RNA–Protein interactions for RNA: ENST00000528563.5

HIF3A-211, Transcript of hypoxia inducible factor 3 subunit alpha, humanhuman

TSL 2

Gene HIF3A, Length 1,486 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HIF3A-211ENST00000528563 LY6KQ17RY6 165 aa19.36■□□□□ 0.69
HIF3A-211ENST00000528563 TEX2Q8IWB9 1127 aa19.36■□□□□ 0.69
HIF3A-211ENST00000528563 ZNF713Q8N859 430 aaPredicted RBP19.36■□□□□ 0.69
HIF3A-211ENST00000528563 STARD7Q9NQZ5 370 aa19.36■□□□□ 0.69
HIF3A-211ENST00000528563 DDX41Q9UJV9 622 aaKnown RBP19.36■□□□□ 0.69
HIF3A-211ENST00000528563 A6NJR5 290 aa19.35■□□□□ 0.69
HIF3A-211ENST00000528563 STXBP3O00186 592 aa19.35■□□□□ 0.69
HIF3A-211ENST00000528563 ZEB2O60315 1214 aa19.35■□□□□ 0.69
HIF3A-211ENST00000528563 CDK7P50613 346 aa19.35■□□□□ 0.69
HIF3A-211ENST00000528563 MRPS9P82933 396 aaKnown RBP19.35■□□□□ 0.69
HIF3A-211ENST00000528563 TLE2Q04725 743 aa19.35■□□□□ 0.69
HIF3A-211ENST00000528563 TRIM60Q495X7 471 aa19.35■□□□□ 0.69
HIF3A-211ENST00000528563 PPP1R18Q6NYC8 613 aa19.35■□□□□ 0.69
HIF3A-211ENST00000528563 CXCL17Q6UXB2 119 aa19.35■□□□□ 0.69
HIF3A-211ENST00000528563 RIC8AQ9NPQ8 531 aa19.35■□□□□ 0.69
HIF3A-211ENST00000528563 ZMYND8Q9ULU4 1186 aaPredicted RBP19.35■□□□□ 0.69
HIF3A-211ENST00000528563 ATP11BQ9Y2G3 1177 aa19.35■□□□□ 0.69
HIF3A-211ENST00000528563 KIAA1217Q5T5P2 1943 aa19.35■□□□□ 0.69
HIF3A-211ENST00000528563 CABYRO75952 493 aa19.35■□□□□ 0.69
HIF3A-211ENST00000528563 TGFB3P10600 412 aa19.35■□□□□ 0.69
HIF3A-211ENST00000528563 SCG2P13521 617 aa19.35■□□□□ 0.69
HIF3A-211ENST00000528563 NAPAP54920 295 aa19.35■□□□□ 0.69
HIF3A-211ENST00000528563 XRRA1Q6P2D8 792 aa19.35■□□□□ 0.69
HIF3A-211ENST00000528563 ANKRD33Q7Z3H0 272 aa19.35■□□□□ 0.69
HIF3A-211ENST00000528563 OR6J1Q8NGC5 347 aa19.35■□□□□ 0.69
HIF3A-211ENST00000528563 PHKBQ93100 1093 aa19.35■□□□□ 0.69
HIF3A-211ENST00000528563 ZFP91Q96JP5 570 aaPredicted RBP19.35■□□□□ 0.69
HIF3A-211ENST00000528563 RBM27Q9P2N5 1060 aaKnown RBP19.35■□□□□ 0.69
HIF3A-211ENST00000528563 SMCO2A6NFE2 343 aa19.34■□□□□ 0.69
HIF3A-211ENST00000528563 STAM2O75886 525 aa19.34■□□□□ 0.69
HIF3A-211ENST00000528563 SYN1P17600 705 aa19.34■□□□□ 0.69
HIF3A-211ENST00000528563 CPT1AP50416 773 aa19.34■□□□□ 0.69
