RNA–Protein interactions for RNA: ENST00000527881.1

TSKU-203, Transcript of tsukushi, small leucine rich proteoglycan, humanhuman

APPRIS P1 TSL 2 BASIC

Gene TSKU, Length 3,554 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TSKU-203ENST00000527881 KCNJ2P63252 427 aa13.72□□□□□ -0.21
TSKU-203ENST00000527881 CDCA2Q69YH5 1023 aaPredicted RBP13.72□□□□□ -0.21
TSKU-203ENST00000527881 LPIN2Q92539 896 aa13.72□□□□□ -0.21
TSKU-203ENST00000527881 PLEKHG1Q9ULL1 1385 aa13.72□□□□□ -0.21
TSKU-203ENST00000527881 SMNDC1O75940 238 aaKnown RBP eCLIP13.72□□□□□ -0.21
TSKU-203ENST00000527881 CTCFP49711 727 aaPredicted RBP13.72□□□□□ -0.21
TSKU-203ENST00000527881 ERVK-9P63128 1117 aa13.72□□□□□ -0.21
TSKU-203ENST00000527881 PDE4DQ08499 809 aa13.72□□□□□ -0.21
TSKU-203ENST00000527881 MAP3K12Q12852 859 aa13.72□□□□□ -0.21
TSKU-203ENST00000527881 BYSLQ13895 437 aaKnown RBP13.72□□□□□ -0.21
TSKU-203ENST00000527881 EMC10Q5UCC4 262 aa13.72□□□□□ -0.21
TSKU-203ENST00000527881 CRELD2Q6UXH1 353 aaPredicted RBP13.72□□□□□ -0.21
TSKU-203ENST00000527881 SPICE1Q8N0Z3 855 aa13.72□□□□□ -0.21
TSKU-203ENST00000527881 ARMT1Q9H993 441 aa13.72□□□□□ -0.21
TSKU-203ENST00000527881 ATP8A1Q9Y2Q0 1164 aa13.72□□□□□ -0.21
TSKU-203ENST00000527881 LUC7L3O95232 432 aaKnown RBP13.72□□□□□ -0.21
TSKU-203ENST00000527881 ASIC1P78348 528 aa13.72□□□□□ -0.21
TSKU-203ENST00000527881 ATP11AP98196 1134 aa13.72□□□□□ -0.21
TSKU-203ENST00000527881 MTMR3Q13615 1198 aa13.72□□□□□ -0.21
TSKU-203ENST00000527881 BICDL2A1A5D9 508 aa13.71□□□□□ -0.21
TSKU-203ENST00000527881 PDHA1P08559 390 aa13.71□□□□□ -0.21
TSKU-203ENST00000527881 TRPM8Q7Z2W7 1104 aa13.71□□□□□ -0.21
TSKU-203ENST00000527881 PLBD2Q8NHP8 589 aa13.71□□□□□ -0.21
TSKU-203ENST00000527881 PLAGL2Q9UPG8 496 aa13.71□□□□□ -0.21
TSKU-203ENST00000527881 CFAP73A6NFT4 308 aa13.71□□□□□ -0.21
TSKU-203ENST00000527881 PP2D1A8MPX8 630 aa13.71□□□□□ -0.21
TSKU-203ENST00000527881 GNAT1P11488 350 aa13.71□□□□□ -0.21
TSKU-203ENST00000527881 MCAMP43121 646 aa13.71□□□□□ -0.21
TSKU-203ENST00000527881 RPS6KA3P51812 740 aa13.71□□□□□ -0.21
TSKU-203ENST00000527881 GIGYF2Q6Y7W6 1299 aaKnown RBP13.71□□□□□ -0.21
TSKU-203ENST00000527881 ANKLE2Q86XL3 938 aa13.71□□□□□ -0.21
