RNA–Protein interactions for RNA: ENST00000527680.1

TRAPPC4-208, Transcript of trafficking protein particle complex 4, humanhuman

TSL 2

Gene TRAPPC4, Length 569 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAPPC4-208ENST00000527680 DDX41Q9UJV9 622 aaKnown RBP26.01■■□□□ 1.75
TRAPPC4-208ENST00000527680 PRUNE2Q8WUY3 3088 aa26.01■■□□□ 1.75
TRAPPC4-208ENST00000527680 PALM3A6NDB9 673 aaPredicted RBP26■■□□□ 1.75
TRAPPC4-208ENST00000527680 PITPNM1O00562 1244 aa26■■□□□ 1.75
TRAPPC4-208ENST00000527680 MYOGP15173 224 aa26■■□□□ 1.75
TRAPPC4-208ENST00000527680 CHMLP26374 656 aa26■■□□□ 1.75
TRAPPC4-208ENST00000527680 RFC2P35250 354 aa26■■□□□ 1.75
TRAPPC4-208ENST00000527680 IRX6P78412 446 aaPredicted RBP26■■□□□ 1.75
TRAPPC4-208ENST00000527680 PTH1RQ03431 593 aa26■■□□□ 1.75
TRAPPC4-208ENST00000527680 CCDC85BQ15834 202 aaPredicted RBP26■■□□□ 1.75
TRAPPC4-208ENST00000527680 PPP2R2DQ66LE6 453 aa26■■□□□ 1.75
TRAPPC4-208ENST00000527680 DHX37Q8IY37 1157 aaKnown RBP26■■□□□ 1.75
TRAPPC4-208ENST00000527680 SYMPKQ92797 1274 aaKnown RBP26■■□□□ 1.75
TRAPPC4-208ENST00000527680 VWCEQ96DN2 955 aa26■■□□□ 1.75
TRAPPC4-208ENST00000527680 PCDHA11Q9Y5I1 949 aa26■■□□□ 1.75
TRAPPC4-208ENST00000527680 SCN5AQ14524 2016 aa26■■□□□ 1.75
TRAPPC4-208ENST00000527680 KIAA1217Q5T5P2 1943 aa26■■□□□ 1.75
TRAPPC4-208ENST00000527680 GBF1Q92538 1859 aa26■■□□□ 1.75
TRAPPC4-208ENST00000527680 CYP21A2P08686 494 aa25.99■■□□□ 1.75
TRAPPC4-208ENST00000527680 HSD17B4P51659 736 aa25.99■■□□□ 1.75
TRAPPC4-208ENST00000527680 TRAF1Q13077 416 aa25.99■■□□□ 1.75
TRAPPC4-208ENST00000527680 SART3Q15020 963 aaKnown RBP25.99■■□□□ 1.75
TRAPPC4-208ENST00000527680 CCDC155Q8N6L0 562 aa25.99■■□□□ 1.75
TRAPPC4-208ENST00000527680 MAP3K20Q9NYL2 800 aaKnown RBP25.99■■□□□ 1.75
TRAPPC4-208ENST00000527680 TRIP12Q14669 1992 aaPredicted RBP25.98■■□□□ 1.75
TRAPPC4-208ENST00000527680 HOXA13P31271 388 aaPredicted RBP25.98■■□□□ 1.75
TRAPPC4-208ENST00000527680 LAMC2Q13753 1193 aa25.98■■□□□ 1.75
TRAPPC4-208ENST00000527680 WTAPQ15007 396 aa25.98■■□□□ 1.75
TRAPPC4-208ENST00000527680 TMEM67Q5HYA8 995 aa25.98■■□□□ 1.75
TRAPPC4-208ENST00000527680 C7orf31Q8N865 590 aa25.98■■□□□ 1.75
TRAPPC4-208ENST00000527680 NCOA7Q8NI08 942 aa25.98■■□□□ 1.75
