RNA–Protein interactions for RNA: ENST00000529545.1

VPS11-203, Transcript of VPS11, CORVET/HOPS core subunit, humanhuman

TSL 5

Gene VPS11, Length 576 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS11-203ENST00000529545 TXNP10599 105 aaKnown RBP10.6□□□□□ -0.71
VPS11-203ENST00000529545 PTGISQ16647 500 aa10.6□□□□□ -0.71
VPS11-203ENST00000529545 VARS2Q5ST30 1063 aaKnown RBP10.6□□□□□ -0.71
VPS11-203ENST00000529545 SYDE2Q5VT97 1194 aa10.6□□□□□ -0.71
VPS11-203ENST00000529545 LCTP09848 1927 aa10.6□□□□□ -0.71
VPS11-203ENST00000529545 REV3LO60673 3130 aa10.6□□□□□ -0.71
VPS11-203ENST00000529545 POTEB3A0JP26 581 aa10.59□□□□□ -0.71
VPS11-203ENST00000529545 PRR33A8MZF0 331 aa10.59□□□□□ -0.71
VPS11-203ENST00000529545 NMT2O60551 498 aa10.59□□□□□ -0.71
VPS11-203ENST00000529545 EFCAB14O75071 495 aa10.59□□□□□ -0.71
VPS11-203ENST00000529545 ARHGEF15O94989 841 aa10.59□□□□□ -0.71
VPS11-203ENST00000529545 ALADP13716 330 aa10.59□□□□□ -0.71
VPS11-203ENST00000529545 SELPP16109 830 aa10.59□□□□□ -0.71
VPS11-203ENST00000529545 SSTR3P32745 418 aaPredicted RBP10.59□□□□□ -0.71
VPS11-203ENST00000529545 SLC16A2P36021 539 aa10.59□□□□□ -0.71
VPS11-203ENST00000529545 WDR5P61964 334 aaKnown RBP10.59□□□□□ -0.71
VPS11-203ENST00000529545 CSPP1Q1MSJ5 1256 aa10.59□□□□□ -0.71
VPS11-203ENST00000529545 CNKSR3Q6P9H4 555 aa10.59□□□□□ -0.71
VPS11-203ENST00000529545 POTEBQ6S5H4 581 aa10.59□□□□□ -0.71
VPS11-203ENST00000529545 GJD3Q8N144 294 aa10.59□□□□□ -0.71
VPS11-203ENST00000529545 DNERQ8NFT8 737 aa10.59□□□□□ -0.71
VPS11-203ENST00000529545 GDPD5Q8WTR4 605 aa10.59□□□□□ -0.71
VPS11-203ENST00000529545 PPP1R13LQ8WUF5 828 aa10.59□□□□□ -0.71
VPS11-203ENST00000529545 BBXQ8WY36 941 aaPredicted RBP10.59□□□□□ -0.71
VPS11-203ENST00000529545 TGS1Q96RS0 853 aaKnown RBP10.59□□□□□ -0.71
VPS11-203ENST00000529545 SEC62Q99442 399 aaKnown RBP10.59□□□□□ -0.71
VPS11-203ENST00000529545 RAD9AQ99638 391 aa10.59□□□□□ -0.71
VPS11-203ENST00000529545 FSD1Q9BTV5 496 aa10.59□□□□□ -0.71
VPS11-203ENST00000529545 UBE2ZQ9H832 354 aaPredicted RBP10.59□□□□□ -0.71
VPS11-203ENST00000529545 IL17RBQ9NRM6 502 aa10.59□□□□□ -0.71
VPS11-203ENST00000529545 TOMM22Q9NS69 142 aa10.59□□□□□ -0.71
VPS11-203ENST00000529545 MTUS1Q9ULD2 1270 aa10.59□□□□□ -0.71
