RNA–Protein interactions for RNA: ENST00000529828.5

PTPRC-213, Transcript of protein tyrosine phosphatase, receptor type C, humanhuman

TSL 1 (best)

Gene PTPRC, Length 2,336 nt, Biotype non stop decay, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPRC-213ENST00000529828 TRAF7Q6Q0C0 670 aa4.18□□□□□ -1.74
PTPRC-213ENST00000529828 FAM178BQ8IXR5 827 aa4.18□□□□□ -1.74
PTPRC-213ENST00000529828 PHOSPHO2Q8TCD6 241 aa4.18□□□□□ -1.74
PTPRC-213ENST00000529828 STAG1Q8WVM7 1258 aa4.18□□□□□ -1.74
PTPRC-213ENST00000529828 MKL1Q969V6 931 aa4.18□□□□□ -1.74
PTPRC-213ENST00000529828 FBXL18Q96ME1 805 aa4.18□□□□□ -1.74
PTPRC-213ENST00000529828 CRBNQ96SW2 442 aa4.18□□□□□ -1.74
PTPRC-213ENST00000529828 PHOX2BQ99453 314 aa4.18□□□□□ -1.74
PTPRC-213ENST00000529828 C17orf80Q9BSJ5 609 aa4.18□□□□□ -1.74
PTPRC-213ENST00000529828 SUGCTQ9HAC7 445 aa4.18□□□□□ -1.74
PTPRC-213ENST00000529828 INCENPQ9NQS7 918 aa4.18□□□□□ -1.74
PTPRC-213ENST00000529828 PRR12Q9ULL5 1215 aa4.18□□□□□ -1.74
PTPRC-213ENST00000529828 STX8Q9UNK0 236 aa4.18□□□□□ -1.74
PTPRC-213ENST00000529828 DNAH14Q0VDD8 3507 aa4.18□□□□□ -1.74
PTPRC-213ENST00000529828 LCTP09848 1927 aa4.18□□□□□ -1.74
PTPRC-213ENST00000529828 FRMPD2Q68DX3 1309 aaPredicted RBP4.18□□□□□ -1.74
PTPRC-213ENST00000529828 ZFP91-CNTFA0A0A6YYC7 529 aaPredicted RBP4.18□□□□□ -1.74
PTPRC-213ENST00000529828 LINC01553A4QN01 128 aa4.18□□□□□ -1.74
PTPRC-213ENST00000529828 ARIH2O95376 493 aa4.18□□□□□ -1.74
PTPRC-213ENST00000529828 RFC2P35250 354 aa4.18□□□□□ -1.74
PTPRC-213ENST00000529828 GPNMBQ14956 572 aa4.18□□□□□ -1.74
PTPRC-213ENST00000529828 PPP2R5BQ15173 497 aa4.18□□□□□ -1.74
PTPRC-213ENST00000529828 CLUL1Q15846 466 aa4.18□□□□□ -1.74
PTPRC-213ENST00000529828 PTGISQ16647 500 aa4.18□□□□□ -1.74
PTPRC-213ENST00000529828 TKFCQ3LXA3 575 aa4.18□□□□□ -1.74
PTPRC-213ENST00000529828 TTBK2Q6IQ55 1244 aa4.18□□□□□ -1.74
PTPRC-213ENST00000529828 GDF6Q6KF10 455 aaPredicted RBP4.18□□□□□ -1.74
PTPRC-213ENST00000529828 ZSCAN25Q6NSZ9 544 aa4.18□□□□□ -1.74
PTPRC-213ENST00000529828 CHST3Q7LGC8 479 aa4.18□□□□□ -1.74
PTPRC-213ENST00000529828 FAM160B2Q86V87 743 aa4.18□□□□□ -1.74
PTPRC-213ENST00000529828 PTCD2Q8WV60 388 aaKnown RBP4.18□□□□□ -1.74
