RNA–Protein interactions for RNA: ENST00000528516.5

LTBP3-210, Transcript of latent transforming growth factor beta binding protein 3, humanhuman

TSL 1 (best)

Gene LTBP3, Length 3,935 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LTBP3-210ENST00000528516 MOCS3O95396 460 aa19.66■□□□□ 0.74
LTBP3-210ENST00000528516 MECOMQ03112 1051 aa19.66■□□□□ 0.74
LTBP3-210ENST00000528516 ARFGAP2Q8N6H7 521 aa19.66■□□□□ 0.74
LTBP3-210ENST00000528516 ENAHQ8N8S7 591 aaPredicted RBP19.66■□□□□ 0.74
LTBP3-210ENST00000528516 AENQ8WTP8 325 aaKnown RBP19.66■□□□□ 0.74
LTBP3-210ENST00000528516 TUBGCP2Q9BSJ2 902 aa19.66■□□□□ 0.74
LTBP3-210ENST00000528516 ABCC6O95255 1503 aa19.65■□□□□ 0.74
LTBP3-210ENST00000528516 TOM1O60784 492 aa19.65■□□□□ 0.74
LTBP3-210ENST00000528516 CACNB3P54284 484 aa19.65■□□□□ 0.74
LTBP3-210ENST00000528516 CYB5D1Q6P9G0 228 aa19.65■□□□□ 0.74
LTBP3-210ENST00000528516 FOXP1Q9H334 677 aaPredicted RBP19.65■□□□□ 0.74
LTBP3-210ENST00000528516 GGA1Q9UJY5 639 aa19.65■□□□□ 0.74
LTBP3-210ENST00000528516 REXO2Q9Y3B8 237 aaKnown RBP19.65■□□□□ 0.74
LTBP3-210ENST00000528516 UTP18Q9Y5J1 556 aaKnown RBP eCLIP19.65■□□□□ 0.74
LTBP3-210ENST00000528516 MED1Q15648 1581 aaPredicted RBP19.65■□□□□ 0.74
LTBP3-210ENST00000528516 HERVK_113P62684 666 aa19.65■□□□□ 0.74
LTBP3-210ENST00000528516 DDR1Q08345 913 aa19.65■□□□□ 0.74
LTBP3-210ENST00000528516 ARHGAP44Q17R89 818 aa19.65■□□□□ 0.74
LTBP3-210ENST00000528516 RABL6Q3YEC7 729 aaPredicted RBP19.65■□□□□ 0.74
LTBP3-210ENST00000528516 PAPD7Q5XG87 772 aaKnown RBP19.65■□□□□ 0.74
LTBP3-210ENST00000528516 MYCBPAPQ8TBZ2 947 aa19.65■□□□□ 0.74
LTBP3-210ENST00000528516 UBLCP1Q8WVY7 318 aaPredicted RBP19.65■□□□□ 0.74
LTBP3-210ENST00000528516 FAM13AO94988 1023 aa19.65■□□□□ 0.74
LTBP3-210ENST00000528516 MRPL12P52815 198 aaKnown RBP19.65■□□□□ 0.74
LTBP3-210ENST00000528516 KRT26Q7Z3Y9 468 aa19.65■□□□□ 0.74
LTBP3-210ENST00000528516 NHEJ1Q9H9Q4 299 aaPredicted RBP19.65■□□□□ 0.74
LTBP3-210ENST00000528516 MLXIPQ9HAP2 919 aa19.65■□□□□ 0.74
LTBP3-210ENST00000528516 RGPD1P0DJD0 1748 aa19.65■□□□□ 0.74
LTBP3-210ENST00000528516 CLTAP09496 248 aa19.64■□□□□ 0.74
LTBP3-210ENST00000528516 HARSP12081 509 aaKnown RBP19.64■□□□□ 0.74
LTBP3-210ENST00000528516 SLC8A1P32418 973 aa19.64■□□□□ 0.74