VPS11-203ENST00000529545 PCDHGA4Q9Y5G9 962 aa10.59□□□□□ -0.71
VPS11-203ENST00000529545 COL4A4P53420 1690 aaPredicted RBP10.59□□□□□ -0.71
VPS11-203ENST00000529545 TRIP12Q14669 1992 aaPredicted RBP10.59□□□□□ -0.71
VPS11-203ENST00000529545 ABHD14A-ACY1A0A1B0GW23 586 aa10.58□□□□□ -0.72
VPS11-203ENST00000529545 LCHNA4D1U4 455 aa10.58□□□□□ -0.72
VPS11-203ENST00000529545 TOP1P11387 765 aaKnown RBP10.58□□□□□ -0.72
VPS11-203ENST00000529545 RPS6P62753 249 aaKnown RBP10.58□□□□□ -0.72
VPS11-203ENST00000529545 CTDSPL2Q05D32 466 aa10.58□□□□□ -0.72
VPS11-203ENST00000529545 IKBKEQ14164 716 aa10.58□□□□□ -0.72
VPS11-203ENST00000529545 LEXMQ3ZCV2 418 aa10.58□□□□□ -0.72
VPS11-203ENST00000529545 TSHZ3Q63HK5 1081 aa10.58□□□□□ -0.72
VPS11-203ENST00000529545 TTBK2Q6IQ55 1244 aa10.58□□□□□ -0.72
VPS11-203ENST00000529545 BTNL9Q6UXG8 535 aa10.58□□□□□ -0.72
VPS11-203ENST00000529545 SLC30A10Q6XR72 485 aa10.58□□□□□ -0.72
VPS11-203ENST00000529545 LRRC8DQ7L1W4 858 aa10.58□□□□□ -0.72
VPS11-203ENST00000529545 ALYREFQ86V81 257 aaKnown RBP10.58□□□□□ -0.72
VPS11-203ENST00000529545 PLPP6Q8IY26 295 aa10.58□□□□□ -0.72
VPS11-203ENST00000529545 KHSRPQ92945 711 aaKnown RBP eCLIP10.58□□□□□ -0.72
VPS11-203ENST00000529545 UIMC1Q96RL1 719 aa10.58□□□□□ -0.72
VPS11-203ENST00000529545 GPCPD1Q9NPB8 672 aa10.58□□□□□ -0.72
VPS11-203ENST00000529545 C11orf16Q9NQ32 467 aa10.58□□□□□ -0.72
VPS11-203ENST00000529545 DDX52Q9Y2R4 599 aaKnown RBP eCLIP10.58□□□□□ -0.72
VPS11-203ENST00000529545 TET1Q8NFU7 2136 aa10.57□□□□□ -0.72
VPS11-203ENST00000529545 GJB5O95377 273 aa10.57□□□□□ -0.72
VPS11-203ENST00000529545 CASTP20810 708 aaKnown RBP10.57□□□□□ -0.72
VPS11-203ENST00000529545 KCNA5P22460 613 aa10.57□□□□□ -0.72
VPS11-203ENST00000529545 EDNRBP24530 442 aa10.57□□□□□ -0.72
VPS11-203ENST00000529545 ERVK-21P61565 698 aa10.57□□□□□ -0.72
VPS11-203ENST00000529545 DSG2Q14126 1118 aa10.57□□□□□ -0.72
VPS11-203ENST00000529545 PUS10Q3MIT2 529 aaKnown RBP10.57□□□□□ -0.72
VPS11-203ENST00000529545 ZMYM1Q5SVZ6 1142 aa10.57□□□□□ -0.72
VPS11-203ENST00000529545 RASGRP2Q7LDG7 609 aa10.57□□□□□ -0.72
VPS11-203ENST00000529545 SESTD1Q86VW0 696 aa10.57□□□□□ -0.72
VPS11-203ENST00000529545 FAM178BQ8IXR5 827 aa10.57□□□□□ -0.72
