RNA–Protein interactions for RNA: ENST00000527467.5

CTNND1-216, Transcript of catenin delta 1, humanhuman

TSL 1 (best) BASIC

Gene CTNND1, Length 5,071 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTNND1-216ENST00000527467 PSMB7Q99436 277 aa7.86□□□□□ -1.15
CTNND1-216ENST00000527467 CCDC8Q9H0W5 538 aaPredicted RBP7.86□□□□□ -1.15
CTNND1-216ENST00000527467 VPS16Q9H269 839 aa7.86□□□□□ -1.15
CTNND1-216ENST00000527467 TTLL3Q9Y4R7 772 aa7.86□□□□□ -1.15
CTNND1-216ENST00000527467 SPDYE16A6NNV3 312 aaPredicted RBP7.86□□□□□ -1.15
CTNND1-216ENST00000527467 H0Y626 953 aa7.86□□□□□ -1.15
CTNND1-216ENST00000527467 C21orf2O43822 256 aa7.86□□□□□ -1.15
CTNND1-216ENST00000527467 ADCY3O60266 1144 aa7.86□□□□□ -1.15
CTNND1-216ENST00000527467 C1QTNF8P60827 252 aa7.86□□□□□ -1.15
CTNND1-216ENST00000527467 SPDYE2Q495Y8 402 aa7.86□□□□□ -1.15
CTNND1-216ENST00000527467 ATL3Q6DD88 541 aa7.86□□□□□ -1.15
CTNND1-216ENST00000527467 LRRC8BQ6P9F7 803 aa7.86□□□□□ -1.15
CTNND1-216ENST00000527467 EP400NLQ6ZTU2 488 aa7.86□□□□□ -1.15
CTNND1-216ENST00000527467 BRAPQ7Z569 592 aa7.86□□□□□ -1.15
CTNND1-216ENST00000527467 LUZP2Q86TE4 346 aa7.86□□□□□ -1.15
CTNND1-216ENST00000527467 RRAGDQ9NQL2 400 aaPredicted RBP7.86□□□□□ -1.15
CTNND1-216ENST00000527467 STOML1Q9UBI4 398 aa7.86□□□□□ -1.15
CTNND1-216ENST00000527467 RASGRF2O14827 1237 aa7.86□□□□□ -1.15
CTNND1-216ENST00000527467 IFNB1P01574 187 aa7.86□□□□□ -1.15
CTNND1-216ENST00000527467 CALM1P0DP23 149 aa7.86□□□□□ -1.15
CTNND1-216ENST00000527467 CALM2P0DP24 149 aa7.86□□□□□ -1.15
CTNND1-216ENST00000527467 CALM3P0DP25 149 aa7.86□□□□□ -1.15
CTNND1-216ENST00000527467 RPS12P25398 132 aaKnown RBP7.86□□□□□ -1.15
CTNND1-216ENST00000527467 HDAC1Q13547 482 aaPredicted RBP7.86□□□□□ -1.15
CTNND1-216ENST00000527467 PRKG1Q13976 671 aa7.86□□□□□ -1.15
CTNND1-216ENST00000527467 DTHD1Q6ZMT9 781 aa7.86□□□□□ -1.15
CTNND1-216ENST00000527467 TRIM58Q8NG06 486 aa7.86□□□□□ -1.15
CTNND1-216ENST00000527467 EYA1Q99502 592 aa7.86□□□□□ -1.15
CTNND1-216ENST00000527467 TRAIPQ9BWF2 469 aa7.86□□□□□ -1.15
CTNND1-216ENST00000527467 CNNM2Q9H8M5 875 aa7.86□□□□□ -1.15
CTNND1-216ENST00000527467 ZFYVE28Q9HCC9 887 aa7.86□□□□□ -1.15