TSKU-203ENST00000527881 IFNL3Q8IZI9 196 aa13.71□□□□□ -0.21
TSKU-203ENST00000527881 NLRP3Q96P20 1036 aa13.71□□□□□ -0.21
TSKU-203ENST00000527881 TTYH3Q9C0H2 523 aa13.71□□□□□ -0.21
TSKU-203ENST00000527881 DDX47Q9H0S4 455 aaKnown RBP13.71□□□□□ -0.21
TSKU-203ENST00000527881 IGF2BP3O00425 579 aaKnown RBP eCLIP13.71□□□□□ -0.22
TSKU-203ENST00000527881 DAPK3O43293 454 aa13.71□□□□□ -0.22
TSKU-203ENST00000527881 CHN1P15882 459 aa13.71□□□□□ -0.22
TSKU-203ENST00000527881 PDE6AP16499 860 aa13.71□□□□□ -0.22
TSKU-203ENST00000527881 ERICH1Q86X53 443 aa13.71□□□□□ -0.22
TSKU-203ENST00000527881 RPUSD2Q8IZ73 545 aaKnown RBP13.71□□□□□ -0.22
TSKU-203ENST00000527881 UHMK1Q8TAS1 419 aaKnown RBP13.71□□□□□ -0.22
TSKU-203ENST00000527881 P2RX5Q93086 422 aa13.71□□□□□ -0.22
TSKU-203ENST00000527881 NSRP1Q9H0G5 558 aaKnown RBP13.71□□□□□ -0.22
TSKU-203ENST00000527881 PAPOLBQ9NRJ5 636 aaKnown RBP13.71□□□□□ -0.22
TSKU-203ENST00000527881 CORO1CQ9ULV4 474 aaPredicted RBP13.71□□□□□ -0.22
TSKU-203ENST00000527881 MYH13Q9UKX3 1938 aa13.7□□□□□ -0.22
TSKU-203ENST00000527881 LRRD1A4D1F6 860 aa13.7□□□□□ -0.22
TSKU-203ENST00000527881 RASSF10A6NK89 507 aa13.7□□□□□ -0.22
TSKU-203ENST00000527881 EPHB6O15197 1021 aa13.7□□□□□ -0.22
TSKU-203ENST00000527881 ALDH5A1P51649 535 aaPredicted RBP13.7□□□□□ -0.22
TSKU-203ENST00000527881 ATP2C1P98194 919 aaPredicted RBP13.7□□□□□ -0.22
TSKU-203ENST00000527881 RPS6KA1Q15418 735 aa13.7□□□□□ -0.22
TSKU-203ENST00000527881 KIAA0753Q2KHM9 967 aa13.7□□□□□ -0.22
TSKU-203ENST00000527881 ANKRD40Q6AI12 368 aa13.7□□□□□ -0.22
TSKU-203ENST00000527881 RAPGEF4Q8WZA2 1011 aa13.7□□□□□ -0.22
TSKU-203ENST00000527881 NACAP1Q9BZK3 213 aa13.7□□□□□ -0.22
TSKU-203ENST00000527881 ISCUQ9H1K1 167 aa13.7□□□□□ -0.22
TSKU-203ENST00000527881 ECT2Q9H8V3 914 aa13.7□□□□□ -0.22
TSKU-203ENST00000527881 PIH1D3Q9NQM4 214 aaKnown RBP13.7□□□□□ -0.22
TSKU-203ENST00000527881 INTS9Q9NV88 658 aaKnown RBP13.7□□□□□ -0.22
TSKU-203ENST00000527881 F8W031 263 aaPredicted RBP13.7□□□□□ -0.22
TSKU-203ENST00000527881 ATP2A2P16615 1042 aaKnown RBP13.7□□□□□ -0.22
TSKU-203ENST00000527881 PAPOLAP51003 745 aaKnown RBP13.7□□□□□ -0.22
TSKU-203ENST00000527881 UAP1Q16222 522 aaPredicted RBP13.7□□□□□ -0.22
