RNA–Protein interactions for RNA: ENST00000527586.1

VPS26B-204, Transcript of VPS26, retromer complex component B, humanhuman

TSL 3

Gene VPS26B, Length 800 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS26B-204ENST00000527586 GDF6Q6KF10 455 aaPredicted RBP8.54□□□□□ -1.04
VPS26B-204ENST00000527586 TAPT1Q6NXT6 567 aa8.54□□□□□ -1.04
VPS26B-204ENST00000527586 SYCE2Q6PIF2 218 aa8.54□□□□□ -1.04
VPS26B-204ENST00000527586 EEPD1Q7L9B9 569 aa8.54□□□□□ -1.04
VPS26B-204ENST00000527586 POTEDQ86YR6 584 aa8.54□□□□□ -1.04
VPS26B-204ENST00000527586 CCDC146Q8IYE0 955 aa8.54□□□□□ -1.04
VPS26B-204ENST00000527586 TMEFF1Q8IYR6 380 aa8.54□□□□□ -1.04
VPS26B-204ENST00000527586 TDRD5Q8NAT2 981 aaKnown RBP8.54□□□□□ -1.04
VPS26B-204ENST00000527586 SPPL3Q8TCT6 385 aa8.54□□□□□ -1.04
VPS26B-204ENST00000527586 GATA6Q92908 595 aa8.54□□□□□ -1.04
VPS26B-204ENST00000527586 CLP1Q92989 425 aaKnown RBP8.54□□□□□ -1.04
VPS26B-204ENST00000527586 PLVAPQ9BX97 442 aa8.54□□□□□ -1.04
VPS26B-204ENST00000527586 POMKQ9H5K3 350 aa8.54□□□□□ -1.04
VPS26B-204ENST00000527586 AATFQ9NY61 560 aaKnown RBP eCLIP8.54□□□□□ -1.04
VPS26B-204ENST00000527586 RAI14Q9P0K7 980 aa8.54□□□□□ -1.04
VPS26B-204ENST00000527586 DLGAP2Q9P1A6 1054 aa8.54□□□□□ -1.04
VPS26B-204ENST00000527586 PCDHGA2Q9Y5H1 932 aa8.54□□□□□ -1.04
VPS26B-204ENST00000527586 FANCMQ8IYD8 2048 aa8.54□□□□□ -1.04
VPS26B-204ENST00000527586 DMXL2Q8TDJ6 3036 aa8.54□□□□□ -1.04
VPS26B-204ENST00000527586 KRBA1A5PL33 1030 aa8.53□□□□□ -1.04
VPS26B-204ENST00000527586 F6X3S4 739 aa8.53□□□□□ -1.04
VPS26B-204ENST00000527586 ITGB1P05556 798 aa8.53□□□□□ -1.04
VPS26B-204ENST00000527586 HOXD8P13378 290 aaPredicted RBP8.53□□□□□ -1.04
VPS26B-204ENST00000527586 CNTN2Q02246 1040 aa8.53□□□□□ -1.04
VPS26B-204ENST00000527586 FOXC1Q12948 553 aa8.53□□□□□ -1.04
VPS26B-204ENST00000527586 TDGQ13569 410 aa8.53□□□□□ -1.04
VPS26B-204ENST00000527586 CCDC6Q16204 474 aa8.53□□□□□ -1.04
VPS26B-204ENST00000527586 ZNF618Q5T7W0 954 aa8.53□□□□□ -1.04
VPS26B-204ENST00000527586 TRAF7Q6Q0C0 670 aa8.53□□□□□ -1.04
VPS26B-204ENST00000527586 FBXO16Q8IX29 292 aaPredicted RBP8.53□□□□□ -1.04
VPS26B-204ENST00000527586 POF1BQ8WVV4 589 aa8.53□□□□□ -1.04
VPS26B-204ENST00000527586 MAP4K1Q92918 833 aa8.53□□□□□ -1.04
