RNA–Protein interactions for RNA: ENST00000527599.1

CTNND1-217, Transcript of catenin delta 1, humanhuman

TSL 2

Gene CTNND1, Length 572 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTNND1-217ENST00000527599 ST13P5Q8NFI4 369 aaPredicted RBP11.6□□□□□ -0.55
CTNND1-217ENST00000527599 KCTD13Q8WZ19 329 aa11.6□□□□□ -0.55
CTNND1-217ENST00000527599 TRMT2BQ96GJ1 504 aaKnown RBP11.6□□□□□ -0.55
CTNND1-217ENST00000527599 TRIM55Q9BYV6 548 aa11.6□□□□□ -0.55
CTNND1-217ENST00000527599 CDIP1Q9H305 208 aa11.6□□□□□ -0.55
CTNND1-217ENST00000527599 MSCO60682 206 aa11.59□□□□□ -0.55
CTNND1-217ENST00000527599 HOXA5P20719 270 aa11.59□□□□□ -0.55
CTNND1-217ENST00000527599 DLX2Q07687 328 aaPredicted RBP11.59□□□□□ -0.55
CTNND1-217ENST00000527599 CACNB2Q08289 660 aaPredicted RBP11.59□□□□□ -0.55
CTNND1-217ENST00000527599 HSP90AA2PQ14568 343 aaPredicted RBP11.59□□□□□ -0.55
CTNND1-217ENST00000527599 MROH9Q5TGP6 573 aa11.59□□□□□ -0.55
CTNND1-217ENST00000527599 CKAP2LQ8IYA6 745 aa11.59□□□□□ -0.55
CTNND1-217ENST00000527599 SMARCC2Q8TAQ2 1214 aa11.59□□□□□ -0.55
CTNND1-217ENST00000527599 OSBP2Q969R2 916 aa11.59□□□□□ -0.55
CTNND1-217ENST00000527599 TMEM169Q96HH4 297 aa11.59□□□□□ -0.55
CTNND1-217ENST00000527599 C20orf173Q96LM9 149 aa11.59□□□□□ -0.55
CTNND1-217ENST00000527599 NOX5Q96PH1 765 aa11.59□□□□□ -0.55
CTNND1-217ENST00000527599 SYT3Q9BQG1 590 aa11.59□□□□□ -0.55
CTNND1-217ENST00000527599 FAN1Q9Y2M0 1017 aa11.59□□□□□ -0.55
CTNND1-217ENST00000527599 SLC6A11P48066 632 aa11.58□□□□□ -0.56
CTNND1-217ENST00000527599 CAP1Q01518 475 aa11.58□□□□□ -0.56
CTNND1-217ENST00000527599 YOD1Q5VVQ6 348 aaPredicted RBP11.58□□□□□ -0.56
CTNND1-217ENST00000527599 SPATC1Q76KD6 591 aa11.58□□□□□ -0.56
CTNND1-217ENST00000527599 ADGRG2Q8IZP9 1017 aa11.58□□□□□ -0.56
CTNND1-217ENST00000527599 SEC14L1Q92503 715 aa11.58□□□□□ -0.56
CTNND1-217ENST00000527599 AARSD1Q9BTE6 412 aaKnown RBP11.58□□□□□ -0.56
CTNND1-217ENST00000527599 ZCCHC4Q9H5U6 513 aa11.58□□□□□ -0.56
CTNND1-217ENST00000527599 PALD1Q9ULE6 856 aa11.58□□□□□ -0.56
CTNND1-217ENST00000527599 PRODHO43272 600 aa11.57□□□□□ -0.56
CTNND1-217ENST00000527599 MYO1BO43795 1136 aa11.57□□□□□ -0.56
CTNND1-217ENST00000527599 C8BP07358 591 aa11.57□□□□□ -0.56
CTNND1-217ENST00000527599 ATP2B1P20020 1258 aa11.57□□□□□ -0.56