VPS11-203ENST00000529545 C7orf31Q8N865 590 aa10.57□□□□□ -0.72
VPS11-203ENST00000529545 AFG1LQ8WV93 481 aa10.57□□□□□ -0.72
VPS11-203ENST00000529545 CLEC4DQ8WXI8 215 aa10.57□□□□□ -0.72
VPS11-203ENST00000529545 COPS5Q92905 334 aa10.57□□□□□ -0.72
VPS11-203ENST00000529545 SUGCTQ9HAC7 445 aa10.57□□□□□ -0.72
VPS11-203ENST00000529545 CD320Q9NPF0 282 aa10.57□□□□□ -0.72
VPS11-203ENST00000529545 CTNNA3Q9UI47 895 aa10.57□□□□□ -0.72
VPS11-203ENST00000529545 FRMPD2Q68DX3 1309 aaPredicted RBP10.57□□□□□ -0.72
VPS11-203ENST00000529545 TTC41PQ6P2S7 1318 aa10.57□□□□□ -0.72
VPS11-203ENST00000529545 PPAN-P2RY11A0A0B4J1V8 794 aaPredicted RBP10.56□□□□□ -0.72
VPS11-203ENST00000529545 LINC01553A4QN01 128 aa10.56□□□□□ -0.72
VPS11-203ENST00000529545 GH1P01241 217 aa10.56□□□□□ -0.72
VPS11-203ENST00000529545 PDE4AP27815 886 aa10.56□□□□□ -0.72
VPS11-203ENST00000529545 DEFB103AP81534 67 aa10.56□□□□□ -0.72
VPS11-203ENST00000529545 DGKDQ16760 1214 aa10.56□□□□□ -0.72
VPS11-203ENST00000529545 PTPROQ16827 1216 aa10.56□□□□□ -0.72
VPS11-203ENST00000529545 RRP12Q5JTH9 1297 aaKnown RBP10.56□□□□□ -0.72
VPS11-203ENST00000529545 PTCRAQ6ISU1 281 aaPredicted RBP10.56□□□□□ -0.72
VPS11-203ENST00000529545 GDF6Q6KF10 455 aaPredicted RBP10.56□□□□□ -0.72
VPS11-203ENST00000529545 FAM117BQ6P1L5 589 aa10.56□□□□□ -0.72
VPS11-203ENST00000529545 SEPT14Q6ZU15 432 aa10.56□□□□□ -0.72
VPS11-203ENST00000529545 SPRED2Q7Z698 418 aa10.56□□□□□ -0.72
VPS11-203ENST00000529545 TMCO2Q7Z6W1 182 aaPredicted RBP10.56□□□□□ -0.72
VPS11-203ENST00000529545 PTCD2Q8WV60 388 aaKnown RBP10.56□□□□□ -0.72
VPS11-203ENST00000529545 KATNAL1Q9BW62 490 aa10.56□□□□□ -0.72
VPS11-203ENST00000529545 DCTPP1Q9H773 170 aa10.56□□□□□ -0.72
VPS11-203ENST00000529545 INCENPQ9NQS7 918 aa10.56□□□□□ -0.72
VPS11-203ENST00000529545 ANAPC4Q9UJX5 808 aa10.56□□□□□ -0.72
VPS11-203ENST00000529545 FAM50BQ9Y247 325 aa10.56□□□□□ -0.72
VPS11-203ENST00000529545 INSL6Q9Y581 213 aa10.56□□□□□ -0.72
VPS11-203ENST00000529545 PTPRSQ13332 1948 aa10.56□□□□□ -0.72
VPS11-203ENST00000529545 SIP14410 1827 aa10.56□□□□□ -0.72
VPS11-203ENST00000529545 WDR19Q8NEZ3 1342 aa10.56□□□□□ -0.72
VPS11-203ENST00000529545 XIRP2A4UGR9 3374 aa10.56□□□□□ -0.72
Retrieved 100 of 20,778 RNA–protein pairs in 17.5 ms