VPS26B-204ENST00000527586 TEX13BQ9BXU2 312 aa8.53□□□□□ -1.04
VPS26B-204ENST00000527586 BICC1Q9H694 974 aaKnown RBP8.53□□□□□ -1.04
VPS26B-204ENST00000527586 TBC1D17Q9HA65 648 aa8.53□□□□□ -1.04
VPS26B-204ENST00000527586 IFT57Q9NWB7 429 aa8.53□□□□□ -1.04
VPS26B-204ENST00000527586 PPP1R9AQ9ULJ8 1098 aa8.53□□□□□ -1.04
VPS26B-204ENST00000527586 DUSP12Q9UNI6 340 aa8.53□□□□□ -1.04
VPS26B-204ENST00000527586 DDX49Q9Y6V7 483 aaKnown RBP8.53□□□□□ -1.04
VPS26B-204ENST00000527586 MICAL3Q7RTP6 2002 aa8.53□□□□□ -1.04
VPS26B-204ENST00000527586 LOC101059915A0A1B0GWI6 518 aaPredicted RBP8.52□□□□□ -1.05
VPS26B-204ENST00000527586 ASB14A6NK59 587 aa8.52□□□□□ -1.05
VPS26B-204ENST00000527586 EYA2O00167 538 aa8.52□□□□□ -1.05
VPS26B-204ENST00000527586 MPHOSPH10O00566 681 aaKnown RBP8.52□□□□□ -1.05
VPS26B-204ENST00000527586 ZBTB22O15209 634 aa8.52□□□□□ -1.05
VPS26B-204ENST00000527586 WDR46O15213 610 aaKnown RBP8.52□□□□□ -1.05
VPS26B-204ENST00000527586 BAG3O95817 575 aa8.52□□□□□ -1.05
VPS26B-204ENST00000527586 SRGAP2BP0DMP2 458 aa8.52□□□□□ -1.05
VPS26B-204ENST00000527586 PLA2G2AP14555 144 aa8.52□□□□□ -1.05
VPS26B-204ENST00000527586 PLCG2P16885 1265 aa8.52□□□□□ -1.05
VPS26B-204ENST00000527586 ADORA1P30542 326 aa8.52□□□□□ -1.05
VPS26B-204ENST00000527586 GNAI1P63096 354 aa8.52□□□□□ -1.05
VPS26B-204ENST00000527586 CSTF1Q05048 431 aaKnown RBP8.52□□□□□ -1.05
VPS26B-204ENST00000527586 DUSP6Q16828 381 aa8.52□□□□□ -1.05
VPS26B-204ENST00000527586 PRR23CQ6ZRP0 262 aa8.52□□□□□ -1.05
VPS26B-204ENST00000527586 TBC1D9Q6ZT07 1266 aa8.52□□□□□ -1.05
VPS26B-204ENST00000527586 KIAA1211Q6ZU35 1233 aa8.52□□□□□ -1.05
VPS26B-204ENST00000527586 PLCD3Q8N3E9 789 aa8.52□□□□□ -1.05
VPS26B-204ENST00000527586 MICAL1Q8TDZ2 1067 aa8.52□□□□□ -1.05
VPS26B-204ENST00000527586 P2RX5Q93086 422 aa8.52□□□□□ -1.05
VPS26B-204ENST00000527586 NECTIN4Q96NY8 510 aa8.52□□□□□ -1.05
VPS26B-204ENST00000527586 CDCA3Q99618 268 aaPredicted RBP8.52□□□□□ -1.05
VPS26B-204ENST00000527586 LSM14BQ9BX40 385 aaKnown RBP8.52□□□□□ -1.05
VPS26B-204ENST00000527586 SEMA4GQ9NTN9 838 aa8.52□□□□□ -1.05
VPS26B-204ENST00000527586 SERPINB13Q9UIV8 391 aa8.52□□□□□ -1.05
VPS26B-204ENST00000527586 SIT1Q9Y3P8 196 aa8.52□□□□□ -1.05
