RNA–Protein interactions for RNA: ENST00000527528.1

AP003066.1-201, humanhuman

TSL 1 (best) BASIC

Gene AP003066.1, Length 1,647 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
AP003066.1-201ENST00000527528 PLA2G6O60733 806 aa8.72□□□□□ -1.01
AP003066.1-201ENST00000527528 CD4P01730 458 aa8.72□□□□□ -1.01
AP003066.1-201ENST00000527528 ALAS1P13196 640 aa8.72□□□□□ -1.01
AP003066.1-201ENST00000527528 CYP2C18P33260 490 aa8.72□□□□□ -1.01
AP003066.1-201ENST00000527528 PPARAQ07869 468 aa8.72□□□□□ -1.01
AP003066.1-201ENST00000527528 ITGA7Q13683 1181 aa8.72□□□□□ -1.01
AP003066.1-201ENST00000527528 RASIP1Q5U651 963 aa8.72□□□□□ -1.01
AP003066.1-201ENST00000527528 TSHZ3Q63HK5 1081 aa8.72□□□□□ -1.01
AP003066.1-201ENST00000527528 IQSEC1Q6DN90 963 aa8.72□□□□□ -1.01
AP003066.1-201ENST00000527528 CXCL17Q6UXB2 119 aa8.72□□□□□ -1.01
AP003066.1-201ENST00000527528 C16orf59Q7L2K0 433 aa8.72□□□□□ -1.01
AP003066.1-201ENST00000527528 RPUSD2Q8IZ73 545 aaKnown RBP8.72□□□□□ -1.01
AP003066.1-201ENST00000527528 ATXN2LQ8WWM7 1075 aaKnown RBP8.72□□□□□ -1.01
AP003066.1-201ENST00000527528 PPM1EQ8WY54 764 aa8.72□□□□□ -1.01
AP003066.1-201ENST00000527528 HERVK_113Q902F9 699 aa8.72□□□□□ -1.01
AP003066.1-201ENST00000527528 AGBL1Q96MI9 1066 aa8.72□□□□□ -1.01
AP003066.1-201ENST00000527528 TSPAN18Q96SJ8 248 aa8.72□□□□□ -1.01
AP003066.1-201ENST00000527528 KATNBL1Q9H079 304 aa8.72□□□□□ -1.01
AP003066.1-201ENST00000527528 FEZ2Q9UHY8 353 aaPredicted RBP8.72□□□□□ -1.01
AP003066.1-201ENST00000527528 STX8Q9UNK0 236 aa8.72□□□□□ -1.01
AP003066.1-201ENST00000527528 Q9Y3F1 56 aa8.72□□□□□ -1.01
AP003066.1-201ENST00000527528 NUB1Q9Y5A7 615 aa8.72□□□□□ -1.01
AP003066.1-201ENST00000527528 SOWAHBA6NEL2 793 aa8.71□□□□□ -1.02
AP003066.1-201ENST00000527528 TNFRSF10AO00220 468 aa8.71□□□□□ -1.02
AP003066.1-201ENST00000527528 CTAGE5O15320 804 aa8.71□□□□□ -1.02
AP003066.1-201ENST00000527528 RCSD1Q6JBY9 416 aa8.71□□□□□ -1.02
AP003066.1-201ENST00000527528 USP38Q8NB14 1042 aa8.71□□□□□ -1.02
AP003066.1-201ENST00000527528 MPHOSPH6Q99547 160 aaKnown RBP8.71□□□□□ -1.02
AP003066.1-201ENST00000527528 PRDM12Q9H4Q4 367 aa8.71□□□□□ -1.02
AP003066.1-201ENST00000527528 SLC28A3Q9HAS3 691 aa8.71□□□□□ -1.02
AP003066.1-201ENST00000527528 VTA1Q9NP79 307 aa8.71□□□□□ -1.02
AP003066.1-201ENST00000527528 THEGQ9P2T0 379 aa8.71□□□□□ -1.02
