RNA–Protein interactions for RNA: ENST00000527497.1

NXF1-205, Transcript of nuclear RNA export factor 1, humanhuman

TSL 2

Gene NXF1, Length 529 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NXF1-205ENST00000527497 FOXR1Q6PIV2 292 aa7.32□□□□□ -1.24
NXF1-205ENST00000527497 SAPCD2Q86UD0 394 aa7.32□□□□□ -1.24
NXF1-205ENST00000527497 RASSF3Q86WH2 238 aa7.32□□□□□ -1.24
NXF1-205ENST00000527497 SPATA5Q8NB90 893 aa7.32□□□□□ -1.24
NXF1-205ENST00000527497 PCDH19Q8TAB3 1148 aa7.32□□□□□ -1.24
NXF1-205ENST00000527497 SGCZQ96LD1 299 aa7.32□□□□□ -1.24
NXF1-205ENST00000527497 CCDC138Q96M89 665 aa7.32□□□□□ -1.24
NXF1-205ENST00000527497 ZDHHC15Q96MV8 337 aa7.32□□□□□ -1.24
NXF1-205ENST00000527497 MDFIQ99750 246 aa7.32□□□□□ -1.24
NXF1-205ENST00000527497 CARD10Q9BWT7 1032 aa7.32□□□□□ -1.24
NXF1-205ENST00000527497 ATXN3LQ9H3M9 355 aa7.32□□□□□ -1.24
NXF1-205ENST00000527497 RNF112Q9ULX5 631 aa7.32□□□□□ -1.24
NXF1-205ENST00000527497 NPFFR2Q9Y5X5 522 aa7.32□□□□□ -1.24
NXF1-205ENST00000527497 GSTA4O15217 222 aa7.31□□□□□ -1.24
NXF1-205ENST00000527497 PQBP1O60828 265 aaKnown RBP7.31□□□□□ -1.24
NXF1-205ENST00000527497 H2AFYO75367 372 aaKnown RBP7.31□□□□□ -1.24
NXF1-205ENST00000527497 SRGAP2CP0DJJ0 459 aa7.31□□□□□ -1.24
NXF1-205ENST00000527497 NLRP12P59046 1061 aa7.31□□□□□ -1.24
NXF1-205ENST00000527497 FAM193AP78312 1265 aa7.31□□□□□ -1.24
NXF1-205ENST00000527497 SCRN1Q12765 414 aa7.31□□□□□ -1.24
NXF1-205ENST00000527497 ZNF267Q14586 743 aaPredicted RBP7.31□□□□□ -1.24
NXF1-205ENST00000527497 TESK1Q15569 626 aa7.31□□□□□ -1.24
NXF1-205ENST00000527497 OVCH1Q7RTY7 1134 aa7.31□□□□□ -1.24
NXF1-205ENST00000527497 SKAP1Q86WV1 359 aa7.31□□□□□ -1.24
NXF1-205ENST00000527497 CCDC155Q8N6L0 562 aa7.31□□□□□ -1.24
NXF1-205ENST00000527497 C1orf131Q8NDD1 294 aaKnown RBP7.31□□□□□ -1.24
NXF1-205ENST00000527497 PANK1Q8TE04 598 aa7.31□□□□□ -1.24
NXF1-205ENST00000527497 SSH1Q8WYL5 1049 aa7.31□□□□□ -1.24
NXF1-205ENST00000527497 TBATAQ96M53 351 aa7.31□□□□□ -1.24
NXF1-205ENST00000527497 ASPNQ9BXN1 380 aa7.31□□□□□ -1.24
NXF1-205ENST00000527497 FOXQ1Q9C009 403 aa7.31□□□□□ -1.24
NXF1-205ENST00000527497 RSAD1Q9HA92 442 aa7.31□□□□□ -1.24
NXF1-205ENST00000527497 DISC1Q9NRI5 854 aa7.31□□□□□ -1.24
NXF1-205ENST00000527497 CEP131Q9UPN4 1083 aa7.31□□□□□ -1.24
NXF1-205ENST00000527497 COL17A1Q9UMD9 1497 aaPredicted RBP7.3□□□□□ -1.24
NXF1-205ENST00000527497 GOLGA8AA7E2F4 631 aa7.3□□□□□ -1.24
NXF1-205ENST00000527497 GOLGA8BA8MQT2 603 aa7.3□□□□□ -1.24
NXF1-205ENST00000527497 C2CD2LO14523 706 aa7.3□□□□□ -1.24
NXF1-205ENST00000527497 WNT9AO14904 365 aa7.3□□□□□ -1.24
NXF1-205ENST00000527497 MEFVO15553 781 aaPredicted RBP7.3□□□□□ -1.24
NXF1-205ENST00000527497 TGM5O43548 720 aa7.3□□□□□ -1.24
NXF1-205ENST00000527497 VAMP4O75379 141 aa7.3□□□□□ -1.24
NXF1-205ENST00000527497 RNASEH2AO75792 299 aaKnown RBP7.3□□□□□ -1.24
NXF1-205ENST00000527497 AVPP01185 164 aa7.3□□□□□ -1.24
NXF1-205ENST00000527497 ADH6P28332 368 aa7.3□□□□□ -1.24
NXF1-205ENST00000527497 GPR3P46089 330 aa7.3□□□□□ -1.24
NXF1-205ENST00000527497 PHC1P78364 1004 aa7.3□□□□□ -1.24
NXF1-205ENST00000527497 POU5F1Q01860 360 aaKnown RBP7.3□□□□□ -1.24
NXF1-205ENST00000527497 IFIT5Q13325 482 aaKnown RBP7.3□□□□□ -1.24