CTNND1-217ENST00000527599 GTF2A2P52657 109 aa11.57□□□□□ -0.56
CTNND1-217ENST00000527599 LSAMPQ13449 338 aa11.57□□□□□ -0.56
CTNND1-217ENST00000527599 NTRK3Q16288 839 aa11.57□□□□□ -0.56
CTNND1-217ENST00000527599 SYT8Q8NBV8 401 aa11.57□□□□□ -0.56
CTNND1-217ENST00000527599 PMF1-BGLAPU3KQ54 211 aa11.57□□□□□ -0.56
CTNND1-217ENST00000527599 A0A1B0GTL3 188 aa11.56□□□□□ -0.56
CTNND1-217ENST00000527599 FGFR1P11362 822 aa11.56□□□□□ -0.56
CTNND1-217ENST00000527599 RBM10P98175 930 aaKnown RBP11.56□□□□□ -0.56
CTNND1-217ENST00000527599 SAPCD2Q86UD0 394 aa11.56□□□□□ -0.56
CTNND1-217ENST00000527599 FAM26EQ8N5C1 309 aa11.56□□□□□ -0.56
CTNND1-217ENST00000527599 ZNF526Q8TF50 670 aaPredicted RBP11.56□□□□□ -0.56
CTNND1-217ENST00000527599 AP5M1Q9H0R1 490 aa11.56□□□□□ -0.56
CTNND1-217ENST00000527599 XYLT2Q9H1B5 865 aa11.56□□□□□ -0.56
CTNND1-217ENST00000527599 RAPGEFL1Q9UHV5 662 aa11.56□□□□□ -0.56
CTNND1-217ENST00000527599 IQCA1LA6NCM1 817 aa11.55□□□□□ -0.56
CTNND1-217ENST00000527599 PABPC1P11940 636 aaKnown RBP11.55□□□□□ -0.56
CTNND1-217ENST00000527599 USP53Q70EK8 1073 aa11.55□□□□□ -0.56
CTNND1-217ENST00000527599 MIB1Q86YT6 1006 aa11.55□□□□□ -0.56
CTNND1-217ENST00000527599 NLGN1Q8N2Q7 840 aa11.55□□□□□ -0.56
CTNND1-217ENST00000527599 CHAMP1Q96JM3 812 aa11.55□□□□□ -0.56
CTNND1-217ENST00000527599 BLACEA4D250 179 aa11.54□□□□□ -0.56
CTNND1-217ENST00000527599 H7BY64 318 aa11.54□□□□□ -0.56
CTNND1-217ENST00000527599 MILR1Q7Z6M3 343 aa11.54□□□□□ -0.56
CTNND1-217ENST00000527599 FEZF2Q8TBJ5 459 aa11.54□□□□□ -0.56
CTNND1-217ENST00000527599 DDX11Q96FC9 970 aa11.54□□□□□ -0.56
CTNND1-217ENST00000527599 GPR27Q9NS67 375 aa11.54□□□□□ -0.56
CTNND1-217ENST00000527599 CLDND1Q9NY35 253 aa11.54□□□□□ -0.56
CTNND1-217ENST00000527599 PPARGC1AQ9UBK2 798 aaKnown RBP11.54□□□□□ -0.56
CTNND1-217ENST00000527599 A0A0G2JLL6 359 aaPredicted RBP11.53□□□□□ -0.56
CTNND1-217ENST00000527599 PDPK1O15530 556 aa11.53□□□□□ -0.56
CTNND1-217ENST00000527599 GTF2F1P35269 517 aaKnown RBP eCLIP11.53□□□□□ -0.56
CTNND1-217ENST00000527599 LILRA6Q6PI73 481 aa11.53□□□□□ -0.56
CTNND1-217ENST00000527599 KCNT2Q6UVM3 1135 aa11.53□□□□□ -0.56
CTNND1-217ENST00000527599 PHF20Q9BVI0 1012 aa11.53□□□□□ -0.56
CTNND1-217ENST00000527599 ADCY3O60266 1144 aa11.52□□□□□ -0.57
