RNA–Protein interactions for RNA: ENST00000528230.5

TRAPPC4-209, Transcript of trafficking protein particle complex 4, humanhuman

TSL 3 BASIC

Gene TRAPPC4, Length 583 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAPPC4-209ENST00000528230 TEX2Q8IWB9 1127 aa13.97□□□□□ -0.17
TRAPPC4-209ENST00000528230 CMTR1Q8N1G2 835 aaKnown RBP13.97□□□□□ -0.17
TRAPPC4-209ENST00000528230 CUL5Q93034 780 aa13.97□□□□□ -0.17
TRAPPC4-209ENST00000528230 TRIM43Q96BQ3 446 aaPredicted RBP13.97□□□□□ -0.17
TRAPPC4-209ENST00000528230 AGXT2Q9BYV1 514 aa13.97□□□□□ -0.17
TRAPPC4-209ENST00000528230 PRDM5Q9NQX1 630 aaPredicted RBP13.97□□□□□ -0.17
TRAPPC4-209ENST00000528230 TMEM39AQ9NV64 488 aa13.97□□□□□ -0.17
TRAPPC4-209ENST00000528230 DDX41Q9UJV9 622 aaKnown RBP13.97□□□□□ -0.17
TRAPPC4-209ENST00000528230 TRIOBPQ9H2D6 2365 aa13.96□□□□□ -0.17
TRAPPC4-209ENST00000528230 FRMPD4Q14CM0 1322 aa13.96□□□□□ -0.17
TRAPPC4-209ENST00000528230 CCDC196A0A1B0GTZ2 297 aa13.96□□□□□ -0.17
TRAPPC4-209ENST00000528230 TLR3O15455 904 aaKnown RBP13.96□□□□□ -0.17
TRAPPC4-209ENST00000528230 STAM2O75886 525 aa13.96□□□□□ -0.17
TRAPPC4-209ENST00000528230 GH1P01241 217 aa13.96□□□□□ -0.17
TRAPPC4-209ENST00000528230 TGFB3P10600 412 aa13.96□□□□□ -0.17
TRAPPC4-209ENST00000528230 MYCLP12524 364 aaPredicted RBP13.96□□□□□ -0.17
TRAPPC4-209ENST00000528230 CCND2P30279 289 aa13.96□□□□□ -0.17
TRAPPC4-209ENST00000528230 PURAQ00577 322 aaKnown RBP13.96□□□□□ -0.17
TRAPPC4-209ENST00000528230 FAM126BQ8IXS8 530 aa13.96□□□□□ -0.17
TRAPPC4-209ENST00000528230 TDHQ8IZJ6 230 aa13.96□□□□□ -0.17
TRAPPC4-209ENST00000528230 CCDC82Q8N4S0 544 aa13.96□□□□□ -0.17
TRAPPC4-209ENST00000528230 SMARCC2Q8TAQ2 1214 aa13.96□□□□□ -0.17
TRAPPC4-209ENST00000528230 COPS5Q92905 334 aa13.96□□□□□ -0.17
TRAPPC4-209ENST00000528230 EMID1Q96A84 441 aaPredicted RBP13.96□□□□□ -0.17
TRAPPC4-209ENST00000528230 PSTPIP2Q9H939 334 aa13.96□□□□□ -0.17
TRAPPC4-209ENST00000528230 SCN10AQ9Y5Y9 1956 aa13.96□□□□□ -0.18
TRAPPC4-209ENST00000528230 GRIN2DO15399 1336 aa13.95□□□□□ -0.18
TRAPPC4-209ENST00000528230 CNTNAP5Q8WYK1 1306 aa13.95□□□□□ -0.18
TRAPPC4-209ENST00000528230 DNAH12Q6ZR08 3092 aa13.95□□□□□ -0.18
TRAPPC4-209ENST00000528230 GOLGA8AA7E2F4 631 aa13.95□□□□□ -0.18
TRAPPC4-209ENST00000528230 GOLGA8BA8MQT2 603 aa13.95□□□□□ -0.18