TSKU-203ENST00000527881 TTI2Q6NXR4 508 aa13.7□□□□□ -0.22
TSKU-203ENST00000527881 TOM1L2Q6ZVM7 507 aa13.7□□□□□ -0.22
TSKU-203ENST00000527881 LRRC34Q8IZ02 419 aa13.7□□□□□ -0.22
TSKU-203ENST00000527881 PPIL4Q8WUA2 492 aaKnown RBP eCLIP13.7□□□□□ -0.22
TSKU-203ENST00000527881 ACSBG1Q96GR2 724 aa13.7□□□□□ -0.22
TSKU-203ENST00000527881 CNOT10Q9H9A5 744 aaKnown RBP13.7□□□□□ -0.22
TSKU-203ENST00000527881 CNNM1Q9NRU3 951 aa13.7□□□□□ -0.22
TSKU-203ENST00000527881 ABCF3Q9NUQ8 709 aa13.7□□□□□ -0.22
TSKU-203ENST00000527881 ZFATQ9P243 1243 aa13.7□□□□□ -0.22
TSKU-203ENST00000527881 NWD1Q149M9 1564 aa13.7□□□□□ -0.22
TSKU-203ENST00000527881 A8MUI8 341 aa13.7□□□□□ -0.22
TSKU-203ENST00000527881 UBOX5O94941 541 aa13.7□□□□□ -0.22
TSKU-203ENST00000527881 NQO1P15559 274 aaKnown RBP13.7□□□□□ -0.22
TSKU-203ENST00000527881 ZC3H6P61129 1189 aaKnown RBP13.7□□□□□ -0.22
TSKU-203ENST00000527881 CUL1Q13616 776 aa13.7□□□□□ -0.22
TSKU-203ENST00000527881 TMTC2Q8N394 836 aa13.7□□□□□ -0.22
TSKU-203ENST00000527881 MGARPQ8TDB4 240 aa13.7□□□□□ -0.22
TSKU-203ENST00000527881 GOLPH3Q9H4A6 298 aa13.7□□□□□ -0.22
TSKU-203ENST00000527881 TECPR2O15040 1411 aa13.69□□□□□ -0.22
TSKU-203ENST00000527881 C5orf60A6NFR6 353 aa13.69□□□□□ -0.22
TSKU-203ENST00000527881 ANKRD20A2Q5SQ80 823 aa13.69□□□□□ -0.22
TSKU-203ENST00000527881 ANKRD20A1Q5TYW2 823 aa13.69□□□□□ -0.22
TSKU-203ENST00000527881 AGBL2Q5U5Z8 902 aa13.69□□□□□ -0.22
TSKU-203ENST00000527881 ANKRD20A3Q5VUR7 823 aa13.69□□□□□ -0.22
TSKU-203ENST00000527881 MAGEB6Q8N7X4 407 aa13.69□□□□□ -0.22
TSKU-203ENST00000527881 RNF26Q9BY78 433 aaPredicted RBP13.69□□□□□ -0.22
TSKU-203ENST00000527881 G3BP2Q9UN86 482 aaKnown RBP13.69□□□□□ -0.22
TSKU-203ENST00000527881 NALCNQ8IZF0 1738 aa13.69□□□□□ -0.22
TSKU-203ENST00000527881 H7C1W4 665 aa13.69□□□□□ -0.22
TSKU-203ENST00000527881 PRKAB2O43741 272 aa13.69□□□□□ -0.22
TSKU-203ENST00000527881 CCND1P24385 295 aa13.69□□□□□ -0.22
TSKU-203ENST00000527881 FLT3P36888 993 aa13.69□□□□□ -0.22
TSKU-203ENST00000527881 RBM5P52756 815 aaKnown RBP eCLIP13.69□□□□□ -0.22
TSKU-203ENST00000527881 C1orf131Q8NDD1 294 aaKnown RBP13.69□□□□□ -0.22
TSKU-203ENST00000527881 ZCWPW1Q9H0M4 648 aa13.69□□□□□ -0.22
Retrieved 100 of 20,778 RNA–protein pairs in 29 ms