PTPRC-213ENST00000529828 DHX38Q92620 1227 aaKnown RBP4.18□□□□□ -1.74
PTPRC-213ENST00000529828 WNT2BQ93097 391 aa4.18□□□□□ -1.74
PTPRC-213ENST00000529828 ZFP91Q96JP5 570 aaPredicted RBP4.18□□□□□ -1.74
PTPRC-213ENST00000529828 SEC62Q99442 399 aaKnown RBP4.18□□□□□ -1.74
PTPRC-213ENST00000529828 PTPRSQ13332 1948 aa4.18□□□□□ -1.74
PTPRC-213ENST00000529828 TANC1Q9C0D5 1861 aa4.18□□□□□ -1.74
PTPRC-213ENST00000529828 CACNA1AO00555 2505 aa4.18□□□□□ -1.74
PTPRC-213ENST00000529828 PLIN4Q96Q06 1357 aa4.17□□□□□ -1.74
PTPRC-213ENST00000529828 SORBS3O60504 671 aa4.17□□□□□ -1.74
PTPRC-213ENST00000529828 NBNO60934 754 aa4.17□□□□□ -1.74
PTPRC-213ENST00000529828 BAIAP3O94812 1187 aa4.17□□□□□ -1.74
PTPRC-213ENST00000529828 CTDSPL2Q05D32 466 aa4.17□□□□□ -1.74
PTPRC-213ENST00000529828 PDE4BQ07343 736 aa4.17□□□□□ -1.74
PTPRC-213ENST00000529828 PDE4DQ08499 809 aa4.17□□□□□ -1.74
PTPRC-213ENST00000529828 BFSP2Q13515 415 aa4.17□□□□□ -1.74
PTPRC-213ENST00000529828 LEXMQ3ZCV2 418 aa4.17□□□□□ -1.74
PTPRC-213ENST00000529828 LIN28BQ6ZN17 250 aaKnown RBP eCLIP4.17□□□□□ -1.749e-7■■■□□ 17.7
PTPRC-213ENST00000529828 HFE2Q6ZVN8 426 aa4.17□□□□□ -1.74
PTPRC-213ENST00000529828 LRRC8DQ7L1W4 858 aa4.17□□□□□ -1.74
PTPRC-213ENST00000529828 RPAP2Q8IXW5 612 aaPredicted RBP4.17□□□□□ -1.74
PTPRC-213ENST00000529828 IFNL3Q8IZI9 196 aa4.17□□□□□ -1.74
PTPRC-213ENST00000529828 FBXO22Q8NEZ5 403 aa4.17□□□□□ -1.74
PTPRC-213ENST00000529828 NEDD1Q8NHV4 660 aa4.17□□□□□ -1.74
PTPRC-213ENST00000529828 CHURC1Q8WUH1 139 aa4.17□□□□□ -1.74
PTPRC-213ENST00000529828 APPBP2Q92624 585 aa4.17□□□□□ -1.74
PTPRC-213ENST00000529828 WNT8BQ93098 351 aa4.17□□□□□ -1.74
PTPRC-213ENST00000529828 GMCL1Q96IK5 515 aa4.17□□□□□ -1.74
PTPRC-213ENST00000529828 SNX27Q96L92 541 aa4.17□□□□□ -1.74
PTPRC-213ENST00000529828 TGS1Q96RS0 853 aaKnown RBP4.17□□□□□ -1.74
PTPRC-213ENST00000529828 CTAGE1Q96RT6 745 aa4.17□□□□□ -1.74
PTPRC-213ENST00000529828 KCNK17Q96T54 332 aa4.17□□□□□ -1.74
PTPRC-213ENST00000529828 SEZ6LQ9BYH1 1024 aa4.17□□□□□ -1.74
PTPRC-213ENST00000529828 GPCPD1Q9NPB8 672 aa4.17□□□□□ -1.74
PTPRC-213ENST00000529828 Q9Y3F1 56 aa4.17□□□□□ -1.74
PTPRC-213ENST00000529828 ZDBF2Q9HCK1 2354 aa4.17□□□□□ -1.74
