RNA–Protein interactions for RNA: ENST00000527064.1

NXF1-204, Transcript of nuclear RNA export factor 1, humanhuman

TSL 2

Gene NXF1, Length 572 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NXF1-204ENST00000527064 SLC39A5Q6ZMH5 540 aa16.54■□□□□ 0.24
NXF1-204ENST00000527064 VSIG10LQ86VR7 867 aa16.54■□□□□ 0.24
NXF1-204ENST00000527064 OR6J1Q8NGC5 347 aa16.54■□□□□ 0.24
NXF1-204ENST00000527064 FERMT2Q96AC1 680 aa16.54■□□□□ 0.24
NXF1-204ENST00000527064 UPF2Q9HAU5 1272 aaKnown RBP16.54■□□□□ 0.24
NXF1-204ENST00000527064 NCOA5Q9HCD5 579 aaKnown RBP16.54■□□□□ 0.24
NXF1-204ENST00000527064 RIC8AQ9NPQ8 531 aa16.54■□□□□ 0.24
NXF1-204ENST00000527064 STARD7Q9NQZ5 370 aa16.54■□□□□ 0.24
NXF1-204ENST00000527064 MRVI1Q9Y6F6 885 aa16.54■□□□□ 0.24
NXF1-204ENST00000527064 PDE4DIPQ5VU43 2346 aa16.54■□□□□ 0.24
NXF1-204ENST00000527064 ALPK3Q96L96 1907 aa16.53■□□□□ 0.24
NXF1-204ENST00000527064 ELP1O95163 1332 aa16.53■□□□□ 0.24
NXF1-204ENST00000527064 CTAGE5O15320 804 aa16.53■□□□□ 0.24
NXF1-204ENST00000527064 CABYRO75952 493 aa16.53■□□□□ 0.24
NXF1-204ENST00000527064 CDKL5O76039 1030 aa16.53■□□□□ 0.24
NXF1-204ENST00000527064 RTP1P59025 263 aa16.53■□□□□ 0.24
NXF1-204ENST00000527064 NTRK3Q16288 839 aa16.53■□□□□ 0.24
NXF1-204ENST00000527064 IL31RAQ8NI17 732 aa16.53■□□□□ 0.24
NXF1-204ENST00000527064 PHKBQ93100 1093 aa16.53■□□□□ 0.24
NXF1-204ENST00000527064 SLC26A6Q9BXS9 759 aa16.53■□□□□ 0.24
NXF1-204ENST00000527064 SMCO2A6NFE2 343 aa16.52■□□□□ 0.24
NXF1-204ENST00000527064 H0YGN5 161 aa16.52■□□□□ 0.24
NXF1-204ENST00000527064 GH1P01241 217 aa16.52■□□□□ 0.24
NXF1-204ENST00000527064 NEK4P51957 841 aa16.52■□□□□ 0.24
NXF1-204ENST00000527064 BEX3Q00994 111 aa16.52■□□□□ 0.24
NXF1-204ENST00000527064 SSRP1Q08945 709 aaKnown RBP16.52■□□□□ 0.24
NXF1-204ENST00000527064 STK3Q13188 491 aa16.52■□□□□ 0.24
NXF1-204ENST00000527064 UBE2SQ16763 222 aa16.52■□□□□ 0.24
NXF1-204ENST00000527064 PCNX4Q63HM2 1172 aa16.52■□□□□ 0.24
NXF1-204ENST00000527064 CCDC62Q6P9F0 684 aa16.52■□□□□ 0.24
NXF1-204ENST00000527064 CCDC148Q8NFR7 591 aa16.52■□□□□ 0.24
NXF1-204ENST00000527064 SLKQ9H2G2 1235 aaPredicted RBP16.52■□□□□ 0.24
NXF1-204ENST00000527064 POLR3EQ9NVU0 708 aa16.52■□□□□ 0.24
NXF1-204ENST00000527064 ATP11BQ9Y2G3 1177 aa16.52■□□□□ 0.24
NXF1-204ENST00000527064 MROH7Q68CQ1 1323 aa16.51■□□□□ 0.23
NXF1-204ENST00000527064 KIAA1217Q5T5P2 1943 aa16.51■□□□□ 0.23
NXF1-204ENST00000527064 A0A0U1RQG5 324 aaPredicted RBP16.51■□□□□ 0.23
NXF1-204ENST00000527064 ESYT2A0FGR8 921 aa16.51■□□□□ 0.23
NXF1-204ENST00000527064 ARIH2O95376 493 aa16.51■□□□□ 0.23
NXF1-204ENST00000527064 FOSP01100 380 aaPredicted RBP16.51■□□□□ 0.23
NXF1-204ENST00000527064 TGFB3P10600 412 aa16.51■□□□□ 0.23
NXF1-204ENST00000527064 AK2P54819 239 aa16.51■□□□□ 0.23
NXF1-204ENST00000527064 AP3B2Q13367 1082 aa16.51■□□□□ 0.23
NXF1-204ENST00000527064 LY6KQ17RY6 165 aa16.51■□□□□ 0.23
NXF1-204ENST00000527064 TMEM63BQ5T3F8 832 aa16.51■□□□□ 0.23
NXF1-204ENST00000527064 TYW1BQ6NUM6 668 aa16.51■□□□□ 0.23
NXF1-204ENST00000527064 VTI1AQ96AJ9 217 aa16.51■□□□□ 0.23
NXF1-204ENST00000527064 LARP6Q9BRS8 491 aaKnown RBP16.51■□□□□ 0.23
NXF1-204ENST00000527064 SEZ6LQ9BYH1 1024 aa16.51■□□□□ 0.23