TRAPPC4-209ENST00000528230 MEIS2O14770 477 aa13.95□□□□□ -0.18
TRAPPC4-209ENST00000528230 EIF5BO60841 1220 aaKnown RBP13.95□□□□□ -0.18
TRAPPC4-209ENST00000528230 RGS20O76081 388 aa13.95□□□□□ -0.18
TRAPPC4-209ENST00000528230 CD4P01730 458 aa13.95□□□□□ -0.18
TRAPPC4-209ENST00000528230 CPA1P15085 419 aa13.95□□□□□ -0.18
TRAPPC4-209ENST00000528230 RAG1P15918 1043 aa13.95□□□□□ -0.18
TRAPPC4-209ENST00000528230 EVCP57679 992 aa13.95□□□□□ -0.18
TRAPPC4-209ENST00000528230 FUT2Q10981 343 aa13.95□□□□□ -0.18
TRAPPC4-209ENST00000528230 LAMC2Q13753 1193 aa13.95□□□□□ -0.18
TRAPPC4-209ENST00000528230 LY6KQ17RY6 165 aa13.95□□□□□ -0.18
TRAPPC4-209ENST00000528230 XRRA1Q6P2D8 792 aa13.95□□□□□ -0.18
TRAPPC4-209ENST00000528230 BADQ92934 168 aa13.95□□□□□ -0.18
TRAPPC4-209ENST00000528230 BRF1Q92994 677 aa13.95□□□□□ -0.18
TRAPPC4-209ENST00000528230 MTG1Q9BT17 334 aaPredicted RBP13.95□□□□□ -0.18
TRAPPC4-209ENST00000528230 TM6SF1Q9BZW5 370 aa13.95□□□□□ -0.18
TRAPPC4-209ENST00000528230 ZSWIM6Q9HCJ5 1215 aa13.95□□□□□ -0.18
TRAPPC4-209ENST00000528230 FAM217BQ9NTX9 383 aaPredicted RBP13.95□□□□□ -0.18
TRAPPC4-209ENST00000528230 TBX21Q9UL17 535 aa13.95□□□□□ -0.18
TRAPPC4-209ENST00000528230 MRVI1Q9Y6F6 885 aa13.95□□□□□ -0.18
TRAPPC4-209ENST00000528230 hCG_1984214I3L0E3 225 aa13.94□□□□□ -0.18
TRAPPC4-209ENST00000528230 TIMP1P01033 207 aa13.94□□□□□ -0.18
TRAPPC4-209ENST00000528230 MYL3P08590 195 aa13.94□□□□□ -0.18
TRAPPC4-209ENST00000528230 CASTP20810 708 aaKnown RBP13.94□□□□□ -0.18
TRAPPC4-209ENST00000528230 CDC27P30260 824 aa13.94□□□□□ -0.18
TRAPPC4-209ENST00000528230 METAP2P50579 478 aaKnown RBP eCLIP13.94□□□□□ -0.18
TRAPPC4-209ENST00000528230 ARHGAP1Q07960 439 aa13.94□□□□□ -0.18
TRAPPC4-209ENST00000528230 APOBRQ0VD83 1088 aa13.94□□□□□ -0.18
TRAPPC4-209ENST00000528230 LRIT3Q3SXY7 679 aa13.94□□□□□ -0.18
TRAPPC4-209ENST00000528230 USP17L6PQ6QN14 398 aa13.94□□□□□ -0.18
TRAPPC4-209ENST00000528230 RUFY3Q7L099 469 aa13.94□□□□□ -0.18
TRAPPC4-209ENST00000528230 ZNF713Q8N859 430 aaPredicted RBP13.94□□□□□ -0.18
TRAPPC4-209ENST00000528230 IL31RAQ8NI17 732 aa13.94□□□□□ -0.18
TRAPPC4-209ENST00000528230 V9GY48 417 aaPredicted RBP13.94□□□□□ -0.18
TRAPPC4-209ENST00000528230 NID2Q14112 1375 aa13.94□□□□□ -0.18
TRAPPC4-209ENST00000528230 hCG_1642624A0A1W2PR95 340 aa13.93□□□□□ -0.18