CTNND1-216ENST00000527467 LAMC1P11047 1609 aa7.86□□□□□ -1.15
CTNND1-216ENST00000527467 MAGEA9P43362 315 aa7.86□□□□□ -1.15
CTNND1-216ENST00000527467 DEFA1P59665 94 aa7.86□□□□□ -1.15
CTNND1-216ENST00000527467 DEFA3P59666 94 aa7.86□□□□□ -1.15
CTNND1-216ENST00000527467 CUL3Q13618 768 aa7.86□□□□□ -1.15
CTNND1-216ENST00000527467 HIF1AQ16665 826 aa7.86□□□□□ -1.15
CTNND1-216ENST00000527467 TJAP1Q5JTD0 557 aa7.86□□□□□ -1.15
CTNND1-216ENST00000527467 SV2BQ7L1I2 683 aa7.86□□□□□ -1.15
CTNND1-216ENST00000527467 FCHSD1Q86WN1 690 aa7.86□□□□□ -1.15
CTNND1-216ENST00000527467 SYNE4Q8N205 404 aa7.86□□□□□ -1.15
CTNND1-216ENST00000527467 COA7Q96BR5 231 aa7.86□□□□□ -1.15
CTNND1-216ENST00000527467 HYOU1Q9Y4L1 999 aa7.86□□□□□ -1.15
CTNND1-216ENST00000527467 TMEM88BA6NKF7 163 aa7.85□□□□□ -1.15
CTNND1-216ENST00000527467 TNNC2P02585 160 aa7.85□□□□□ -1.15
CTNND1-216ENST00000527467 ESRRAP11474 423 aaPredicted RBP7.85□□□□□ -1.15
CTNND1-216ENST00000527467 HSPA6P17066 643 aa7.85□□□□□ -1.15
CTNND1-216ENST00000527467 HAND2P61296 217 aa7.85□□□□□ -1.15
CTNND1-216ENST00000527467 FANCCQ00597 558 aa7.85□□□□□ -1.15
CTNND1-216ENST00000527467 IQCB1Q15051 598 aa7.85□□□□□ -1.15
CTNND1-216ENST00000527467 BEND3Q5T5X7 828 aa7.85□□□□□ -1.15
CTNND1-216ENST00000527467 ARHGEF18Q6ZSZ5 1173 aa7.85□□□□□ -1.15
CTNND1-216ENST00000527467 RNF217Q8TC41 542 aa7.85□□□□□ -1.15
CTNND1-216ENST00000527467 ASCC2Q9H1I8 757 aaPredicted RBP7.85□□□□□ -1.15
CTNND1-216ENST00000527467 COG4Q9H9E3 785 aa7.85□□□□□ -1.15
CTNND1-216ENST00000527467 STX8Q9UNK0 236 aa7.85□□□□□ -1.15
CTNND1-216ENST00000527467 CTNND2Q9UQB3 1225 aa7.85□□□□□ -1.15
CTNND1-216ENST00000527467 BZW2Q9Y6E2 419 aaKnown RBP7.85□□□□□ -1.15
CTNND1-216ENST00000527467 POLR1AO95602 1720 aaPredicted RBP7.85□□□□□ -1.15
CTNND1-216ENST00000527467 KRIT1O00522 736 aa7.85□□□□□ -1.15
CTNND1-216ENST00000527467 MMEP08473 750 aa7.85□□□□□ -1.15
CTNND1-216ENST00000527467 OCM2P0CE71 109 aa7.85□□□□□ -1.15
CTNND1-216ENST00000527467 OCMP0CE72 109 aaPredicted RBP7.85□□□□□ -1.15
CTNND1-216ENST00000527467 DPEP1P16444 411 aa7.85□□□□□ -1.15
CTNND1-216ENST00000527467 IFNAR2P48551 515 aa7.85□□□□□ -1.15
CTNND1-216ENST00000527467 ZNF75DP51815 510 aa7.85□□□□□ -1.15
