RNA–Protein interactions for RNA: ENST00000529002.2

SSRP1-204, Transcript of structure specific recognition protein 1, humanhuman

TSL 5

Gene SSRP1, Length 648 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SSRP1-204ENST00000529002 TBC1D5Q92609 795 aa22.37■■□□□ 1.17
SSRP1-204ENST00000529002 TMEM47Q9BQJ4 181 aa22.37■■□□□ 1.17
SSRP1-204ENST00000529002 ALG1Q9BT22 464 aa22.37■■□□□ 1.17
SSRP1-204ENST00000529002 MYH6P13533 1939 aa22.36■■□□□ 1.17
SSRP1-204ENST00000529002 ABHD14A-ACY1A0A1B0GW23 586 aa22.36■■□□□ 1.17
SSRP1-204ENST00000529002 ALADP13716 330 aa22.36■■□□□ 1.17
SSRP1-204ENST00000529002 PPP4R3BQ5MIZ7 849 aa22.36■■□□□ 1.17
SSRP1-204ENST00000529002 ZNF618Q5T7W0 954 aa22.36■■□□□ 1.17
SSRP1-204ENST00000529002 SESTD1Q86VW0 696 aa22.36■■□□□ 1.17
SSRP1-204ENST00000529002 WDFY4Q6ZS81 3184 aa22.36■■□□□ 1.17
SSRP1-204ENST00000529002 VPS53Q5VIR6 699 aa22.35■■□□□ 1.17
SSRP1-204ENST00000529002 EP400NLQ6ZTU2 488 aa22.35■■□□□ 1.17
SSRP1-204ENST00000529002 NEK9Q8TD19 979 aa22.35■■□□□ 1.17
SSRP1-204ENST00000529002 CPVLQ9H3G5 476 aa22.35■■□□□ 1.17
SSRP1-204ENST00000529002 GTF2IRD1Q9UHL9 959 aa22.35■■□□□ 1.17
SSRP1-204ENST00000529002 DCXO43602 365 aa22.34■■□□□ 1.17
SSRP1-204ENST00000529002 RBL2Q08999 1139 aa22.34■■□□□ 1.17
SSRP1-204ENST00000529002 IKBKEQ14164 716 aa22.34■■□□□ 1.17
SSRP1-204ENST00000529002 HIC1Q14526 733 aa22.34■■□□□ 1.17
SSRP1-204ENST00000529002 TRIM71Q2Q1W2 868 aaKnown RBP22.34■■□□□ 1.17
SSRP1-204ENST00000529002 USH1GQ495M9 461 aa22.34■■□□□ 1.17
SSRP1-204ENST00000529002 RRP12Q5JTH9 1297 aaKnown RBP22.34■■□□□ 1.17
SSRP1-204ENST00000529002 C20orf194Q5TEA3 1177 aa22.34■■□□□ 1.17
SSRP1-204ENST00000529002 DNERQ8NFT8 737 aa22.34■■□□□ 1.17
SSRP1-204ENST00000529002 OTUD7AQ8TE49 926 aaPredicted RBP22.34■■□□□ 1.17
SSRP1-204ENST00000529002 GPATCH3Q96I76 525 aa22.34■■□□□ 1.17
SSRP1-204ENST00000529002 FSD1Q9BTV5 496 aa22.34■■□□□ 1.17
SSRP1-204ENST00000529002 TOMM22Q9NS69 142 aa22.34■■□□□ 1.17
SSRP1-204ENST00000529002 POTEB3A0JP26 581 aa22.33■■□□□ 1.17
SSRP1-204ENST00000529002 GH1P01241 217 aa22.33■■□□□ 1.17
SSRP1-204ENST00000529002 ZNF286BP0CG31 522 aa22.33■■□□□ 1.17
