RNA–Protein interactions for RNA: ENST00000526653.1

SF3B2-205, Transcript of splicing factor 3b subunit 2, humanhuman

TSL 2

Gene SF3B2, Length 329 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SF3B2-205ENST00000526653 PPP1R9AQ9ULJ8 1098 aa6.98□□□□□ -1.29
SF3B2-205ENST00000526653 ZMYND8Q9ULU4 1186 aaPredicted RBP6.98□□□□□ -1.29
SF3B2-205ENST00000526653 NUDCQ9Y266 331 aa6.98□□□□□ -1.29
SF3B2-205ENST00000526653 RIPOR2Q9Y4F9 1068 aa6.98□□□□□ -1.29
SF3B2-205ENST00000526653 PCDHAC2Q9Y5I4 1007 aa6.98□□□□□ -1.29
SF3B2-205ENST00000526653 ZNF609O15014 1411 aa6.98□□□□□ -1.29
SF3B2-205ENST00000526653 TMEM238LA0A1B0GVL6 79 aa6.97□□□□□ -1.29
SF3B2-205ENST00000526653 CLRN2A0PK11 232 aa6.97□□□□□ -1.29
SF3B2-205ENST00000526653 DYNC1LI2O43237 492 aaPredicted RBP6.97□□□□□ -1.29
SF3B2-205ENST00000526653 TLR2O60603 784 aa6.97□□□□□ -1.29
SF3B2-205ENST00000526653 GADD45BO75293 160 aaPredicted RBP6.97□□□□□ -1.29
SF3B2-205ENST00000526653 WDHD1O75717 1129 aaPredicted RBP6.97□□□□□ -1.29
SF3B2-205ENST00000526653 SGPL1O95470 568 aa6.97□□□□□ -1.29
SF3B2-205ENST00000526653 SYN1P17600 705 aa6.97□□□□□ -1.29
SF3B2-205ENST00000526653 BMP8BP34820 402 aa6.97□□□□□ -1.29
SF3B2-205ENST00000526653 PSMC4P43686 418 aa6.97□□□□□ -1.29
SF3B2-205ENST00000526653 STRIP1Q5VSL9 837 aa6.97□□□□□ -1.29
SF3B2-205ENST00000526653 TP53INP2Q8IXH6 220 aa6.97□□□□□ -1.29
SF3B2-205ENST00000526653 PAWRQ96IZ0 340 aaKnown RBP6.97□□□□□ -1.29
SF3B2-205ENST00000526653 FBXL18Q96ME1 805 aa6.97□□□□□ -1.29
SF3B2-205ENST00000526653 LRRC4CQ9HCJ2 640 aa6.97□□□□□ -1.29
SF3B2-205ENST00000526653 C1GALT1Q9NS00 363 aa6.97□□□□□ -1.29
SF3B2-205ENST00000526653 DAGLAQ9Y4D2 1042 aa6.97□□□□□ -1.29
SF3B2-205ENST00000526653 DUOX1Q9NRD9 1551 aa6.96□□□□□ -1.29
SF3B2-205ENST00000526653 UNCXA6NJT0 531 aa6.96□□□□□ -1.3
SF3B2-205ENST00000526653 HOXD10P28358 340 aa6.96□□□□□ -1.3
SF3B2-205ENST00000526653 CTGFP29279 349 aa6.96□□□□□ -1.3
SF3B2-205ENST00000526653 GTF2A2P52657 109 aa6.96□□□□□ -1.3
SF3B2-205ENST00000526653 PRMT2P55345 433 aa6.96□□□□□ -1.3
SF3B2-205ENST00000526653 CYP27A1Q02318 531 aa6.96□□□□□ -1.3
SF3B2-205ENST00000526653 FAAP100Q0VG06 881 aa6.96□□□□□ -1.3