HIF3A-211ENST00000528563 ARHGAP1Q07960 439 aa19.34■□□□□ 0.69
HIF3A-211ENST00000528563 UBE2SQ16763 222 aa19.34■□□□□ 0.69
HIF3A-211ENST00000528563 PCNX4Q63HM2 1172 aa19.34■□□□□ 0.69
HIF3A-211ENST00000528563 KCNV1Q6PIU1 500 aa19.34■□□□□ 0.69
HIF3A-211ENST00000528563 VTI1AQ96AJ9 217 aa19.34■□□□□ 0.69
HIF3A-211ENST00000528563 TOX2Q96NM4 488 aa19.34■□□□□ 0.69
HIF3A-211ENST00000528563 INPP4AQ96PE3 977 aaPredicted RBP19.34■□□□□ 0.69
HIF3A-211ENST00000528563 RNF26Q9BY78 433 aaPredicted RBP19.34■□□□□ 0.69
HIF3A-211ENST00000528563 MRVI1Q9Y6F6 885 aa19.34■□□□□ 0.69
HIF3A-211ENST00000528563 GH1P01241 217 aa19.33■□□□□ 0.68
HIF3A-211ENST00000528563 SLC43A3Q8NBI5 491 aa19.33■□□□□ 0.68
HIF3A-211ENST00000528563 EMID1Q96A84 441 aaPredicted RBP19.33■□□□□ 0.68
HIF3A-211ENST00000528563 PRO3102Q9H379 93 aa19.33■□□□□ 0.68
HIF3A-211ENST00000528563 POLR3EQ9NVU0 708 aa19.33■□□□□ 0.68
HIF3A-211ENST00000528563 TPCN1Q9ULQ1 816 aa19.33■□□□□ 0.68
HIF3A-211ENST00000528563 COLQQ9Y215 455 aaPredicted RBP19.33■□□□□ 0.68
HIF3A-211ENST00000528563 TRIOBPQ9H2D6 2365 aa19.32■□□□□ 0.68
HIF3A-211ENST00000528563 GRIN2DO15399 1336 aa19.32■□□□□ 0.68
HIF3A-211ENST00000528563 A0A0U1RQG5 324 aaPredicted RBP19.32■□□□□ 0.68
HIF3A-211ENST00000528563 ARVCFO00192 962 aa19.32■□□□□ 0.68
HIF3A-211ENST00000528563 PPFIA3O75145 1194 aa19.32■□□□□ 0.68
HIF3A-211ENST00000528563 ADCY7P51828 1080 aa19.32■□□□□ 0.68
HIF3A-211ENST00000528563 AK2P54819 239 aa19.32■□□□□ 0.68
HIF3A-211ENST00000528563 PURAQ00577 322 aaKnown RBP19.32■□□□□ 0.68
HIF3A-211ENST00000528563 SP2Q02086 613 aa19.32■□□□□ 0.68
HIF3A-211ENST00000528563 BRDTQ58F21 947 aaPredicted RBP19.32■□□□□ 0.68
HIF3A-211ENST00000528563 GLT8D2Q9H1C3 349 aa19.32■□□□□ 0.68
HIF3A-211ENST00000528563 RTEL1Q9NZ71 1219 aa19.32■□□□□ 0.68
HIF3A-211ENST00000528563 PCDHA6Q9UN73 950 aa19.32■□□□□ 0.68
HIF3A-211ENST00000528563 PCDHA8Q9Y5H6 950 aa19.32■□□□□ 0.68
HIF3A-211ENST00000528563 SPDYE3A6NKU9 549 aa19.31■□□□□ 0.68
HIF3A-211ENST00000528563 SPATA31C2B4DYI2 1134 aa19.31■□□□□ 0.68
HIF3A-211ENST00000528563 KPNA6O60684 536 aa19.31■□□□□ 0.68
HIF3A-211ENST00000528563 ICAM3P32942 547 aa19.31■□□□□ 0.68