PTPRC-213ENST00000529828 SPTBN4Q9H254 2564 aa4.17□□□□□ -1.74
PTPRC-213ENST00000529828 PPAN-P2RY11A0A0B4J1V8 794 aaPredicted RBP4.17□□□□□ -1.74
PTPRC-213ENST00000529828 GRXCR2A6NFK2 248 aa4.17□□□□□ -1.74
PTPRC-213ENST00000529828 TSPY2A6NKD2 308 aa4.17□□□□□ -1.74
PTPRC-213ENST00000529828 RNF113AO15541 343 aaKnown RBP4.17□□□□□ -1.74
PTPRC-213ENST00000529828 DCXO43602 365 aa4.17□□□□□ -1.74
PTPRC-213ENST00000529828 RAB11FIP3O75154 756 aa4.17□□□□□ -1.74
PTPRC-213ENST00000529828 HMMRO75330 724 aa4.17□□□□□ -1.74
PTPRC-213ENST00000529828 GJB5O95377 273 aa4.17□□□□□ -1.74
PTPRC-213ENST00000529828 ICAM1P05362 532 aa4.17□□□□□ -1.74
PTPRC-213ENST00000529828 TXNP10599 105 aaKnown RBP4.17□□□□□ -1.74
PTPRC-213ENST00000529828 SELPP16109 830 aa4.17□□□□□ -1.74
PTPRC-213ENST00000529828 ERVK-21P61565 698 aa4.17□□□□□ -1.74
PTPRC-213ENST00000529828 ZNF200P98182 395 aaPredicted RBP4.17□□□□□ -1.74
PTPRC-213ENST00000529828 PPARAQ07869 468 aa4.17□□□□□ -1.74
PTPRC-213ENST00000529828 LY6KQ17RY6 165 aa4.17□□□□□ -1.74
PTPRC-213ENST00000529828 BRDTQ58F21 947 aaPredicted RBP4.17□□□□□ -1.74
PTPRC-213ENST00000529828 NFRKBQ6P4R8 1299 aa4.17□□□□□ -1.74
PTPRC-213ENST00000529828 CNKSR3Q6P9H4 555 aa4.17□□□□□ -1.74
PTPRC-213ENST00000529828 NYAP1Q6ZVC0 841 aa4.17□□□□□ -1.74
PTPRC-213ENST00000529828 MYOCDQ8IZQ8 938 aa4.17□□□□□ -1.74
PTPRC-213ENST00000529828 MORC4Q8TE76 937 aa4.17□□□□□ -1.74
PTPRC-213ENST00000529828 AFAP1L1Q8TED9 768 aa4.17□□□□□ -1.74
PTPRC-213ENST00000529828 AFG1LQ8WV93 481 aa4.17□□□□□ -1.74
PTPRC-213ENST00000529828 RAD9AQ99638 391 aa4.17□□□□□ -1.74
PTPRC-213ENST00000529828 ZNF287Q9HBT7 754 aa4.17□□□□□ -1.74
PTPRC-213ENST00000529828 ADD3Q9UEY8 706 aaKnown RBP4.17□□□□□ -1.74
PTPRC-213ENST00000529828 DCHS1Q96JQ0 3298 aa4.17□□□□□ -1.74
PTPRC-213ENST00000529828 SCN10AQ9Y5Y9 1956 aa4.17□□□□□ -1.74
PTPRC-213ENST00000529828 MYH7P12883 1935 aa4.17□□□□□ -1.74
PTPRC-213ENST00000529828 MYO7AQ13402 2215 aa4.16□□□□□ -1.74
PTPRC-213ENST00000529828 RAD50Q92878 1312 aa4.16□□□□□ -1.74
PTPRC-213ENST00000529828 RBM47A0AV96 593 aaKnown RBP4.16□□□□□ -1.74
PTPRC-213ENST00000529828 A6NJR5 290 aa4.16□□□□□ -1.74
Retrieved 100 of 20,778 RNA–protein pairs in 14.9 ms