CTNND1-216ENST00000527467 KLHL30Q0D2K2 578 aa7.85□□□□□ -1.15
CTNND1-216ENST00000527467 APOBRQ0VD83 1088 aa7.85□□□□□ -1.15
CTNND1-216ENST00000527467 EIF4A2Q14240 407 aaKnown RBP7.85□□□□□ -1.15
CTNND1-216ENST00000527467 IFIT1BQ5T764 474 aaKnown RBP7.85□□□□□ -1.15
CTNND1-216ENST00000527467 CNNM4Q6P4Q7 775 aa7.85□□□□□ -1.15
CTNND1-216ENST00000527467 KRT26Q7Z3Y9 468 aa7.85□□□□□ -1.15
CTNND1-216ENST00000527467 PATL1Q86TB9 770 aaKnown RBP7.85□□□□□ -1.15
CTNND1-216ENST00000527467 DCLK2Q8N568 766 aa7.85□□□□□ -1.15
CTNND1-216ENST00000527467 ESR2Q92731 530 aa7.85□□□□□ -1.15
CTNND1-216ENST00000527467 THAP11Q96EK4 314 aa7.85□□□□□ -1.15
CTNND1-216ENST00000527467 PGBD1Q96JS3 809 aa7.85□□□□□ -1.15
CTNND1-216ENST00000527467 PDE11AQ9HCR9 933 aa7.85□□□□□ -1.15
CTNND1-216ENST00000527467 C6orf203Q9P0P8 240 aaPredicted RBP7.85□□□□□ -1.15
CTNND1-216ENST00000527467 IPO11Q9UI26 975 aaKnown RBP7.85□□□□□ -1.15
CTNND1-216ENST00000527467 PNMA2Q9UL42 364 aa7.85□□□□□ -1.15
CTNND1-216ENST00000527467 SPDYE3A6NKU9 549 aa7.85□□□□□ -1.15
CTNND1-216ENST00000527467 EIF3CLB5ME19 914 aaKnown RBP7.85□□□□□ -1.15
CTNND1-216ENST00000527467 CALUO43852 315 aaPredicted RBP7.85□□□□□ -1.15
CTNND1-216ENST00000527467 ORC4O43929 436 aa7.85□□□□□ -1.15
CTNND1-216ENST00000527467 HUNKP57058 714 aa7.85□□□□□ -1.15
CTNND1-216ENST00000527467 PLS1Q14651 629 aa7.85□□□□□ -1.15
CTNND1-216ENST00000527467 SLC9A5Q14940 896 aa7.85□□□□□ -1.15
CTNND1-216ENST00000527467 MCUQ8NE86 351 aa7.85□□□□□ -1.15
CTNND1-216ENST00000527467 SNX29Q8TEQ0 813 aa7.85□□□□□ -1.15
CTNND1-216ENST00000527467 CYTH2Q99418 400 aa7.85□□□□□ -1.15
CTNND1-216ENST00000527467 CCDC90BQ9GZT6 254 aa7.85□□□□□ -1.15
CTNND1-216ENST00000527467 VPS33BQ9H267 617 aa7.85□□□□□ -1.15
CTNND1-216ENST00000527467 ITM2BQ9Y287 266 aa7.85□□□□□ -1.15
CTNND1-216ENST00000527467 IRS4O14654 1257 aaPredicted RBP7.85□□□□□ -1.15
CTNND1-216ENST00000527467 INHBAP08476 426 aa7.85□□□□□ -1.15
CTNND1-216ENST00000527467 ZNF790Q6PG37 636 aa7.85□□□□□ -1.15
CTNND1-216ENST00000527467 GSDMAQ96QA5 445 aa7.85□□□□□ -1.15
CTNND1-216ENST00000527467 RIOK1Q9BRS2 568 aaKnown RBP7.85□□□□□ -1.15
CTNND1-216ENST00000527467 RAD21L1Q9H4I0 556 aa7.85□□□□□ -1.15
Retrieved 100 of 20,778 RNA–protein pairs in 33.2 ms