RNA–Protein interactions for RNA: ENST00000529974.1

CTSC-206, Transcript of cathepsin C, humanhuman

TSL 1 (best) BASIC

Gene CTSC, Length 747 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTSC-206ENST00000529974 ANO2Q9NQ90 1003 aa12.94□□□□□ -0.34
CTSC-206ENST00000529974 PNMA6FA0A0J9YX94 578 aa12.93□□□□□ -0.34
CTSC-206ENST00000529974 PLEKHA8P1O95397 391 aa12.93□□□□□ -0.34
CTSC-206ENST00000529974 GH1P01241 217 aa12.93□□□□□ -0.34
CTSC-206ENST00000529974 CYP2C9P11712 490 aa12.93□□□□□ -0.34
CTSC-206ENST00000529974 NBPF20Q3BBV1 942 aa12.93□□□□□ -0.34
CTSC-206ENST00000529974 PSRC1Q6PGN9 363 aaPredicted RBP12.93□□□□□ -0.34
CTSC-206ENST00000529974 AFG1LQ8WV93 481 aa12.93□□□□□ -0.34
CTSC-206ENST00000529974 MAP3K14Q99558 947 aa12.93□□□□□ -0.34
CTSC-206ENST00000529974 MTA3Q9BTC8 594 aa12.93□□□□□ -0.34
CTSC-206ENST00000529974 SPZ1Q9BXG8 430 aa12.93□□□□□ -0.34
CTSC-206ENST00000529974 IL23AQ9NPF7 189 aa12.93□□□□□ -0.34
CTSC-206ENST00000529974 MAP3K20Q9NYL2 800 aaKnown RBP12.93□□□□□ -0.34
CTSC-206ENST00000529974 XIRP2A4UGR9 3374 aa12.92□□□□□ -0.34
CTSC-206ENST00000529974 EIF3JO75822 258 aaKnown RBP12.92□□□□□ -0.34
CTSC-206ENST00000529974 MCM5P33992 734 aa12.92□□□□□ -0.34
CTSC-206ENST00000529974 CCL23P55773 120 aa12.92□□□□□ -0.34
CTSC-206ENST00000529974 PGM5Q15124 567 aa12.92□□□□□ -0.34
CTSC-206ENST00000529974 BRDTQ58F21 947 aaPredicted RBP12.92□□□□□ -0.34
CTSC-206ENST00000529974 NFRKBQ6P4R8 1299 aa12.92□□□□□ -0.34
CTSC-206ENST00000529974 CASC1Q6TDU7 716 aa12.92□□□□□ -0.34
CTSC-206ENST00000529974 ZNF365Q70YC5 407 aa12.92□□□□□ -0.34
CTSC-206ENST00000529974 KAT2BQ92831 832 aa12.92□□□□□ -0.34
CTSC-206ENST00000529974 EMID1Q96A84 441 aaPredicted RBP12.92□□□□□ -0.34
CTSC-206ENST00000529974 CTAGE1Q96RT6 745 aa12.92□□□□□ -0.34
CTSC-206ENST00000529974 CXXC1Q9P0U4 656 aaPredicted RBP12.92□□□□□ -0.34
CTSC-206ENST00000529974 DDX41Q9UJV9 622 aaKnown RBP12.92□□□□□ -0.34
CTSC-206ENST00000529974 PTPRSQ13332 1948 aa12.92□□□□□ -0.34
CTSC-206ENST00000529974 TMEM265A0A087WTH1 108 aa12.91□□□□□ -0.34
CTSC-206ENST00000529974 GCOM1H8Y6P7 765 aaPredicted RBP12.91□□□□□ -0.34
CTSC-206ENST00000529974 KPNA6O60684 536 aa12.91□□□□□ -0.34