LTBP3-210ENST00000528516 IL6STP40189 918 aaPredicted RBP19.64■□□□□ 0.74
LTBP3-210ENST00000528516 MAP2K1Q02750 393 aaPredicted RBP19.64■□□□□ 0.74
LTBP3-210ENST00000528516 PAK2Q13177 524 aa19.64■□□□□ 0.74
LTBP3-210ENST00000528516 PTGISQ16647 500 aa19.64■□□□□ 0.74
LTBP3-210ENST00000528516 CDKAL1Q5VV42 579 aa19.64■□□□□ 0.74
LTBP3-210ENST00000528516 HIBCHQ6NVY1 386 aaPredicted RBP19.64■□□□□ 0.74
LTBP3-210ENST00000528516 TCP11Q8WWU5 503 aa19.64■□□□□ 0.74
LTBP3-210ENST00000528516 THOC1Q96FV9 657 aaKnown RBP19.64■□□□□ 0.74
LTBP3-210ENST00000528516 FAM208AQ9UK61 1670 aaKnown RBP19.64■□□□□ 0.73
LTBP3-210ENST00000528516 BTDP43251 543 aa19.64■□□□□ 0.73
LTBP3-210ENST00000528516 KCTD1Q719H9 257 aa19.64■□□□□ 0.73
LTBP3-210ENST00000528516 CACNA2D3Q8IZS8 1091 aa19.64■□□□□ 0.73
LTBP3-210ENST00000528516 TRIM58Q8NG06 486 aa19.64■□□□□ 0.73
LTBP3-210ENST00000528516 SH3GL2Q99962 352 aa19.64■□□□□ 0.73
LTBP3-210ENST00000528516 HEXIM1O94992 359 aaKnown RBP19.64■□□□□ 0.73
LTBP3-210ENST00000528516 FNTAP49354 379 aa19.64■□□□□ 0.73
LTBP3-210ENST00000528516 TOB1P50616 345 aaPredicted RBP19.64■□□□□ 0.73
LTBP3-210ENST00000528516 SPDL1Q96EA4 605 aa19.64■□□□□ 0.73
LTBP3-210ENST00000528516 RNF26Q9BY78 433 aaPredicted RBP19.64■□□□□ 0.73
LTBP3-210ENST00000528516 ZNF804BA4D1E1 1349 aa19.64■□□□□ 0.73
LTBP3-210ENST00000528516 KDM6AO15550 1401 aaPredicted RBP19.64■□□□□ 0.73
LTBP3-210ENST00000528516 SMIM22K7EJ46 135 aa19.63■□□□□ 0.73
LTBP3-210ENST00000528516 MEIS1O00470 390 aa19.63■□□□□ 0.73
LTBP3-210ENST00000528516 NCK2O43639 380 aa19.63■□□□□ 0.73
LTBP3-210ENST00000528516 CNNM4Q6P4Q7 775 aa19.63■□□□□ 0.73
LTBP3-210ENST00000528516 WDR66Q8TBY9 1149 aa19.63■□□□□ 0.73
LTBP3-210ENST00000528516 BICD1Q96G01 975 aa19.63■□□□□ 0.73
LTBP3-210ENST00000528516 SELENOSQ9BQE4 189 aa19.63■□□□□ 0.73
LTBP3-210ENST00000528516 ITIH6Q6UXX5 1313 aa19.63■□□□□ 0.73
LTBP3-210ENST00000528516 FAM237AA0A1B0GTK4 181 aa19.63■□□□□ 0.73
LTBP3-210ENST00000528516 SEMA3EO15041 775 aa19.63■□□□□ 0.73
LTBP3-210ENST00000528516 KLHL30Q0D2K2 578 aa19.63■□□□□ 0.73
LTBP3-210ENST00000528516 MARCH10Q8NA82 808 aaPredicted RBP19.63■□□□□ 0.73
LTBP3-210ENST00000528516 PBX1P40424 430 aa19.63■□□□□ 0.73
LTBP3-210ENST00000528516 POLR2FP61218 127 aaKnown RBP19.63■□□□□ 0.73