AP003066.1-201ENST00000527528 ADD3Q9UEY8 706 aaKnown RBP8.71□□□□□ -1.02
AP003066.1-201ENST00000527528 CCPG1Q9ULG6 757 aa8.71□□□□□ -1.02
AP003066.1-201ENST00000527528 GNEQ9Y223 722 aaKnown RBP8.71□□□□□ -1.02
AP003066.1-201ENST00000527528 MYH4Q9Y623 1939 aa8.7□□□□□ -1.02
AP003066.1-201ENST00000527528 C11orf97A0A1B0GVM6 126 aaPredicted RBP8.7□□□□□ -1.02
AP003066.1-201ENST00000527528 GRXCR1A8MXD5 290 aa8.7□□□□□ -1.02
AP003066.1-201ENST00000527528 SUPT20HL2P0C7V6 817 aa8.7□□□□□ -1.02
AP003066.1-201ENST00000527528 SMPD1P17405 629 aa8.7□□□□□ -1.02
AP003066.1-201ENST00000527528 IGFBP4P22692 258 aa8.7□□□□□ -1.02
AP003066.1-201ENST00000527528 MLLT3P42568 568 aaPredicted RBP8.7□□□□□ -1.02
AP003066.1-201ENST00000527528 BRDTQ58F21 947 aaPredicted RBP8.7□□□□□ -1.02
AP003066.1-201ENST00000527528 NSMFQ6X4W1 530 aa8.7□□□□□ -1.02
AP003066.1-201ENST00000527528 KCTD1Q719H9 257 aa8.7□□□□□ -1.02
AP003066.1-201ENST00000527528 APBB1IPQ7Z5R6 666 aaPredicted RBP8.7□□□□□ -1.02
AP003066.1-201ENST00000527528 SDR16C5Q8N3Y7 309 aa8.7□□□□□ -1.02
AP003066.1-201ENST00000527528 SLC43A3Q8NBI5 491 aa8.7□□□□□ -1.02
AP003066.1-201ENST00000527528 CHMP4CQ96CF2 233 aa8.7□□□□□ -1.02
AP003066.1-201ENST00000527528 CYP39A1Q9NYL5 469 aa8.7□□□□□ -1.02
AP003066.1-201ENST00000527528 PNMA2Q9UL42 364 aa8.7□□□□□ -1.02
AP003066.1-201ENST00000527528 ZNF536O15090 1300 aa8.7□□□□□ -1.02
AP003066.1-201ENST00000527528 ZBBXA8MT70 800 aa8.69□□□□□ -1.02
AP003066.1-201ENST00000527528 MARCH6O60337 910 aa8.69□□□□□ -1.02
AP003066.1-201ENST00000527528 RANBP6O60518 1105 aaKnown RBP8.69□□□□□ -1.02
AP003066.1-201ENST00000527528 ICAM1P05362 532 aa8.69□□□□□ -1.02
AP003066.1-201ENST00000527528 PFKMP08237 780 aa8.69□□□□□ -1.02
AP003066.1-201ENST00000527528 CCL23P55773 120 aa8.69□□□□□ -1.02
AP003066.1-201ENST00000527528 MRPS5P82675 430 aaKnown RBP8.69□□□□□ -1.02
AP003066.1-201ENST00000527528 ZKSCAN8Q15776 578 aaPredicted RBP8.69□□□□□ -1.02
AP003066.1-201ENST00000527528 ZMYM1Q5SVZ6 1142 aa8.69□□□□□ -1.02
AP003066.1-201ENST00000527528 C20orf194Q5TEA3 1177 aa8.69□□□□□ -1.02
AP003066.1-201ENST00000527528 KIAA1211Q6ZU35 1233 aa8.69□□□□□ -1.02
AP003066.1-201ENST00000527528 EEPD1Q7L9B9 569 aa8.69□□□□□ -1.02
AP003066.1-201ENST00000527528 OTOP2Q7RTS6 562 aa8.69□□□□□ -1.02
AP003066.1-201ENST00000527528 MTERF4Q7Z6M4 381 aaKnown RBP8.69□□□□□ -1.02