CTSC-206ENST00000529974 POLR2MP0CAP2 368 aa12.91□□□□□ -0.34
CTSC-206ENST00000529974 HOXD8P13378 290 aaPredicted RBP12.91□□□□□ -0.34
CTSC-206ENST00000529974 RXRAP19793 462 aa12.91□□□□□ -0.34
CTSC-206ENST00000529974 DNAJB2P25686 324 aa12.91□□□□□ -0.34
CTSC-206ENST00000529974 LIFRP42702 1097 aa12.91□□□□□ -0.34
CTSC-206ENST00000529974 FAM47CQ5HY64 1035 aa12.91□□□□□ -0.34
CTSC-206ENST00000529974 VSIG10LQ86VR7 867 aa12.91□□□□□ -0.34
CTSC-206ENST00000529974 SAMD3Q8N6K7 520 aa12.91□□□□□ -0.34
CTSC-206ENST00000529974 CTCFLQ8NI51 663 aaPredicted RBP12.91□□□□□ -0.34
CTSC-206ENST00000529974 PIBF1Q8WXW3 757 aa12.91□□□□□ -0.34
CTSC-206ENST00000529974 GPKOWQ92917 476 aaPredicted RBP eCLIP12.91□□□□□ -0.34
CTSC-206ENST00000529974 SCLYQ96I15 445 aa12.91□□□□□ -0.34
CTSC-206ENST00000529974 TMEM87BQ96K49 555 aa12.91□□□□□ -0.34
CTSC-206ENST00000529974 CDX2Q99626 313 aaPredicted RBP12.91□□□□□ -0.34
CTSC-206ENST00000529974 LRRC2Q9BYS8 371 aa12.91□□□□□ -0.34
CTSC-206ENST00000529974 SEMA6BQ9H3T3 888 aa12.91□□□□□ -0.34
CTSC-206ENST00000529974 MRVI1Q9Y6F6 885 aa12.91□□□□□ -0.34
CTSC-206ENST00000529974 TET1Q8NFU7 2136 aa12.91□□□□□ -0.34
CTSC-206ENST00000529974 GRXCR1A8MXD5 290 aa12.9□□□□□ -0.34
CTSC-206ENST00000529974 MYCLP12524 364 aaPredicted RBP12.9□□□□□ -0.34
CTSC-206ENST00000529974 UBA1P22314 1058 aaKnown RBP12.9□□□□□ -0.34
CTSC-206ENST00000529974 KIF5BP33176 963 aa12.9□□□□□ -0.34
CTSC-206ENST00000529974 PTPN11Q06124 597 aaPredicted RBP12.9□□□□□ -0.34
CTSC-206ENST00000529974 TRAF1Q13077 416 aa12.9□□□□□ -0.34
CTSC-206ENST00000529974 FCHSD1Q86WN1 690 aa12.9□□□□□ -0.34
CTSC-206ENST00000529974 RAB11FIP4Q86YS3 637 aa12.9□□□□□ -0.34
CTSC-206ENST00000529974 SRBD1Q8N5C6 995 aaKnown RBP12.9□□□□□ -0.34
CTSC-206ENST00000529974 PPTC7Q8NI37 304 aa12.9□□□□□ -0.34
CTSC-206ENST00000529974 HERVK_113Q902F9 699 aa12.9□□□□□ -0.34
CTSC-206ENST00000529974 TRIP12Q14669 1992 aaPredicted RBP12.9□□□□□ -0.34
CTSC-206ENST00000529974 MUC3AQ02505 3323 aa12.89□□□□□ -0.35
CTSC-206ENST00000529974 HSFX4A0A1B0GTS1 333 aaPredicted RBP12.89□□□□□ -0.35
CTSC-206ENST00000529974 HSFX3A0A1B0GWH4 333 aaPredicted RBP12.89□□□□□ -0.35
CTSC-206ENST00000529974 CCDC69A6NI79 296 aa12.89□□□□□ -0.35
CTSC-206ENST00000529974 CDC45O75419 566 aa12.89□□□□□ -0.35