TRAPPC4-209ENST00000528230 ITGB8P26012 769 aa13.93□□□□□ -0.18
TRAPPC4-209ENST00000528230 ICAM3P32942 547 aa13.93□□□□□ -0.18
TRAPPC4-209ENST00000528230 PSMC6P62333 389 aa13.93□□□□□ -0.18
TRAPPC4-209ENST00000528230 MRPS9P82933 396 aaKnown RBP13.93□□□□□ -0.18
TRAPPC4-209ENST00000528230 PTPN11Q06124 597 aaPredicted RBP13.93□□□□□ -0.18
TRAPPC4-209ENST00000528230 GNPTABQ3T906 1256 aa13.93□□□□□ -0.18
TRAPPC4-209ENST00000528230 PCNX4Q63HM2 1172 aa13.93□□□□□ -0.18
TRAPPC4-209ENST00000528230 PPP1R18Q6NYC8 613 aa13.93□□□□□ -0.18
TRAPPC4-209ENST00000528230 HEATR3Q7Z4Q2 680 aa13.93□□□□□ -0.18
TRAPPC4-209ENST00000528230 DHX37Q8IY37 1157 aaKnown RBP13.93□□□□□ -0.18
TRAPPC4-209ENST00000528230 AFG1LQ8WV93 481 aa13.93□□□□□ -0.18
TRAPPC4-209ENST00000528230 CYP46A1Q9Y6A2 500 aa13.93□□□□□ -0.18
TRAPPC4-209ENST00000528230 MMP3P08254 477 aa13.92□□□□□ -0.18
TRAPPC4-209ENST00000528230 SUPT20HL2P0C7V6 817 aa13.92□□□□□ -0.18
TRAPPC4-209ENST00000528230 ADD1P35611 737 aaKnown RBP13.92□□□□□ -0.18
TRAPPC4-209ENST00000528230 DGKDQ16760 1214 aa13.92□□□□□ -0.18
TRAPPC4-209ENST00000528230 CELF3Q5SZQ8 465 aaKnown RBP13.92□□□□□ -0.18
TRAPPC4-209ENST00000528230 MYSM1Q5VVJ2 828 aa13.92□□□□□ -0.18
TRAPPC4-209ENST00000528230 MFSD5Q6N075 450 aa13.92□□□□□ -0.18
TRAPPC4-209ENST00000528230 NFRKBQ6P4R8 1299 aa13.92□□□□□ -0.18
TRAPPC4-209ENST00000528230 PPTC7Q8NI37 304 aa13.92□□□□□ -0.18
TRAPPC4-209ENST00000528230 INPP4AQ96PE3 977 aaPredicted RBP13.92□□□□□ -0.18
TRAPPC4-209ENST00000528230 GLT8D2Q9H1C3 349 aa13.92□□□□□ -0.18
TRAPPC4-209ENST00000528230 NAP1L2Q9ULW6 460 aaPredicted RBP13.92□□□□□ -0.18
TRAPPC4-209ENST00000528230 SPDYE3A6NKU9 549 aa13.91□□□□□ -0.18
TRAPPC4-209ENST00000528230 SPATA31C2B4DYI2 1134 aa13.91□□□□□ -0.18
TRAPPC4-209ENST00000528230 PPFIA4O75335 1185 aa13.91□□□□□ -0.18
TRAPPC4-209ENST00000528230 HOXD8P13378 290 aaPredicted RBP13.91□□□□□ -0.18
TRAPPC4-209ENST00000528230 SP2Q02086 613 aa13.91□□□□□ -0.18
TRAPPC4-209ENST00000528230 FPGSQ05932 587 aa13.91□□□□□ -0.18
TRAPPC4-209ENST00000528230 NBPF20Q3BBV1 942 aa13.91□□□□□ -0.18
TRAPPC4-209ENST00000528230 WWC2Q6AWC2 1192 aa13.91□□□□□ -0.18
TRAPPC4-209ENST00000528230 GPR153Q6NV75 609 aa13.91□□□□□ -0.18
TRAPPC4-209ENST00000528230 GPKOWQ92917 476 aaPredicted RBP eCLIP13.91□□□□□ -0.18
Retrieved 100 of 20,778 RNA–protein pairs in 59.2 ms