AP003066.1-201ENST00000527528 FBXO16Q8IX29 292 aaPredicted RBP8.69□□□□□ -1.02
AP003066.1-201ENST00000527528 DCAF4Q8WV16 495 aa8.69□□□□□ -1.02
AP003066.1-201ENST00000527528 ASB2Q96Q27 587 aa8.69□□□□□ -1.02
AP003066.1-201ENST00000527528 NOC4LQ9BVI4 516 aaKnown RBP8.69□□□□□ -1.02
AP003066.1-201ENST00000527528 NKX2-4Q9H2Z4 354 aa8.69□□□□□ -1.02
AP003066.1-201ENST00000527528 POLR3EQ9NVU0 708 aa8.69□□□□□ -1.02
AP003066.1-201ENST00000527528 PRR12Q9ULL5 1215 aa8.69□□□□□ -1.02
AP003066.1-201ENST00000527528 SLC4A7Q9Y6M7 1214 aa8.69□□□□□ -1.02
AP003066.1-201ENST00000527528 ASTN1O14525 1302 aa8.69□□□□□ -1.02
AP003066.1-201ENST00000527528 RAD50Q92878 1312 aa8.69□□□□□ -1.02
AP003066.1-201ENST00000527528 TTC28Q96AY4 2481 aa8.69□□□□□ -1.02
AP003066.1-201ENST00000527528 B4DLN1 442 aa8.69□□□□□ -1.02
AP003066.1-201ENST00000527528 ZNF500O60304 480 aaPredicted RBP8.69□□□□□ -1.02
AP003066.1-201ENST00000527528 B4GALT4O60513 344 aa8.69□□□□□ -1.02
AP003066.1-201ENST00000527528 CPT1AP50416 773 aa8.69□□□□□ -1.02
AP003066.1-201ENST00000527528 MRPL12P52815 198 aaKnown RBP8.69□□□□□ -1.02
AP003066.1-201ENST00000527528 SNAP25P60880 206 aa8.69□□□□□ -1.02
AP003066.1-201ENST00000527528 PSMC6P62333 389 aa8.69□□□□□ -1.02
AP003066.1-201ENST00000527528 CCDC85BQ15834 202 aaPredicted RBP8.69□□□□□ -1.02
AP003066.1-201ENST00000527528 MUM1L1Q5H9M0 696 aa8.69□□□□□ -1.02
AP003066.1-201ENST00000527528 TAPT1Q6NXT6 567 aa8.69□□□□□ -1.02
AP003066.1-201ENST00000527528 NME8Q8N427 588 aa8.69□□□□□ -1.02
AP003066.1-201ENST00000527528 SEC62Q99442 399 aaKnown RBP8.69□□□□□ -1.02
AP003066.1-201ENST00000527528 MTA3Q9BTC8 594 aa8.69□□□□□ -1.02
AP003066.1-201ENST00000527528 TRPV6Q9H1D0 765 aa8.69□□□□□ -1.02
AP003066.1-201ENST00000527528 PDGFCQ9NRA1 345 aa8.69□□□□□ -1.02
AP003066.1-201ENST00000527528 TOMM22Q9NS69 142 aa8.69□□□□□ -1.02
AP003066.1-201ENST00000527528 CXXC1Q9P0U4 656 aaPredicted RBP8.69□□□□□ -1.02
AP003066.1-201ENST00000527528 DDX52Q9Y2R4 599 aaKnown RBP eCLIP8.69□□□□□ -1.02
AP003066.1-201ENST00000527528 PCDHA11Q9Y5I1 949 aa8.69□□□□□ -1.02
AP003066.1-201ENST00000527528 MRVI1Q9Y6F6 885 aa8.69□□□□□ -1.02
AP003066.1-201ENST00000527528 ACTN1P12814 892 aa8.68□□□□□ -1.02
AP003066.1-201ENST00000527528 ATP2A2P16615 1042 aaKnown RBP8.68□□□□□ -1.02
AP003066.1-201ENST00000527528 MX1P20591 662 aa8.68□□□□□ -1.02
Retrieved 100 of 20,778 RNA–protein pairs in 31.6 ms