NXF1-204ENST00000527064 C22orf23Q9BZE7 217 aa16.51■□□□□ 0.23
NXF1-204ENST00000527064 C6orf50Q9HD87 102 aa16.51■□□□□ 0.23
NXF1-204ENST00000527064 DDX41Q9UJV9 622 aaKnown RBP16.51■□□□□ 0.23
NXF1-204ENST00000527064 TPCN1Q9ULQ1 816 aa16.51■□□□□ 0.23
NXF1-204ENST00000527064 KPNA6O60684 536 aa16.5■□□□□ 0.23
NXF1-204ENST00000527064 PFKFB2O60825 505 aa16.5■□□□□ 0.23
NXF1-204ENST00000527064 DEXIO95424 95 aa16.5■□□□□ 0.23
NXF1-204ENST00000527064 GNA11P29992 359 aa16.5■□□□□ 0.23
NXF1-204ENST00000527064 IRX5P78411 483 aaPredicted RBP16.5■□□□□ 0.23
NXF1-204ENST00000527064 PKN1Q16512 942 aa16.5■□□□□ 0.23
NXF1-204ENST00000527064 TRIM60Q495X7 471 aa16.5■□□□□ 0.23
NXF1-204ENST00000527064 MCTP2Q6DN12 878 aa16.5■□□□□ 0.23
NXF1-204ENST00000527064 BICD2Q8TD16 824 aa16.5■□□□□ 0.23
NXF1-204ENST00000527064 EMID1Q96A84 441 aaPredicted RBP16.5■□□□□ 0.23
NXF1-204ENST00000527064 INPP4AQ96PE3 977 aaPredicted RBP16.5■□□□□ 0.23
NXF1-204ENST00000527064 SH3GLB2Q9NR46 395 aa16.5■□□□□ 0.23
NXF1-204ENST00000527064 PRKAG2Q9UGJ0 569 aa16.5■□□□□ 0.23
NXF1-204ENST00000527064 PCDHA6Q9UN73 950 aa16.5■□□□□ 0.23
NXF1-204ENST00000527064 PCDHA8Q9Y5H6 950 aa16.5■□□□□ 0.23
NXF1-204ENST00000527064 A6NJR5 290 aa16.49■□□□□ 0.23
NXF1-204ENST00000527064 RGS20O76081 388 aa16.49■□□□□ 0.23
NXF1-204ENST00000527064 PTGS1P23219 599 aa16.49■□□□□ 0.23
NXF1-204ENST00000527064 MRPS9P82933 396 aaKnown RBP16.49■□□□□ 0.23
NXF1-204ENST00000527064 ARHGAP1Q07960 439 aa16.49■□□□□ 0.23
NXF1-204ENST00000527064 SCRN1Q12765 414 aa16.49■□□□□ 0.23
NXF1-204ENST00000527064 LAMC2Q13753 1193 aa16.49■□□□□ 0.23
NXF1-204ENST00000527064 CXCL17Q6UXB2 119 aa16.49■□□□□ 0.23
NXF1-204ENST00000527064 NLRX1Q86UT6 975 aa16.49■□□□□ 0.23
NXF1-204ENST00000527064 FAM177A1Q8N128 213 aaPredicted RBP16.49■□□□□ 0.23
NXF1-204ENST00000527064 COPS5Q92905 334 aa16.49■□□□□ 0.23
NXF1-204ENST00000527064 CDHR1Q96JP9 859 aa16.49■□□□□ 0.23
NXF1-204ENST00000527064 ZMYND12Q9H0C1 365 aa16.49■□□□□ 0.23
NXF1-204ENST00000527064 FIBPO43427 364 aa16.48■□□□□ 0.23
NXF1-204ENST00000527064 MYL3P08590 195 aa16.48■□□□□ 0.23
NXF1-204ENST00000527064 ICAM3P32942 547 aa16.48■□□□□ 0.23
NXF1-204ENST00000527064 RBM25P49756 843 aaKnown RBP16.48■□□□□ 0.23
NXF1-204ENST00000527064 ANKRD33Q7Z3H0 272 aa16.48■□□□□ 0.23
NXF1-204ENST00000527064 DHX37Q8IY37 1157 aaKnown RBP16.48■□□□□ 0.23
NXF1-204ENST00000527064 REXO1Q8N1G1 1221 aaKnown RBP16.48■□□□□ 0.23
NXF1-204ENST00000527064 PPTC7Q8NI37 304 aa16.48■□□□□ 0.23
NXF1-204ENST00000527064 TOX2Q96NM4 488 aa16.48■□□□□ 0.23
NXF1-204ENST00000527064 MTG1Q9BT17 334 aaPredicted RBP16.48■□□□□ 0.23
NXF1-204ENST00000527064 ANO3Q9BYT9 981 aa16.48■□□□□ 0.23
NXF1-204ENST00000527064 ZMYND8Q9ULU4 1186 aaPredicted RBP16.48■□□□□ 0.23
NXF1-204ENST00000527064 GTF3C3Q9Y5Q9 886 aa16.48■□□□□ 0.23
NXF1-204ENST00000527064 STK36Q9NRP7 1315 aa16.47■□□□□ 0.23
NXF1-204ENST00000527064 DNAH12Q6ZR08 3092 aa16.47■□□□□ 0.23
NXF1-204ENST00000527064 DCDC2CA8MYV0 355 aa16.47■□□□□ 0.23
NXF1-204ENST00000527064 ARVCFO00192 962 aa16.47■□□□□ 0.23
NXF1-204ENST00000527064 PQBP1O60828 265 aaKnown RBP16.47■□□□□ 0.23
NXF1-204ENST00000527064 PPFIA3O75145 1194 aa16.47■□□□□ 0.23
Retrieved 100 of 20,778 RNA–protein pairs in 44.3 ms