RNA–Protein interactions for RNA: ENST00000529214.5

ATPAF1-209, Transcript of ATP synthase mitochondrial F1 complex assembly factor 1, humanhuman

TSL 2

Gene ATPAF1, Length 1,471 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ATPAF1-209ENST00000529214 CTCFLQ8NI51 663 aaPredicted RBP7.24□□□□□ -1.25
ATPAF1-209ENST00000529214 BRF1Q92994 677 aa7.24□□□□□ -1.25
ATPAF1-209ENST00000529214 ARMC5Q96C12 935 aa7.24□□□□□ -1.25
ATPAF1-209ENST00000529214 TRERF1Q96PN7 1200 aa7.24□□□□□ -1.25
ATPAF1-209ENST00000529214 MMP19Q99542 508 aa7.24□□□□□ -1.25
ATPAF1-209ENST00000529214 LZTS2Q9BRK4 669 aa7.24□□□□□ -1.25
ATPAF1-209ENST00000529214 MYL10Q9BUA6 226 aa7.24□□□□□ -1.25
ATPAF1-209ENST00000529214 ALDH8A1Q9H2A2 487 aaPredicted RBP7.24□□□□□ -1.25
ATPAF1-209ENST00000529214 CUEDC1Q9NWM3 386 aaPredicted RBP7.24□□□□□ -1.25
ATPAF1-209ENST00000529214 FBXO40Q9UH90 709 aa7.24□□□□□ -1.25
ATPAF1-209ENST00000529214 PARP14Q460N5 1801 aa7.24□□□□□ -1.25
ATPAF1-209ENST00000529214 DNAJC25-GNG10A0A024R161 153 aa7.24□□□□□ -1.25
ATPAF1-209ENST00000529214 KLF18A0A0U1RQI7 1052 aa7.24□□□□□ -1.25
ATPAF1-209ENST00000529214 ZBTB5O15062 677 aa7.24□□□□□ -1.25
ATPAF1-209ENST00000529214 ZBTB43O43298 467 aa7.24□□□□□ -1.25
ATPAF1-209ENST00000529214 IGHA2P01877 340 aa7.24□□□□□ -1.25
ATPAF1-209ENST00000529214 ALAS1P13196 640 aa7.24□□□□□ -1.25
ATPAF1-209ENST00000529214 ELNP15502 786 aa7.24□□□□□ -1.25
ATPAF1-209ENST00000529214 RXRAP19793 462 aa7.24□□□□□ -1.25
ATPAF1-209ENST00000529214 RCAN1P53805 252 aa7.24□□□□□ -1.25
ATPAF1-209ENST00000529214 APOBRQ0VD83 1088 aa7.24□□□□□ -1.25
ATPAF1-209ENST00000529214 TOB2Q14106 344 aaPredicted RBP7.24□□□□□ -1.25
ATPAF1-209ENST00000529214 KCTD2Q14681 263 aa7.24□□□□□ -1.25
ATPAF1-209ENST00000529214 PPP2R5BQ15173 497 aa7.24□□□□□ -1.25
ATPAF1-209ENST00000529214 ZNF792Q3KQV3 632 aa7.24□□□□□ -1.25
ATPAF1-209ENST00000529214 SLC9C1Q4G0N8 1177 aa7.24□□□□□ -1.25
ATPAF1-209ENST00000529214 ARSIQ5FYB1 569 aa7.24□□□□□ -1.25
ATPAF1-209ENST00000529214 MUM1L1Q5H9M0 696 aa7.24□□□□□ -1.25
ATPAF1-209ENST00000529214 ARMCX6Q7L4S7 300 aa7.24□□□□□ -1.25
ATPAF1-209ENST00000529214 TRMT44Q8IYL2 757 aaKnown RBP7.24□□□□□ -1.25
ATPAF1-209ENST00000529214 SRBD1Q8N5C6 995 aaKnown RBP7.24□□□□□ -1.25