SF3B2-205ENST00000526653 LRIT3Q3SXY7 679 aa6.96□□□□□ -1.3
SF3B2-205ENST00000526653 RPS26P11Q5JNZ5 115 aaPredicted RBP6.96□□□□□ -1.3
SF3B2-205ENST00000526653 GLIS3Q8NEA6 775 aa6.96□□□□□ -1.3
SF3B2-205ENST00000526653 ZBED3Q96IU2 234 aaPredicted RBP6.96□□□□□ -1.3
SF3B2-205ENST00000526653 PRMT6Q96LA8 375 aaPredicted RBP6.96□□□□□ -1.3
SF3B2-205ENST00000526653 CFAP53Q96M91 514 aa6.96□□□□□ -1.3
SF3B2-205ENST00000526653 KRTAP9-9Q9BYP9 154 aa6.96□□□□□ -1.3
SF3B2-205ENST00000526653 KRTAP9-4Q9BYQ2 154 aa6.96□□□□□ -1.3
SF3B2-205ENST00000526653 VEZTQ9HBM0 779 aa6.96□□□□□ -1.3
SF3B2-205ENST00000526653 ZC3H7BQ9UGR2 993 aaKnown RBP6.96□□□□□ -1.3
SF3B2-205ENST00000526653 SRRDQ9UH36 339 aa6.96□□□□□ -1.3
SF3B2-205ENST00000526653 CPA4Q9UI42 421 aa6.96□□□□□ -1.3
SF3B2-205ENST00000526653 TTC28Q96AY4 2481 aa6.96□□□□□ -1.3
SF3B2-205ENST00000526653 PRUNE2Q8WUY3 3088 aa6.95□□□□□ -1.3
SF3B2-205ENST00000526653 LAMA2P24043 3122 aaKnown RBP6.95□□□□□ -1.3
SF3B2-205ENST00000526653 F8W031 263 aaPredicted RBP6.95□□□□□ -1.3
SF3B2-205ENST00000526653 LIG1P18858 919 aa6.95□□□□□ -1.3
SF3B2-205ENST00000526653 UBXN2AP68543 259 aa6.95□□□□□ -1.3
SF3B2-205ENST00000526653 GRM2Q14416 872 aa6.95□□□□□ -1.3
SF3B2-205ENST00000526653 RASA3Q14644 834 aa6.95□□□□□ -1.3
SF3B2-205ENST00000526653 COL19A1Q14993 1142 aa6.95□□□□□ -1.3
SF3B2-205ENST00000526653 CBLL1Q75N03 491 aa6.95□□□□□ -1.3
SF3B2-205ENST00000526653 ANKRD18AQ8IVF6 992 aa6.95□□□□□ -1.3
SF3B2-205ENST00000526653 C7orf61Q8IZ16 206 aa6.95□□□□□ -1.3
SF3B2-205ENST00000526653 EPS8L3Q8TE67 593 aaKnown RBP6.95□□□□□ -1.3
SF3B2-205ENST00000526653 WDR89Q96FK6 387 aaPredicted RBP6.95□□□□□ -1.3
SF3B2-205ENST00000526653 DEFB118Q96PH6 123 aa6.95□□□□□ -1.3
SF3B2-205ENST00000526653 CCDC86Q9H6F5 360 aaKnown RBP6.95□□□□□ -1.3
SF3B2-205ENST00000526653 XDHP47989 1333 aa6.95□□□□□ -1.3
SF3B2-205ENST00000526653 RPTORQ8N122 1335 aa6.95□□□□□ -1.3
SF3B2-205ENST00000526653 SYNGAP1Q96PV0 1343 aa6.95□□□□□ -1.3
SF3B2-205ENST00000526653 IRS2Q9Y4H2 1338 aa6.95□□□□□ -1.3
SF3B2-205ENST00000526653 BTBD19C9JJ37 291 aa6.94□□□□□ -1.3
SF3B2-205ENST00000526653 TMPRSS2O15393 492 aa6.94□□□□□ -1.3
SF3B2-205ENST00000526653 MAGEA10P43363 369 aaPredicted RBP6.94□□□□□ -1.3