TRAPPC4-208ENST00000527680 ALG1Q9BT22 464 aa25.98■■□□□ 1.75
TRAPPC4-208ENST00000527680 MYH7BA7E2Y1 1941 aa25.98■■□□□ 1.75
TRAPPC4-208ENST00000527680 PPP1R11O60927 126 aaPredicted RBP25.97■■□□□ 1.75
TRAPPC4-208ENST00000527680 GDF6Q6KF10 455 aaPredicted RBP25.97■■□□□ 1.75
TRAPPC4-208ENST00000527680 MTMR8Q96EF0 704 aa25.97■■□□□ 1.75
TRAPPC4-208ENST00000527680 PIGSQ96S52 555 aa25.97■■□□□ 1.75
TRAPPC4-208ENST00000527680 BAZ2BQ9UIF8 2168 aaKnown RBP25.97■■□□□ 1.75
TRAPPC4-208ENST00000527680 GCOM1H8Y6P7 765 aaPredicted RBP25.96■■□□□ 1.75
TRAPPC4-208ENST00000527680 OPLAHO14841 1288 aa25.96■■□□□ 1.75
TRAPPC4-208ENST00000527680 POLR2MP0CAP2 368 aa25.96■■□□□ 1.75
TRAPPC4-208ENST00000527680 ADGRE1Q14246 886 aa25.96■■□□□ 1.75
TRAPPC4-208ENST00000527680 GRM4Q14833 912 aa25.96■■□□□ 1.75
TRAPPC4-208ENST00000527680 FCHSD1Q86WN1 690 aa25.96■■□□□ 1.75
TRAPPC4-208ENST00000527680 SAMD3Q8N6K7 520 aa25.96■■□□□ 1.75
TRAPPC4-208ENST00000527680 KAT2BQ92831 832 aa25.96■■□□□ 1.75
TRAPPC4-208ENST00000527680 PDCD2LQ9BRP1 358 aa25.96■■□□□ 1.75
TRAPPC4-208ENST00000527680 PRDM6Q9NQX0 595 aa25.96■■□□□ 1.75
TRAPPC4-208ENST00000527680 E7EWF7 191 aa25.95■■□□□ 1.74
TRAPPC4-208ENST00000527680 SORBS3O60504 671 aa25.95■■□□□ 1.74
TRAPPC4-208ENST00000527680 PSEN2P49810 448 aa25.95■■□□□ 1.74
TRAPPC4-208ENST00000527680 KCNV1Q6PIU1 500 aa25.95■■□□□ 1.74
TRAPPC4-208ENST00000527680 STOX1Q6ZVD7 989 aa25.95■■□□□ 1.74
TRAPPC4-208ENST00000527680 CATIPQ7Z7H3 387 aa25.95■■□□□ 1.74
TRAPPC4-208ENST00000527680 CAGE1Q8TC20 777 aa25.95■■□□□ 1.74
TRAPPC4-208ENST00000527680 KATNAL1Q9BW62 490 aa25.95■■□□□ 1.74
TRAPPC4-208ENST00000527680 RIOX1Q9H6W3 641 aa25.95■■□□□ 1.74
TRAPPC4-208ENST00000527680 SENP2Q9HC62 589 aa25.95■■□□□ 1.74
TRAPPC4-208ENST00000527680 HDAC6Q9UBN7 1215 aa25.95■■□□□ 1.74
TRAPPC4-208ENST00000527680 KIF28PB7ZC32 967 aa25.94■■□□□ 1.74
TRAPPC4-208ENST00000527680 TJAP1Q5JTD0 557 aa25.94■■□□□ 1.74
TRAPPC4-208ENST00000527680 SESTD1Q86VW0 696 aa25.94■■□□□ 1.74
TRAPPC4-208ENST00000527680 PPTC7Q8NI37 304 aa25.94■■□□□ 1.74
TRAPPC4-208ENST00000527680 AFAP1L1Q8TED9 768 aa25.94■■□□□ 1.74
TRAPPC4-208ENST00000527680 PIBF1Q8WXW3 757 aa25.94■■□□□ 1.74
TRAPPC4-208ENST00000527680 EMID1Q96A84 441 aaPredicted RBP25.94■■□□□ 1.74