ATPAF1-209ENST00000529214 NPLOC4Q8TAT6 608 aa7.24□□□□□ -1.25
ATPAF1-209ENST00000529214 SH3TC2Q8TF17 1288 aa7.24□□□□□ -1.25
ATPAF1-209ENST00000529214 CLP1Q92989 425 aaKnown RBP7.24□□□□□ -1.25
ATPAF1-209ENST00000529214 DDX11Q96FC9 970 aa7.24□□□□□ -1.25
ATPAF1-209ENST00000529214 SPZ1Q9BXG8 430 aa7.24□□□□□ -1.25
ATPAF1-209ENST00000529214 UPF3BQ9BZI7 483 aaKnown RBP7.24□□□□□ -1.25
ATPAF1-209ENST00000529214 ACAD9Q9H845 621 aa7.24□□□□□ -1.25
ATPAF1-209ENST00000529214 SLC5A4Q9NY91 659 aa7.24□□□□□ -1.25
ATPAF1-209ENST00000529214 CCPG1Q9ULG6 757 aa7.24□□□□□ -1.25
ATPAF1-209ENST00000529214 DIS3Q9Y2L1 958 aaKnown RBP7.24□□□□□ -1.25
ATPAF1-209ENST00000529214 HTTP42858 3142 aa7.23□□□□□ -1.25
ATPAF1-209ENST00000529214 A0A0G2JMZ2 1700 aa7.23□□□□□ -1.25
ATPAF1-209ENST00000529214 ZSWIM8A7E2V4 1837 aa7.23□□□□□ -1.25
ATPAF1-209ENST00000529214 CENPFP49454 3210 aa7.23□□□□□ -1.25
ATPAF1-209ENST00000529214 DOCK3Q8IZD9 2030 aa7.23□□□□□ -1.25
ATPAF1-209ENST00000529214 PNMA6FA0A0J9YX94 578 aa7.23□□□□□ -1.25
ATPAF1-209ENST00000529214 VGLL3A8MV65 326 aa7.23□□□□□ -1.25
ATPAF1-209ENST00000529214 DHX16O60231 1041 aaKnown RBP7.23□□□□□ -1.25
ATPAF1-209ENST00000529214 PLEKHA8P1O95397 391 aa7.23□□□□□ -1.25
ATPAF1-209ENST00000529214 PGK2P07205 417 aa7.23□□□□□ -1.25
ATPAF1-209ENST00000529214 PDIA3P30101 505 aaKnown RBP7.23□□□□□ -1.25
ATPAF1-209ENST00000529214 CDC37Q16543 378 aaPredicted RBP7.23□□□□□ -1.25
ATPAF1-209ENST00000529214 CCL14Q16627 93 aa7.23□□□□□ -1.25
ATPAF1-209ENST00000529214 QRICH1Q2TAL8 776 aa7.23□□□□□ -1.25
ATPAF1-209ENST00000529214 TMEM92Q6UXU6 159 aa7.23□□□□□ -1.25
ATPAF1-209ENST00000529214 MICU3Q86XE3 530 aa7.23□□□□□ -1.25
ATPAF1-209ENST00000529214 FBXO11Q86XK2 927 aa7.23□□□□□ -1.25
ATPAF1-209ENST00000529214 RAB11FIP4Q86YS3 637 aa7.23□□□□□ -1.25
ATPAF1-209ENST00000529214 CCDC144CPQ8IYA2 1237 aa7.23□□□□□ -1.25
ATPAF1-209ENST00000529214 CMTR1Q8N1G2 835 aaKnown RBP7.23□□□□□ -1.25
ATPAF1-209ENST00000529214 ANKRD35Q8N283 1001 aa7.23□□□□□ -1.25
ATPAF1-209ENST00000529214 CLEC4DQ8WXI8 215 aa7.23□□□□□ -1.25
ATPAF1-209ENST00000529214 PIK3R5Q8WYR1 880 aa7.23□□□□□ -1.25
ATPAF1-209ENST00000529214 TRIB2Q92519 343 aa7.23□□□□□ -1.25
ATPAF1-209ENST00000529214 ZNF274Q96GC6 653 aaPredicted RBP7.23□□□□□ -1.25
