RNA–Protein interactions for RNA: ENST00000527013.5

CHEK1-209, Transcript of checkpoint kinase 1, humanhuman

TSL 3

Gene CHEK1, Length 661 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHEK1-209ENST00000527013 RMDN3Q96TC7 470 aa18.81■□□□□ 0.6
CHEK1-209ENST00000527013 ZSWIM5Q9P217 1185 aa18.81■□□□□ 0.6
CHEK1-209ENST00000527013 MRPL11Q9Y3B7 192 aaKnown RBP18.81■□□□□ 0.6
CHEK1-209ENST00000527013 NCOR1O75376 2440 aa18.81■□□□□ 0.6
CHEK1-209ENST00000527013 TRIP12Q14669 1992 aaPredicted RBP18.81■□□□□ 0.6
CHEK1-209ENST00000527013 EPOPA6NHQ4 379 aa18.8■□□□□ 0.6
CHEK1-209ENST00000527013 RFXAPO00287 272 aa18.8■□□□□ 0.6
CHEK1-209ENST00000527013 GTPBP6O43824 516 aaPredicted RBP18.8■□□□□ 0.6
CHEK1-209ENST00000527013 EIF3JO75822 258 aaKnown RBP18.8■□□□□ 0.6
CHEK1-209ENST00000527013 COL9A1P20849 921 aa18.8■□□□□ 0.6
CHEK1-209ENST00000527013 GDF6Q6KF10 455 aaPredicted RBP18.8■□□□□ 0.6
CHEK1-209ENST00000527013 SEPT14Q6ZU15 432 aa18.8■□□□□ 0.6
CHEK1-209ENST00000527013 DSCC1Q9BVC3 393 aa18.8■□□□□ 0.6
CHEK1-209ENST00000527013 JMJD4Q9H9V9 463 aa18.8■□□□□ 0.6
CHEK1-209ENST00000527013 GTF2IRD1Q9UHL9 959 aa18.8■□□□□ 0.6
CHEK1-209ENST00000527013 DDX41Q9UJV9 622 aaKnown RBP18.8■□□□□ 0.6
CHEK1-209ENST00000527013 PRRC2BQ5JSZ5 2229 aaKnown RBP18.8■□□□□ 0.6
CHEK1-209ENST00000527013 MYH6P13533 1939 aa18.79■□□□□ 0.6
CHEK1-209ENST00000527013 PTPRSQ13332 1948 aa18.79■□□□□ 0.6
CHEK1-209ENST00000527013 B4E1Z4 1266 aa18.79■□□□□ 0.6
CHEK1-209ENST00000527013 ARHGEF15O94989 841 aa18.79■□□□□ 0.6
CHEK1-209ENST00000527013 CXCL10P02778 98 aa18.79■□□□□ 0.6
CHEK1-209ENST00000527013 SELPP16109 830 aa18.79■□□□□ 0.6
CHEK1-209ENST00000527013 DGKDQ16760 1214 aa18.79■□□□□ 0.6
CHEK1-209ENST00000527013 CWC27Q6UX04 472 aaKnown RBP18.79■□□□□ 0.6
CHEK1-209ENST00000527013 CHD1LQ86WJ1 897 aa18.79■□□□□ 0.6
CHEK1-209ENST00000527013 FBXO11Q86XK2 927 aa18.79■□□□□ 0.6
CHEK1-209ENST00000527013 MICALL1Q8N3F8 863 aa18.79■□□□□ 0.6
CHEK1-209ENST00000527013 DHX38Q92620 1227 aaKnown RBP18.79■□□□□ 0.6
CHEK1-209ENST00000527013 RWDD1Q9H446 243 aaPredicted RBP18.79■□□□□ 0.6
CHEK1-209ENST00000527013 MAP3K20Q9NYL2 800 aaKnown RBP18.79■□□□□ 0.6