SSRP1-204ENST00000529002 PDHBP11177 359 aa22.33■■□□□ 1.17
SSRP1-204ENST00000529002 PSEN2P49810 448 aa22.33■■□□□ 1.17
SSRP1-204ENST00000529002 POTEBQ6S5H4 581 aa22.33■■□□□ 1.17
SSRP1-204ENST00000529002 MRPL38Q96DV4 380 aaKnown RBP22.33■■□□□ 1.17
SSRP1-204ENST00000529002 TAAR1Q96RJ0 339 aa22.33■■□□□ 1.17
SSRP1-204ENST00000529002 COL20A1Q9P218 1284 aa22.33■■□□□ 1.17
SSRP1-204ENST00000529002 TOP1P11387 765 aaKnown RBP22.32■■□□□ 1.16
SSRP1-204ENST00000529002 CASTP20810 708 aaKnown RBP22.32■■□□□ 1.16
SSRP1-204ENST00000529002 TCEAL5Q5H9L2 206 aa22.32■■□□□ 1.16
SSRP1-204ENST00000529002 MYOCDQ8IZQ8 938 aa22.32■■□□□ 1.16
SSRP1-204ENST00000529002 C7orf31Q8N865 590 aa22.32■■□□□ 1.16
SSRP1-204ENST00000529002 PHOX2BQ99453 314 aa22.32■■□□□ 1.16
SSRP1-204ENST00000529002 MPHOSPH6Q99547 160 aaKnown RBP22.32■■□□□ 1.16
SSRP1-204ENST00000529002 TECTAO75443 2155 aa22.32■■□□□ 1.16
SSRP1-204ENST00000529002 ORC4O43929 436 aa22.31■■□□□ 1.16
SSRP1-204ENST00000529002 ZP2Q05996 745 aa22.31■■□□□ 1.16
SSRP1-204ENST00000529002 EPC2Q52LR7 807 aa22.31■■□□□ 1.16
SSRP1-204ENST00000529002 HFE2Q6ZVN8 426 aa22.31■■□□□ 1.16
SSRP1-204ENST00000529002 DBF4BQ8NFT6 615 aa22.31■■□□□ 1.16
SSRP1-204ENST00000529002 PI4K2BQ8TCG2 481 aa22.31■■□□□ 1.16
SSRP1-204ENST00000529002 OSBPL7Q9BZF2 842 aa22.31■■□□□ 1.16
SSRP1-204ENST00000529002 INSL6Q9Y581 213 aa22.31■■□□□ 1.16
SSRP1-204ENST00000529002 C5orf42Q9H799 3197 aa22.3■■□□□ 1.16
SSRP1-204ENST00000529002 SORBS3O60504 671 aa22.3■■□□□ 1.16
SSRP1-204ENST00000529002 LGR5O75473 907 aa22.3■■□□□ 1.16
SSRP1-204ENST00000529002 PARNO95453 639 aaKnown RBP22.3■■□□□ 1.16
SSRP1-204ENST00000529002 GOLGA8HP0CJ92 632 aa22.3■■□□□ 1.16
SSRP1-204ENST00000529002 ZNF543Q08ER8 600 aa22.3■■□□□ 1.16
SSRP1-204ENST00000529002 MKRN4PQ13434 485 aaPredicted RBP22.3■■□□□ 1.16
SSRP1-204ENST00000529002 MFSD10Q14728 455 aa22.3■■□□□ 1.16
SSRP1-204ENST00000529002 KIAA0753Q2KHM9 967 aa22.3■■□□□ 1.16
SSRP1-204ENST00000529002 BANK1Q8NDB2 785 aa22.3■■□□□ 1.16
SSRP1-204ENST00000529002 DCTPP1Q9H773 170 aa22.3■■□□□ 1.16
SSRP1-204ENST00000529002 ANAPC4Q9UJX5 808 aa22.3■■□□□ 1.16
SSRP1-204ENST00000529002 HTRA4P83105 476 aaPredicted RBP22.29■■□□□ 1.16