ATPAF1-209ENST00000529214 ZNF333Q96JL9 665 aa7.23□□□□□ -1.25
ATPAF1-209ENST00000529214 PIGSQ96S52 555 aa7.23□□□□□ -1.25
ATPAF1-209ENST00000529214 APBA2Q99767 749 aa7.23□□□□□ -1.25
ATPAF1-209ENST00000529214 AMNQ9BXJ7 453 aa7.23□□□□□ -1.25
ATPAF1-209ENST00000529214 C22orf23Q9BZE7 217 aa7.23□□□□□ -1.25
ATPAF1-209ENST00000529214 MAF1Q9H063 256 aa7.23□□□□□ -1.25
ATPAF1-209ENST00000529214 A1CFQ9NQ94 594 aaKnown RBP7.23□□□□□ -1.25
ATPAF1-209ENST00000529214 HOMER2Q9NSB8 354 aa7.23□□□□□ -1.25
ATPAF1-209ENST00000529214 RNF146Q9NTX7 359 aa7.23□□□□□ -1.25
ATPAF1-209ENST00000529214 PDRG1Q9NUG6 133 aa7.23□□□□□ -1.25
ATPAF1-209ENST00000529214 RBM28Q9NW13 759 aaKnown RBP7.23□□□□□ -1.25
ATPAF1-209ENST00000529214 FLRT1Q9NZU1 646 aa7.23□□□□□ -1.25
ATPAF1-209ENST00000529214 WDR3Q9UNX4 943 aaKnown RBP eCLIP7.23□□□□□ -1.25
ATPAF1-209ENST00000529214 MGAMO43451 1857 aa7.22□□□□□ -1.25
ATPAF1-209ENST00000529214 CCDC196A0A1B0GTZ2 297 aa7.22□□□□□ -1.25
ATPAF1-209ENST00000529214 SCAMP3O14828 347 aaKnown RBP7.22□□□□□ -1.25
ATPAF1-209ENST00000529214 PPP1R11O60927 126 aaPredicted RBP7.22□□□□□ -1.25
ATPAF1-209ENST00000529214 HMGCRP04035 888 aa7.22□□□□□ -1.25
ATPAF1-209ENST00000529214 TAL1P17542 331 aaPredicted RBP7.22□□□□□ -1.25
ATPAF1-209ENST00000529214 CDC27P30260 824 aa7.22□□□□□ -1.25
ATPAF1-209ENST00000529214 ADD1P35611 737 aaKnown RBP7.22□□□□□ -1.25
ATPAF1-209ENST00000529214 FOSBP53539 338 aa7.22□□□□□ -1.25
ATPAF1-209ENST00000529214 UBXN2AP68543 259 aa7.22□□□□□ -1.25
ATPAF1-209ENST00000529214 FUT2Q10981 343 aa7.22□□□□□ -1.25
ATPAF1-209ENST00000529214 TRAF1Q13077 416 aa7.22□□□□□ -1.25
ATPAF1-209ENST00000529214 MTFR1Q15390 333 aa7.22□□□□□ -1.25
ATPAF1-209ENST00000529214 RTN1Q16799 776 aa7.22□□□□□ -1.25
ATPAF1-209ENST00000529214 USH1GQ495M9 461 aa7.22□□□□□ -1.25
ATPAF1-209ENST00000529214 MAP3K21Q5TCX8 1036 aa7.22□□□□□ -1.25
ATPAF1-209ENST00000529214 OLFML2BQ68BL8 750 aa7.22□□□□□ -1.25
ATPAF1-209ENST00000529214 TMTC3Q6ZXV5 915 aa7.22□□□□□ -1.25
ATPAF1-209ENST00000529214 HOMER1Q86YM7 354 aa7.22□□□□□ -1.25
ATPAF1-209ENST00000529214 FAM133AQ8N9E0 248 aa7.22□□□□□ -1.25
ATPAF1-209ENST00000529214 TBC1D5Q92609 795 aa7.22□□□□□ -1.25
Retrieved 100 of 20,778 RNA–protein pairs in 28.4 ms