NXF1-205ENST00000527497 TERF2Q15554 542 aa7.3□□□□□ -1.24
NXF1-205ENST00000527497 PLA2G4EQ3MJ16 856 aa7.3□□□□□ -1.24
NXF1-205ENST00000527497 LVRNQ6Q4G3 990 aa7.3□□□□□ -1.24
NXF1-205ENST00000527497 IGF2-ASQ6U949 168 aa7.3□□□□□ -1.24
NXF1-205ENST00000527497 LBX2Q6XYB7 198 aa7.3□□□□□ -1.24
NXF1-205ENST00000527497 CCDC149Q6ZUS6 474 aa7.3□□□□□ -1.24
NXF1-205ENST00000527497 DRC7Q8IY82 874 aa7.3□□□□□ -1.24
NXF1-205ENST00000527497 CLASRPQ8N2M8 674 aaKnown RBP7.3□□□□□ -1.24
NXF1-205ENST00000527497 MIER2Q8N344 545 aa7.3□□□□□ -1.24
NXF1-205ENST00000527497 C2orf69Q8N8R5 385 aa7.3□□□□□ -1.24
NXF1-205ENST00000527497 CCDC89Q8N998 374 aa7.3□□□□□ -1.24
NXF1-205ENST00000527497 MFSD2AQ8NA29 543 aa7.3□□□□□ -1.24
NXF1-205ENST00000527497 ZBTB34Q8NCN2 500 aa7.3□□□□□ -1.24
NXF1-205ENST00000527497 DNAJB8Q8NHS0 232 aa7.3□□□□□ -1.24
NXF1-205ENST00000527497 DEPTORQ8TB45 409 aa7.3□□□□□ -1.24
NXF1-205ENST00000527497 DIS3LQ8TF46 1054 aaKnown RBP7.3□□□□□ -1.24
NXF1-205ENST00000527497 LMBR1Q8WVP7 490 aa7.3□□□□□ -1.24
NXF1-205ENST00000527497 CCT6BQ92526 530 aa7.3□□□□□ -1.24
NXF1-205ENST00000527497 HPS3Q969F9 1004 aa7.3□□□□□ -1.24
NXF1-205ENST00000527497 FBXL18Q96ME1 805 aa7.3□□□□□ -1.24
NXF1-205ENST00000527497 FANCD2OSQ96PS1 177 aa7.3□□□□□ -1.24
NXF1-205ENST00000527497 ACO2Q99798 780 aaKnown RBP7.3□□□□□ -1.24
NXF1-205ENST00000527497 H2AFY2Q9P0M6 372 aaPredicted RBP7.3□□□□□ -1.24
NXF1-205ENST00000527497 PPP1R9AQ9ULJ8 1098 aa7.3□□□□□ -1.24
NXF1-205ENST00000527497 ST14Q9Y5Y6 855 aa7.3□□□□□ -1.24
NXF1-205ENST00000527497 hCG_1642624A0A1W2PR95 340 aa7.29□□□□□ -1.24
NXF1-205ENST00000527497 FAM227AF5H4B4 570 aa7.29□□□□□ -1.24
NXF1-205ENST00000527497 GPR25O00155 361 aa7.29□□□□□ -1.24
NXF1-205ENST00000527497 YBX3P16989 372 aaKnown RBP eCLIP7.29□□□□□ -1.24
NXF1-205ENST00000527497 LSP1P33241 339 aa7.29□□□□□ -1.24
NXF1-205ENST00000527497 LTBRP36941 435 aa7.29□□□□□ -1.24
NXF1-205ENST00000527497 ADKP55263 362 aaKnown RBP7.29□□□□□ -1.24
NXF1-205ENST00000527497 DDX10Q13206 875 aaKnown RBP7.29□□□□□ -1.24
NXF1-205ENST00000527497 TRIM14Q14142 442 aa7.29□□□□□ -1.24
NXF1-205ENST00000527497 PRR16Q569H4 304 aa7.29□□□□□ -1.24
NXF1-205ENST00000527497 MZT2AQ6P582 158 aa7.29□□□□□ -1.24
NXF1-205ENST00000527497 LILRA6Q6PI73 481 aa7.29□□□□□ -1.24
NXF1-205ENST00000527497 LDHAL6AQ6ZMR3 332 aa7.29□□□□□ -1.24
NXF1-205ENST00000527497 FAM156AQ8NDB6 213 aa7.29□□□□□ -1.24
NXF1-205ENST00000527497 NPLOC4Q8TAT6 608 aa7.29□□□□□ -1.24
NXF1-205ENST00000527497 XAGE3Q8WTP9 111 aa7.29□□□□□ -1.24
NXF1-205ENST00000527497 NUDT8Q8WV74 236 aa7.29□□□□□ -1.24
NXF1-205ENST00000527497 SNRNP27Q8WVK2 155 aaKnown RBP7.29□□□□□ -1.24
NXF1-205ENST00000527497 COPS5Q92905 334 aa7.29□□□□□ -1.24
NXF1-205ENST00000527497 RNF166Q96A37 237 aaPredicted RBP7.29□□□□□ -1.24
NXF1-205ENST00000527497 MAP3K14Q99558 947 aa7.29□□□□□ -1.24
NXF1-205ENST00000527497 TOPORSQ9NS56 1045 aaPredicted RBP7.29□□□□□ -1.24
NXF1-205ENST00000527497 CCM2LQ9NUG4 571 aaPredicted RBP7.29□□□□□ -1.24
NXF1-205ENST00000527497 SAGE1Q9NXZ1 904 aa7.29□□□□□ -1.24
NXF1-205ENST00000527497 FNIP2Q9P278 1114 aa7.29□□□□□ -1.24
NXF1-205ENST00000527497 LRCH1Q9Y2L9 728 aa7.29□□□□□ -1.24
Retrieved 100 of 20,778 RNA–protein pairs in 63.5 ms