SSRP1-204ENST00000529002 PTK7Q13308 1070 aa22.29■■□□□ 1.16
SSRP1-204ENST00000529002 GPM6BQ13491 265 aa22.29■■□□□ 1.16
SSRP1-204ENST00000529002 SP7Q8TDD2 431 aaPredicted RBP22.29■■□□□ 1.16
SSRP1-204ENST00000529002 UBA5Q9GZZ9 404 aa22.29■■□□□ 1.16
SSRP1-204ENST00000529002 WDR19Q8NEZ3 1342 aa22.29■■□□□ 1.16
SSRP1-204ENST00000529002 HAS3O00219 553 aa22.28■■□□□ 1.16
SSRP1-204ENST00000529002 EFCAB14O75071 495 aa22.28■■□□□ 1.16
SSRP1-204ENST00000529002 FGRP09769 529 aa22.28■■□□□ 1.16
SSRP1-204ENST00000529002 DGKDQ16760 1214 aa22.28■■□□□ 1.16
SSRP1-204ENST00000529002 SYTL5Q8TDW5 730 aaPredicted RBP22.28■■□□□ 1.16
SSRP1-204ENST00000529002 DDX41Q9UJV9 622 aaKnown RBP22.28■■□□□ 1.16
SSRP1-204ENST00000529002 RALGAPA2Q2PPJ7 1873 aa22.28■■□□□ 1.16
SSRP1-204ENST00000529002 C19orf67A6NJJ6 358 aa22.27■■□□□ 1.16
SSRP1-204ENST00000529002 B4DLN1 442 aa22.27■■□□□ 1.16
SSRP1-204ENST00000529002 UPP2O95045 317 aa22.27■■□□□ 1.16
SSRP1-204ENST00000529002 AMHP03971 560 aa22.27■■□□□ 1.16
SSRP1-204ENST00000529002 IRS1P35568 1242 aa22.27■■□□□ 1.16
SSRP1-204ENST00000529002 MRPL12P52815 198 aaKnown RBP22.27■■□□□ 1.16
SSRP1-204ENST00000529002 CLUL1Q15846 466 aa22.27■■□□□ 1.16
SSRP1-204ENST00000529002 PTPROQ16827 1216 aa22.27■■□□□ 1.16
SSRP1-204ENST00000529002 PUS10Q3MIT2 529 aaKnown RBP22.27■■□□□ 1.16
SSRP1-204ENST00000529002 PABPC5Q96DU9 382 aaKnown RBP22.27■■□□□ 1.16
SSRP1-204ENST00000529002 SNX27Q96L92 541 aa22.27■■□□□ 1.16
SSRP1-204ENST00000529002 CLDND1Q9NY35 253 aa22.27■■□□□ 1.16
SSRP1-204ENST00000529002 H3BNC9 293 aa22.26■■□□□ 1.15
SSRP1-204ENST00000529002 LTBRP36941 435 aa22.26■■□□□ 1.15
SSRP1-204ENST00000529002 TIGD5Q53EQ6 642 aa22.26■■□□□ 1.15
SSRP1-204ENST00000529002 CHMP4BQ9H444 224 aaKnown RBP22.26■■□□□ 1.15
SSRP1-204ENST00000529002 DOCK5Q9H7D0 1870 aa22.26■■□□□ 1.15
SSRP1-204ENST00000529002 F2P00734 622 aa22.25■■□□□ 1.15
SSRP1-204ENST00000529002 SNHG28P0DPA3 235 aa22.25■■□□□ 1.15
SSRP1-204ENST00000529002 EIF2AK2P19525 551 aaKnown RBP22.25■■□□□ 1.15
SSRP1-204ENST00000529002 THPOP40225 353 aa22.25■■□□□ 1.15
SSRP1-204ENST00000529002 HAND2P61296 217 aa22.25■■□□□ 1.15
Retrieved 100 of 20,778 RNA–protein pairs in 26.2 ms