CHEK1-209ENST00000527013 HAS3O00219 553 aa18.78■□□□□ 0.6
CHEK1-209ENST00000527013 HIP1O00291 1037 aa18.78■□□□□ 0.6
CHEK1-209ENST00000527013 PARP1P09874 1014 aaKnown RBP18.78■□□□□ 0.6
CHEK1-209ENST00000527013 HOXD8P13378 290 aaPredicted RBP18.78■□□□□ 0.6
CHEK1-209ENST00000527013 HSD17B4P51659 736 aa18.78■□□□□ 0.6
CHEK1-209ENST00000527013 WDR5P61964 334 aaKnown RBP18.78■□□□□ 0.6
CHEK1-209ENST00000527013 TFF2Q03403 129 aa18.78■□□□□ 0.6
CHEK1-209ENST00000527013 LRRC8DQ7L1W4 858 aa18.78■□□□□ 0.6
CHEK1-209ENST00000527013 PPTC7Q8NI37 304 aa18.78■□□□□ 0.6
CHEK1-209ENST00000527013 CERS4Q9HA82 394 aa18.78■□□□□ 0.6
CHEK1-209ENST00000527013 PXMP2Q9NR77 195 aa18.78■□□□□ 0.6
CHEK1-209ENST00000527013 DIAPH3Q9NSV4 1193 aa18.78■□□□□ 0.6
CHEK1-209ENST00000527013 COG5Q9UP83 839 aa18.78■□□□□ 0.6
CHEK1-209ENST00000527013 OPLAHO14841 1288 aa18.77■□□□□ 0.6
CHEK1-209ENST00000527013 TLL1O43897 1013 aa18.77■□□□□ 0.6
CHEK1-209ENST00000527013 F2P00734 622 aa18.77■□□□□ 0.6
CHEK1-209ENST00000527013 NR3C2P08235 984 aa18.77■□□□□ 0.6
CHEK1-209ENST00000527013 CKBP12277 381 aa18.77■□□□□ 0.6
CHEK1-209ENST00000527013 KCNJ6P48051 423 aa18.77■□□□□ 0.6
CHEK1-209ENST00000527013 NUCB1Q02818 461 aa18.77■□□□□ 0.6
CHEK1-209ENST00000527013 LAMC2Q13753 1193 aa18.77■□□□□ 0.6
CHEK1-209ENST00000527013 IMMTQ16891 758 aaKnown RBP18.77■□□□□ 0.6
CHEK1-209ENST00000527013 ARHGEF16Q5VV41 709 aa18.77■□□□□ 0.6
CHEK1-209ENST00000527013 CNKSR3Q6P9H4 555 aa18.77■□□□□ 0.6
CHEK1-209ENST00000527013 SAMD3Q8N6K7 520 aa18.77■□□□□ 0.6
CHEK1-209ENST00000527013 ARNTL2Q8WYA1 636 aa18.77■□□□□ 0.6
CHEK1-209ENST00000527013 MTMR8Q96EF0 704 aa18.77■□□□□ 0.6
CHEK1-209ENST00000527013 KATNAL1Q9BW62 490 aa18.77■□□□□ 0.6
CHEK1-209ENST00000527013 AMNQ9BXJ7 453 aa18.77■□□□□ 0.6
CHEK1-209ENST00000527013 KRT23Q9C075 422 aa18.77■□□□□ 0.6
CHEK1-209ENST00000527013 CNNM2Q9H8M5 875 aa18.77■□□□□ 0.6
CHEK1-209ENST00000527013 CTNNA3Q9UI47 895 aa18.77■□□□□ 0.6
CHEK1-209ENST00000527013 BDP1A6H8Y1 2624 aa18.77■□□□□ 0.6
CHEK1-209ENST00000527013 ABHD14A-ACY1A0A1B0GW23 586 aa18.76■□□□□ 0.59
CHEK1-209ENST00000527013 LPXNO60711 386 aa18.76■□□□□ 0.59