VPS26B-204ENST00000527586 GPSM3Q9Y4H4 160 aa8.52□□□□□ -1.05
VPS26B-204ENST00000527586 PIEZO2Q9H5I5 2752 aa8.52□□□□□ -1.05
VPS26B-204ENST00000527586 PDS5AQ29RF7 1337 aaKnown RBP8.52□□□□□ -1.05
VPS26B-204ENST00000527586 LAMA5O15230 3695 aa8.51□□□□□ -1.05
VPS26B-204ENST00000527586 FSD2A1L4K1 749 aa8.51□□□□□ -1.05
VPS26B-204ENST00000527586 TM4SF5O14894 197 aa8.51□□□□□ -1.05
VPS26B-204ENST00000527586 MAP3K13O43283 966 aa8.51□□□□□ -1.05
VPS26B-204ENST00000527586 LILRB5O75023 590 aa8.51□□□□□ -1.05
VPS26B-204ENST00000527586 KCNK5O95279 499 aa8.51□□□□□ -1.05
VPS26B-204ENST00000527586 MMP3P08254 477 aa8.51□□□□□ -1.05
VPS26B-204ENST00000527586 CFHP08603 1231 aa8.51□□□□□ -1.05
VPS26B-204ENST00000527586 SHMT1P34896 483 aa8.51□□□□□ -1.05
VPS26B-204ENST00000527586 LPAL2Q16609 132 aa8.51□□□□□ -1.05
VPS26B-204ENST00000527586 CCDC27Q2M243 656 aa8.51□□□□□ -1.05
VPS26B-204ENST00000527586 COL28A1Q2UY09 1125 aa8.51□□□□□ -1.05
VPS26B-204ENST00000527586 RABL6Q3YEC7 729 aaPredicted RBP8.51□□□□□ -1.05
VPS26B-204ENST00000527586 DUSP28Q4G0W2 176 aa8.51□□□□□ -1.05
VPS26B-204ENST00000527586 BRDTQ58F21 947 aaPredicted RBP8.51□□□□□ -1.05
VPS26B-204ENST00000527586 TMEM184AQ6ZMB5 413 aa8.51□□□□□ -1.05
VPS26B-204ENST00000527586 ATG9AQ7Z3C6 839 aa8.51□□□□□ -1.05
VPS26B-204ENST00000527586 ANKRD44Q8N8A2 993 aa8.51□□□□□ -1.05
VPS26B-204ENST00000527586 ZBTB44Q8NCP5 570 aa8.51□□□□□ -1.05
VPS26B-204ENST00000527586 OR6J1Q8NGC5 347 aa8.51□□□□□ -1.05
VPS26B-204ENST00000527586 VCPKMTQ9H867 229 aa8.51□□□□□ -1.05
VPS26B-204ENST00000527586 RXFP3Q9NSD7 469 aa8.51□□□□□ -1.05
VPS26B-204ENST00000527586 ZSCAN32Q9NX65 697 aa8.51□□□□□ -1.05
VPS26B-204ENST00000527586 WNT16Q9UBV4 365 aa8.51□□□□□ -1.05
VPS26B-204ENST00000527586 FBXO4Q9UKT5 387 aa8.51□□□□□ -1.05
VPS26B-204ENST00000527586 TRIP12Q14669 1992 aaPredicted RBP8.51□□□□□ -1.05
VPS26B-204ENST00000527586 NLRC5Q86WI3 1866 aa8.51□□□□□ -1.05
VPS26B-204ENST00000527586 EMSYQ7Z589 1322 aa8.51□□□□□ -1.05
VPS26B-204ENST00000527586 ADGRA3Q8IWK6 1321 aa8.51□□□□□ -1.05
VPS26B-204ENST00000527586 CACNA1IQ9P0X4 2223 aa8.5□□□□□ -1.05
VPS26B-204ENST00000527586 WDFY3Q8IZQ1 3526 aa8.5□□□□□ -1.05
Retrieved 100 of 20,778 RNA–protein pairs in 37.4 ms