SF3B2-205ENST00000526653 RBM5P52756 815 aaKnown RBP eCLIP6.94□□□□□ -1.3
SF3B2-205ENST00000526653 OGFOD3Q6PK18 319 aa6.94□□□□□ -1.3
SF3B2-205ENST00000526653 TDHQ8IZJ6 230 aa6.94□□□□□ -1.3
SF3B2-205ENST00000526653 RETREG2Q8NC44 543 aa6.94□□□□□ -1.3
SF3B2-205ENST00000526653 FLCNQ8NFG4 579 aa6.94□□□□□ -1.3
SF3B2-205ENST00000526653 FAM122AQ96E09 287 aa6.94□□□□□ -1.3
SF3B2-205ENST00000526653 GUCD1Q96NT3 240 aa6.94□□□□□ -1.3
SF3B2-205ENST00000526653 ARID3AQ99856 593 aa6.94□□□□□ -1.3
SF3B2-205ENST00000526653 ISCA1Q9BUE6 129 aa6.94□□□□□ -1.3
SF3B2-205ENST00000526653 COA1Q9GZY4 146 aa6.94□□□□□ -1.3
SF3B2-205ENST00000526653 TSPYL4Q9UJ04 414 aa6.94□□□□□ -1.3
SF3B2-205ENST00000526653 MINPP1Q9UNW1 487 aa6.94□□□□□ -1.3
SF3B2-205ENST00000526653 MYO3BQ8WXR4 1341 aa6.94□□□□□ -1.3
SF3B2-205ENST00000526653 NUP98P52948 1817 aa6.94□□□□□ -1.3
SF3B2-205ENST00000526653 TAF1P21675 1872 aa6.94□□□□□ -1.3
SF3B2-205ENST00000526653 SPTBN5Q9NRC6 3674 aaKnown RBP6.94□□□□□ -1.3
SF3B2-205ENST00000526653 MYO1BO43795 1136 aa6.93□□□□□ -1.3
SF3B2-205ENST00000526653 ZNF862O60290 1169 aa6.93□□□□□ -1.3
SF3B2-205ENST00000526653 NEFMP07197 916 aa6.93□□□□□ -1.3
SF3B2-205ENST00000526653 CETPP11597 493 aa6.93□□□□□ -1.3
SF3B2-205ENST00000526653 MMP14P50281 582 aa6.93□□□□□ -1.3
SF3B2-205ENST00000526653 VGLL4Q14135 290 aa6.93□□□□□ -1.3
SF3B2-205ENST00000526653 CFAP100Q494V2 611 aa6.93□□□□□ -1.3
SF3B2-205ENST00000526653 CCDC152Q4G0S7 254 aa6.93□□□□□ -1.3
SF3B2-205ENST00000526653 C17orf99Q6UX52 265 aa6.93□□□□□ -1.3
SF3B2-205ENST00000526653 NECAB2Q7Z6G3 386 aa6.93□□□□□ -1.3
SF3B2-205ENST00000526653 PLBD2Q8NHP8 589 aa6.93□□□□□ -1.3
SF3B2-205ENST00000526653 DIS3LQ8TF46 1054 aaKnown RBP6.93□□□□□ -1.3
SF3B2-205ENST00000526653 ALKBH8Q96BT7 664 aaKnown RBP6.93□□□□□ -1.3
SF3B2-205ENST00000526653 DMRTB1Q96MA1 342 aa6.93□□□□□ -1.3
SF3B2-205ENST00000526653 RBCK1Q9BYM8 510 aa6.93□□□□□ -1.3
SF3B2-205ENST00000526653 PAK6Q9NQU5 681 aaPredicted RBP6.93□□□□□ -1.3
SF3B2-205ENST00000526653 CRIM1Q9NZV1 1036 aa6.93□□□□□ -1.3
SF3B2-205ENST00000526653 GABRQQ9UN88 632 aa6.93□□□□□ -1.3
Retrieved 100 of 20,778 RNA–protein pairs in 34.1 ms