CHEK1-209ENST00000527013 NBNO60934 754 aa18.76■□□□□ 0.59
CHEK1-209ENST00000527013 EIF2AK2P19525 551 aaKnown RBP18.76■□□□□ 0.59
CHEK1-209ENST00000527013 KCNQ1P51787 676 aa18.76■□□□□ 0.59
CHEK1-209ENST00000527013 CHMP4BP1P59074 171 aa18.76■□□□□ 0.59
CHEK1-209ENST00000527013 PTK7Q13308 1070 aa18.76■□□□□ 0.59
CHEK1-209ENST00000527013 STOX1Q6ZVD7 989 aa18.76■□□□□ 0.59
CHEK1-209ENST00000527013 CHST3Q7LGC8 479 aa18.76■□□□□ 0.59
CHEK1-209ENST00000527013 C7orf31Q8N865 590 aa18.76■□□□□ 0.59
CHEK1-209ENST00000527013 LMCD1Q9NZU5 365 aa18.76■□□□□ 0.59
CHEK1-209ENST00000527013 HDAC6Q9UBN7 1215 aa18.76■□□□□ 0.59
CHEK1-209ENST00000527013 TCF20Q9UGU0 1960 aaKnown RBP18.75■□□□□ 0.59
CHEK1-209ENST00000527013 DHX16O60231 1041 aaKnown RBP18.75■□□□□ 0.59
CHEK1-209ENST00000527013 EFCAB14O75071 495 aa18.75■□□□□ 0.59
CHEK1-209ENST00000527013 RGS20O76081 388 aa18.75■□□□□ 0.59
CHEK1-209ENST00000527013 CFBP00751 764 aa18.75■□□□□ 0.59
CHEK1-209ENST00000527013 PSEN2P49810 448 aa18.75■□□□□ 0.59
CHEK1-209ENST00000527013 GRB10Q13322 594 aa18.75■□□□□ 0.59
CHEK1-209ENST00000527013 SKIV2LQ15477 1246 aaKnown RBP18.75■□□□□ 0.59
CHEK1-209ENST00000527013 TRIM71Q2Q1W2 868 aaKnown RBP18.75■□□□□ 0.59
CHEK1-209ENST00000527013 B4GALNT3Q6L9W6 998 aa18.75■□□□□ 0.59
CHEK1-209ENST00000527013 KCNV1Q6PIU1 500 aa18.75■□□□□ 0.59
CHEK1-209ENST00000527013 TRAF7Q6Q0C0 670 aa18.75■□□□□ 0.59
CHEK1-209ENST00000527013 PDCD2LQ9BRP1 358 aa18.75■□□□□ 0.59
CHEK1-209ENST00000527013 UBAC1Q9BSL1 405 aa18.75■□□□□ 0.59
CHEK1-209ENST00000527013 VAT1LQ9HCJ6 419 aa18.75■□□□□ 0.59
CHEK1-209ENST00000527013 MRVI1Q9Y6F6 885 aa18.75■□□□□ 0.59
CHEK1-209ENST00000527013 PPFIA4O75335 1185 aa18.74■□□□□ 0.59
CHEK1-209ENST00000527013 IGHDP01880 384 aa18.74■□□□□ 0.59
CHEK1-209ENST00000527013 MFSD10Q14728 455 aa18.74■□□□□ 0.59
CHEK1-209ENST00000527013 SEC23AQ15436 765 aa18.74■□□□□ 0.59
CHEK1-209ENST00000527013 KIAA0753Q2KHM9 967 aa18.74■□□□□ 0.59
CHEK1-209ENST00000527013 MYSM1Q5VVJ2 828 aa18.74■□□□□ 0.59
CHEK1-209ENST00000527013 KRT40Q6A162 431 aa18.74■□□□□ 0.59
CHEK1-209ENST00000527013 DHX37Q8IY37 1157 aaKnown RBP18.74■□□□□ 0.59
Retrieved 100 of 20,778 RNA–protein pairs in 33 ms