HIF3A-211ENST00000528563 NEK4P51957 841 aa19.31■□□□□ 0.68
HIF3A-211ENST00000528563 AKAP17AQ02040 695 aaKnown RBP19.31■□□□□ 0.68
HIF3A-211ENST00000528563 STK3Q13188 491 aa19.31■□□□□ 0.68
HIF3A-211ENST00000528563 LAMC2Q13753 1193 aa19.31■□□□□ 0.68
HIF3A-211ENST00000528563 ANKRD1Q15327 319 aa19.31■□□□□ 0.68
HIF3A-211ENST00000528563 AFG1LQ8WV93 481 aa19.31■□□□□ 0.68
HIF3A-211ENST00000528563 GDF15Q99988 308 aa19.31■□□□□ 0.68
HIF3A-211ENST00000528563 SLC26A6Q9BXS9 759 aa19.31■□□□□ 0.68
HIF3A-211ENST00000528563 ZMYND12Q9H0C1 365 aa19.31■□□□□ 0.68
HIF3A-211ENST00000528563 ESYT2A0FGR8 921 aa19.3■□□□□ 0.68
HIF3A-211ENST00000528563 PFKFB2O60825 505 aa19.3■□□□□ 0.68
HIF3A-211ENST00000528563 PQBP1O60828 265 aaKnown RBP19.3■□□□□ 0.68
HIF3A-211ENST00000528563 FOSP01100 380 aaPredicted RBP19.3■□□□□ 0.68
HIF3A-211ENST00000528563 CLK2P49760 499 aaKnown RBP19.3■□□□□ 0.68
HIF3A-211ENST00000528563 ITGA7Q13683 1181 aa19.3■□□□□ 0.68
HIF3A-211ENST00000528563 MYSM1Q5VVJ2 828 aa19.3■□□□□ 0.68
HIF3A-211ENST00000528563 CHRDL2Q6WN34 429 aa19.3■□□□□ 0.68
HIF3A-211ENST00000528563 SH3RF1Q7Z6J0 888 aa19.3■□□□□ 0.68
HIF3A-211ENST00000528563 SEZ6LQ9BYH1 1024 aa19.3■□□□□ 0.68
HIF3A-211ENST00000528563 PDLIM7Q9NR12 457 aa19.3■□□□□ 0.68
HIF3A-211ENST00000528563 TRIM43BA6NCK2 446 aa19.29■□□□□ 0.68
HIF3A-211ENST00000528563 DCDC2CA8MYV0 355 aa19.29■□□□□ 0.68
HIF3A-211ENST00000528563 CPLX1O14810 134 aa19.29■□□□□ 0.68
HIF3A-211ENST00000528563 MYL3P08590 195 aa19.29■□□□□ 0.68
HIF3A-211ENST00000528563 PSMC6P62333 389 aa19.29■□□□□ 0.68
HIF3A-211ENST00000528563 SSRP1Q08945 709 aaKnown RBP19.29■□□□□ 0.68
HIF3A-211ENST00000528563 FAAP100Q0VG06 881 aa19.29■□□□□ 0.68
HIF3A-211ENST00000528563 SEMA3FQ13275 785 aa19.29■□□□□ 0.68
HIF3A-211ENST00000528563 GNPTABQ3T906 1256 aa19.29■□□□□ 0.68
HIF3A-211ENST00000528563 CELF3Q5SZQ8 465 aaKnown RBP19.29■□□□□ 0.68
HIF3A-211ENST00000528563 DHX37Q8IY37 1157 aaKnown RBP19.29■□□□□ 0.68
HIF3A-211ENST00000528563 TRIM43Q96BQ3 446 aaPredicted RBP19.29■□□□□ 0.68
HIF3A-211ENST00000528563 MTG1Q9BT17 334 aaPredicted RBP19.29■□□□□ 0.68
HIF3A-211ENST00000528563 SLKQ9H2G2 1235 aaPredicted RBP19.29■□□□□ 0.68
Retrieved 100 of 20,778 RNA–protein pairs in 18.3 ms