CTSC-206ENST00000529974 F2P00734 622 aa12.89□□□□□ -0.35
CTSC-206ENST00000529974 SUPT20HL2P0C7V6 817 aa12.89□□□□□ -0.35
CTSC-206ENST00000529974 ZNF286BP0CG31 522 aa12.89□□□□□ -0.35
CTSC-206ENST00000529974 SMARCA1P28370 1054 aa12.89□□□□□ -0.35
CTSC-206ENST00000529974 CCND2P30279 289 aa12.89□□□□□ -0.35
CTSC-206ENST00000529974 PBX2P40425 430 aa12.89□□□□□ -0.35
CTSC-206ENST00000529974 MRPS9P82933 396 aaKnown RBP12.89□□□□□ -0.35
CTSC-206ENST00000529974 SP2Q02086 613 aa12.89□□□□□ -0.35
CTSC-206ENST00000529974 SEMA3FQ13275 785 aa12.89□□□□□ -0.35
CTSC-206ENST00000529974 GDF6Q6KF10 455 aaPredicted RBP12.89□□□□□ -0.35
CTSC-206ENST00000529974 NFXL1Q6ZNB6 911 aa12.89□□□□□ -0.35
CTSC-206ENST00000529974 SESTD1Q86VW0 696 aa12.89□□□□□ -0.35
CTSC-206ENST00000529974 SGMS1Q86VZ5 419 aa12.89□□□□□ -0.35
CTSC-206ENST00000529974 RASEFQ8IZ41 740 aa12.89□□□□□ -0.35
CTSC-206ENST00000529974 CMTR1Q8N1G2 835 aaKnown RBP12.89□□□□□ -0.35
CTSC-206ENST00000529974 MYLIPQ8WY64 445 aa12.89□□□□□ -0.35
CTSC-206ENST00000529974 RRP36Q96EU6 259 aaKnown RBP12.89□□□□□ -0.35
CTSC-206ENST00000529974 ZFP91Q96JP5 570 aaPredicted RBP12.89□□□□□ -0.35
CTSC-206ENST00000529974 PBX4Q9BYU1 374 aa12.89□□□□□ -0.35
CTSC-206ENST00000529974 HAS3O00219 553 aa12.88□□□□□ -0.35
CTSC-206ENST00000529974 PIK3CDO00329 1044 aa12.88□□□□□ -0.35
CTSC-206ENST00000529974 PITPNM1O00562 1244 aa12.88□□□□□ -0.35
CTSC-206ENST00000529974 MEIS2O14770 477 aa12.88□□□□□ -0.35
CTSC-206ENST00000529974 SORBS3O60504 671 aa12.88□□□□□ -0.35
CTSC-206ENST00000529974 GGPS1O95749 300 aa12.88□□□□□ -0.35
CTSC-206ENST00000529974 LAMC2Q13753 1193 aa12.88□□□□□ -0.35
CTSC-206ENST00000529974 DGKDQ16760 1214 aa12.88□□□□□ -0.35
CTSC-206ENST00000529974 HSDL1Q3SXM5 330 aa12.88□□□□□ -0.35
CTSC-206ENST00000529974 CELF3Q5SZQ8 465 aaKnown RBP12.88□□□□□ -0.35
CTSC-206ENST00000529974 MYSM1Q5VVJ2 828 aa12.88□□□□□ -0.35
CTSC-206ENST00000529974 TMTC3Q6ZXV5 915 aa12.88□□□□□ -0.35
CTSC-206ENST00000529974 OTOP2Q7RTS6 562 aa12.88□□□□□ -0.35
CTSC-206ENST00000529974 MICU3Q86XE3 530 aa12.88□□□□□ -0.35
CTSC-206ENST00000529974 DHX38Q92620 1227 aaKnown RBP12.88□□□□□ -0.35
Retrieved 100 of 20,778 RNA–protein pairs in 38.1 ms