aa13.26□□□□□ -0.29
SF3B2-208ENST00000529994 PNMA2Q9UL42 364 aa13.26□□□□□ -0.29
SF3B2-208ENST00000529994 TRIM6-TRIM34B2RNG4 842 aa13.25□□□□□ -0.29
SF3B2-208ENST00000529994 FGAP02671 866 aa13.25□□□□□ -0.29
SF3B2-208ENST00000529994 EIF2AK2P19525 551 aaKnown RBP13.25□□□□□ -0.29
SF3B2-208ENST00000529994 NHLH1Q02575 133 aa13.25□□□□□ -0.29
SF3B2-208ENST00000529994 PTK7Q13308 1070 aa13.25□□□□□ -0.29
SF3B2-208ENST00000529994 AAMPQ13685 434 aa13.25□□□□□ -0.29
SF3B2-208ENST00000529994 STXBP2Q15833 593 aa13.25□□□□□ -0.29
SF3B2-208ENST00000529994 DHX37Q8IY37 1157 aaKnown RBP13.25□□□□□ -0.29
SF3B2-208ENST00000529994 DBF4BQ8NFT6 615 aa13.25□□□□□ -0.29
SF3B2-208ENST00000529994 SYTL5Q8TDW5 730 aaPredicted RBP13.25□□□□□ -0.29
SF3B2-208ENST00000529994 NSUN6Q8TEA1 469 aaKnown RBP13.25□□□□□ -0.29
SF3B2-208ENST00000529994 ANKS1AQ92625 1134 aa13.25□□□□□ -0.29
SF3B2-208ENST00000529994 RILPL2Q969X0 211 aa13.25□□□□□ -0.29
SF3B2-208ENST00000529994 MRPL38Q96DV4 380 aaKnown RBP13.25□□□□□ -0.29
SF3B2-208ENST00000529994 ZKSCAN3Q9BRR0 538 aa13.25□□□□□ -0.29
SF3B2-208ENST00000529994 TCP11L1Q9NUJ3 509 aa13.25□□□□□ -0.29
SF3B2-208ENST00000529994 DDX41Q9UJV9 622 aaKnown RBP13.25□□□□□ -0.29
SF3B2-208ENST00000529994 TRIOO75962 3097 aa13.25□□□□□ -0.29
SF3B2-208ENST00000529994 DCXO43602 365 aa13.24□□□□□ -0.29
SF3B2-208ENST00000529994 AMHP03971 560 aa13.24□□□□□ -0.29
SF3B2-208ENST00000529994 SNHG28P0DPA3 235 aa13.24□□□□□ -0.29
SF3B2-208ENST00000529994 THPOP40225 353 aa13.24□□□□□ -0.29
SF3B2-208ENST00000529994 ALX1Q15699 326 aa13.24□□□□□ -0.29
SF3B2-208ENST00000529994 PTPROQ16827 1216 aa13.24□□□□□ -0.29
SF3B2-208ENST00000529994 EPC2Q52LR7 807 aa13.24□□□□□ -0.29
Retrieved 100 of 20,778 RNA–protein pairs in 81.9 ms