LTBP3-210ENST00000528516 RASSF7Q02833 373 aa19.63■□□□□ 0.73
LTBP3-210ENST00000528516 MYO1EQ12965 1108 aa19.63■□□□□ 0.73
LTBP3-210ENST00000528516 AP1ARQ63HQ0 302 aa19.63■□□□□ 0.73
LTBP3-210ENST00000528516 ERMNQ8TAM6 284 aa19.63■□□□□ 0.73
LTBP3-210ENST00000528516 PIGSQ96S52 555 aa19.63■□□□□ 0.73
LTBP3-210ENST00000528516 DDX20Q9UHI6 824 aaKnown RBP19.63■□□□□ 0.73
LTBP3-210ENST00000528516 HYOU1Q9Y4L1 999 aa19.63■□□□□ 0.73
LTBP3-210ENST00000528516 WTIPA6NIX2 430 aaPredicted RBP19.62■□□□□ 0.73
LTBP3-210ENST00000528516 PPP1R3GB7ZBB8 358 aa19.62■□□□□ 0.73
LTBP3-210ENST00000528516 LIFRP42702 1097 aa19.62■□□□□ 0.73
LTBP3-210ENST00000528516 ADCY7P51828 1080 aa19.62■□□□□ 0.73
LTBP3-210ENST00000528516 CRYMQ14894 314 aa19.62■□□□□ 0.73
LTBP3-210ENST00000528516 PRR16Q569H4 304 aa19.62■□□□□ 0.73
LTBP3-210ENST00000528516 NT5DC1Q5TFE4 455 aa19.62■□□□□ 0.73
LTBP3-210ENST00000528516 DPH6Q7L8W6 267 aa19.62■□□□□ 0.73
LTBP3-210ENST00000528516 APTXQ7Z2E3 356 aaKnown RBP19.62■□□□□ 0.73
LTBP3-210ENST00000528516 ACTR5Q9H9F9 607 aaPredicted RBP19.62■□□□□ 0.73
LTBP3-210ENST00000528516 SPATS2LQ9NUQ6 558 aaKnown RBP19.62■□□□□ 0.73
LTBP3-210ENST00000528516 PALLDQ8WX93 1383 aa19.62■□□□□ 0.73
LTBP3-210ENST00000528516 ZC3H4Q9UPT8 1303 aaKnown RBP19.62■□□□□ 0.73
LTBP3-210ENST00000528516 MDH1P40925 334 aaKnown RBP19.62■□□□□ 0.73
LTBP3-210ENST00000528516 CLEC10AQ8IUN9 316 aa19.62■□□□□ 0.73
LTBP3-210ENST00000528516 ZNF526Q8TF50 670 aaPredicted RBP19.62■□□□□ 0.73
LTBP3-210ENST00000528516 GJA10Q969M2 543 aa19.62■□□□□ 0.73
LTBP3-210ENST00000528516 A1CFQ9NQ94 594 aaKnown RBP19.62■□□□□ 0.73
LTBP3-210ENST00000528516 GCOM1H8Y6P7 765 aaPredicted RBP19.62■□□□□ 0.73
LTBP3-210ENST00000528516 MYZAPP0CAP1 466 aa19.62■□□□□ 0.73
LTBP3-210ENST00000528516 UBE2SQ16763 222 aa19.62■□□□□ 0.73
LTBP3-210ENST00000528516 CNOT6LQ96LI5 555 aaKnown RBP19.62■□□□□ 0.73
LTBP3-210ENST00000528516 USP40Q9NVE5 1235 aa19.62■□□□□ 0.73
LTBP3-210ENST00000528516 GTPBP6O43824 516 aaPredicted RBP19.61■□□□□ 0.73
LTBP3-210ENST00000528516 MB21D1Q8N884 522 aa19.61■□□□□ 0.73
LTBP3-210ENST00000528516 TBCKQ8TEA7 893 aa19.61■□□□□ 0.73
LTBP3-210ENST00000528516 ISCA1Q9BUE6 129 aa19.61■□□□□ 0.73
Retrieved 100 of 20,778 RNA–protein pairs in 33.6 ms