CTNND1-217ENST00000527599 NSMFQ6X4W1 530 aa11.52□□□□□ -0.57
CTNND1-217ENST00000527599 ZNF669Q96BR6 464 aaPredicted RBP11.52□□□□□ -0.57
CTNND1-217ENST00000527599 GORASP1Q9BQQ3 440 aa11.52□□□□□ -0.57
CTNND1-217ENST00000527599 SPATA9Q9BWV2 254 aa11.52□□□□□ -0.57
CTNND1-217ENST00000527599 SPATA6Q9NWH7 488 aaPredicted RBP11.52□□□□□ -0.57
CTNND1-217ENST00000527599 COA3Q9Y2R0 106 aaPredicted RBP11.52□□□□□ -0.57
CTNND1-217ENST00000527599 OTOL1A6NHN0 477 aaPredicted RBP11.51□□□□□ -0.57
CTNND1-217ENST00000527599 SLURP1P55000 103 aa11.51□□□□□ -0.57
CTNND1-217ENST00000527599 SERINC3Q13530 473 aa11.51□□□□□ -0.57
CTNND1-217ENST00000527599 LIPIQ6XZB0 460 aa11.51□□□□□ -0.57
CTNND1-217ENST00000527599 ETV3LQ6ZN32 361 aa11.51□□□□□ -0.57
CTNND1-217ENST00000527599 PPIL4Q8WUA2 492 aaKnown RBP eCLIP11.51□□□□□ -0.57
CTNND1-217ENST00000527599 CCDC113Q9H0I3 377 aa11.51□□□□□ -0.57
CTNND1-217ENST00000527599 PPP1R1BQ9UD71 204 aaPredicted RBP11.51□□□□□ -0.57
CTNND1-217ENST00000527599 TRAV20A0A0B4J274 112 aa11.5□□□□□ -0.57
CTNND1-217ENST00000527599 SH3D21A4FU49 640 aa11.5□□□□□ -0.57
CTNND1-217ENST00000527599 CCDC85CA6NKD9 419 aa11.5□□□□□ -0.57
CTNND1-217ENST00000527599 TADA3O75528 432 aa11.5□□□□□ -0.57
CTNND1-217ENST00000527599 RBL2Q08999 1139 aa11.5□□□□□ -0.57
CTNND1-217ENST00000527599 RASGRF1Q13972 1273 aa11.5□□□□□ -0.57
CTNND1-217ENST00000527599 NBPF6Q5VWK0 638 aa11.5□□□□□ -0.57
CTNND1-217ENST00000527599 LRRC47Q8N1G4 583 aaKnown RBP11.5□□□□□ -0.57
CTNND1-217ENST00000527599 NBPF4Q96M43 638 aa11.5□□□□□ -0.57
CTNND1-217ENST00000527599 JAM3Q9BX67 310 aa11.5□□□□□ -0.57
CTNND1-217ENST00000527599 LUC7LQ9NQ29 371 aaKnown RBP11.5□□□□□ -0.57
CTNND1-217ENST00000527599 PFDN2Q9UHV9 154 aa11.5□□□□□ -0.57
CTNND1-217ENST00000527599 U2SURPO15042 1029 aaKnown RBP11.49□□□□□ -0.57
CTNND1-217ENST00000527599 DIAPH1O60610 1272 aaKnown RBP11.49□□□□□ -0.57
CTNND1-217ENST00000527599 EMC4Q5J8M3 183 aa11.49□□□□□ -0.57
CTNND1-217ENST00000527599 RSPO2Q6UXX9 243 aaPredicted RBP11.49□□□□□ -0.57
CTNND1-217ENST00000527599 FAM126BQ8IXS8 530 aa11.49□□□□□ -0.57
CTNND1-217ENST00000527599 LINC00482Q8N8I6 264 aa11.49□□□□□ -0.57
CTNND1-217ENST00000527599 ZNF652Q9Y2D9 606 aa11.49□□□□□ -0.57
Retrieved 100 of 20,778 RNA–protein pairs in 27.8 ms