TRAPPC4-208ENST00000527680 ZFP91Q96JP5 570 aaPredicted RBP25.94■■□□□ 1.74
TRAPPC4-208ENST00000527680 SLC9A7Q96T83 725 aa25.94■■□□□ 1.74
TRAPPC4-208ENST00000527680 PNMA6FA0A0J9YX94 578 aa25.93■■□□□ 1.74
TRAPPC4-208ENST00000527680 CCND2P30279 289 aa25.93■■□□□ 1.74
TRAPPC4-208ENST00000527680 MFSD10Q14728 455 aa25.93■■□□□ 1.74
TRAPPC4-208ENST00000527680 PGM5Q15124 567 aa25.93■■□□□ 1.74
TRAPPC4-208ENST00000527680 KIAA0753Q2KHM9 967 aa25.93■■□□□ 1.74
TRAPPC4-208ENST00000527680 VSIG10LQ86VR7 867 aa25.93■■□□□ 1.74
TRAPPC4-208ENST00000527680 MICALL1Q8N3F8 863 aa25.93■■□□□ 1.74
TRAPPC4-208ENST00000527680 PHOSPHO2Q8TCD6 241 aa25.93■■□□□ 1.74
TRAPPC4-208ENST00000527680 SPATA33Q96N06 139 aa25.93■■□□□ 1.74
TRAPPC4-208ENST00000527680 GTF2IRD1Q9UHL9 959 aa25.93■■□□□ 1.74
TRAPPC4-208ENST00000527680 SGSM2O43147 1006 aa25.92■■□□□ 1.74
TRAPPC4-208ENST00000527680 PPFIA4O75335 1185 aa25.92■■□□□ 1.74
TRAPPC4-208ENST00000527680 CA3P07451 260 aa25.92■■□□□ 1.74
TRAPPC4-208ENST00000527680 ZNF286BP0CG31 522 aa25.92■■□□□ 1.74
TRAPPC4-208ENST00000527680 SELPP16109 830 aa25.92■■□□□ 1.74
TRAPPC4-208ENST00000527680 KCNJ6P48051 423 aa25.92■■□□□ 1.74
TRAPPC4-208ENST00000527680 GHRHRQ02643 423 aa25.92■■□□□ 1.74
TRAPPC4-208ENST00000527680 CERS4Q9HA82 394 aa25.92■■□□□ 1.74
TRAPPC4-208ENST00000527680 MLXIPQ9HAP2 919 aa25.92■■□□□ 1.74
TRAPPC4-208ENST00000527680 TAF6LQ9Y6J9 622 aa25.92■■□□□ 1.74
TRAPPC4-208ENST00000527680 GGPS1O95749 300 aa25.91■■□□□ 1.74
TRAPPC4-208ENST00000527680 TROAPQ12815 778 aa25.91■■□□□ 1.74
TRAPPC4-208ENST00000527680 CELF3Q5SZQ8 465 aaKnown RBP25.91■■□□□ 1.74
TRAPPC4-208ENST00000527680 MYSM1Q5VVJ2 828 aa25.91■■□□□ 1.74
TRAPPC4-208ENST00000527680 TET1Q8NFU7 2136 aa25.9■■□□□ 1.74
TRAPPC4-208ENST00000527680 CYTH3O43739 400 aa25.9■■□□□ 1.74
TRAPPC4-208ENST00000527680 RGS20O76081 388 aa25.9■■□□□ 1.74
TRAPPC4-208ENST00000527680 TGFB3P10600 412 aa25.9■■□□□ 1.74
TRAPPC4-208ENST00000527680 SLC35G1Q2M3R5 365 aa25.9■■□□□ 1.74
TRAPPC4-208ENST00000527680 LRRC8DQ7L1W4 858 aa25.9■■□□□ 1.74
TRAPPC4-208ENST00000527680 HERC6Q8IVU3 1022 aa25.9■■□□□ 1.74
TRAPPC4-208ENST00000527680 IL31RAQ8NI17 732 aa25.9■■□□□ 1.74
Retrieved 100 of 20,778 RNA–protein pairs in 24.3 ms