RNA–Protein interactions for RNA: ENST00000526627.1

SMIM3-201, Transcript of small integral membrane protein 3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SMIM3, Length 2,332 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMIM3-201ENST00000526627 DUSP10Q9Y6W6 482 aa22.68■■□□□ 1.22
SMIM3-201ENST00000526627 MYH4Q9Y623 1939 aa22.68■■□□□ 1.22
SMIM3-201ENST00000526627 KRT86O43790 486 aa22.68■■□□□ 1.22
SMIM3-201ENST00000526627 PLEKP08567 350 aaPredicted RBP22.68■■□□□ 1.22
SMIM3-201ENST00000526627 CYP27A1Q02318 531 aa22.68■■□□□ 1.22
SMIM3-201ENST00000526627 APOBEC3HQ6NTF7 200 aaKnown RBP22.68■■□□□ 1.22
SMIM3-201ENST00000526627 CUL5Q93034 780 aa22.68■■□□□ 1.22
SMIM3-201ENST00000526627 DNAJC19Q96DA6 116 aa22.68■■□□□ 1.22
SMIM3-201ENST00000526627 SUGCTQ9HAC7 445 aa22.68■■□□□ 1.22
SMIM3-201ENST00000526627 PLAGL2Q9UPG8 496 aa22.68■■□□□ 1.22
SMIM3-201ENST00000526627 ATF5Q9Y2D1 282 aaPredicted RBP22.68■■□□□ 1.22
SMIM3-201ENST00000526627 ABCB11O95342 1321 aa22.68■■□□□ 1.22
SMIM3-201ENST00000526627 SRGAP2O75044 1071 aa22.67■■□□□ 1.22
SMIM3-201ENST00000526627 LRRC63Q05C16 580 aa22.67■■□□□ 1.22
SMIM3-201ENST00000526627 MAN2A1Q16706 1144 aa22.67■■□□□ 1.22
SMIM3-201ENST00000526627 KCTD1Q719H9 257 aa22.67■■□□□ 1.22
SMIM3-201ENST00000526627 SAR1BQ9Y6B6 198 aa22.67■■□□□ 1.22
SMIM3-201ENST00000526627 ARFGEF1Q9Y6D6 1849 aa22.67■■□□□ 1.22
SMIM3-201ENST00000526627 ZBTB5O15062 677 aa22.66■■□□□ 1.22
SMIM3-201ENST00000526627 IDEP14735 1019 aa22.66■■□□□ 1.22
SMIM3-201ENST00000526627 DOK7Q18PE1 504 aa22.66■■□□□ 1.22
SMIM3-201ENST00000526627 GPATCH4Q5T3I0 446 aaKnown RBP22.66■■□□□ 1.22
SMIM3-201ENST00000526627 EHBP1Q8NDI1 1231 aa22.66■■□□□ 1.22
SMIM3-201ENST00000526627 IQCDQ96DY2 449 aa22.66■■□□□ 1.22
SMIM3-201ENST00000526627 MMS19Q96T76 1030 aa22.66■■□□□ 1.22
SMIM3-201ENST00000526627 ZC3H12CQ9C0D7 883 aaKnown RBP22.66■■□□□ 1.22
SMIM3-201ENST00000526627 AFF2P51816 1311 aa22.66■■□□□ 1.22
SMIM3-201ENST00000526627 NFIAQ12857 509 aa22.66■■□□□ 1.22
SMIM3-201ENST00000526627 LRRC41Q15345 812 aa22.66■■□□□ 1.22
SMIM3-201ENST00000526627 ZFPM1Q8IX07 1006 aa22.66■■□□□ 1.22
SMIM3-201ENST00000526627 ARHGAP20Q9P2F6 1191 aa22.66■■□□□ 1.22
SMIM3-201ENST00000526627 VAV2P52735 878 aa22.65■■□□□ 1.22
SMIM3-201ENST00000526627 MRPL12P52815 198 aaKnown RBP22.65■■□□□ 1.22
SMIM3-201ENST00000526627 PSMD2Q13200 908 aa22.65■■□□□ 1.22
SMIM3-201ENST00000526627 CCDC96Q2M329 555 aa22.65■■□□□ 1.22
SMIM3-201ENST00000526627 FOXR2Q6PJQ5 311 aa22.65■■□□□ 1.22
SMIM3-201ENST00000526627 KRT26Q7Z3Y9 468 aa22.65■■□□□ 1.22
SMIM3-201ENST00000526627 DNAJC18Q9H819 358 aa22.65■■□□□ 1.22
SMIM3-201ENST00000526627 ERLIN1O75477 346 aa22.65■■□□□ 1.22
SMIM3-201ENST00000526627 ZCWPW2Q504Y3 356 aa22.65■■□□□ 1.22
SMIM3-201ENST00000526627 HYIQ5T013 277 aa22.65■■□□□ 1.22
SMIM3-201ENST00000526627 HHIPL2Q6UWX4 724 aa22.65■■□□□ 1.22
SMIM3-201ENST00000526627 HDXQ7Z353 690 aa22.65■■□□□ 1.22
SMIM3-201ENST00000526627 MSL3Q8N5Y2 521 aaKnown RBP22.65■■□□□ 1.22
SMIM3-201ENST00000526627 PSTPIP2Q9H939 334 aa22.65■■□□□ 1.22
SMIM3-201ENST00000526627 FAM207AQ9NSI2 230 aaPredicted RBP22.65■■□□□ 1.22
SMIM3-201ENST00000526627 HOXA7P31268 230 aaPredicted RBP22.64■■□□□ 1.22
SMIM3-201ENST00000526627 COASYQ13057 564 aa22.64■■□□□ 1.22
SMIM3-201ENST00000526627 WDR93Q6P2C0 686 aa22.64■■□□□ 1.22
SMIM3-201ENST00000526627 LRRC27Q9C0I9 530 aa22.64■■□□□ 1.22
SMIM3-201ENST00000526627 SIPA1L1O43166 1804 aa22.64■■□□□ 1.21
SMIM3-201ENST00000526627 FGFR1OPO95684 399 aaKnown RBP22.64■■□□□ 1.21
SMIM3-201ENST00000526627 USP14P54578 494 aa22.64■■□□□ 1.21
SMIM3-201ENST00000526627 ATP2B2Q01814 1243 aa22.64■■□□□ 1.21
SMIM3-201ENST00000526627 MPHOSPH10O00566 681 aaKnown RBP22.63■■□□□ 1.21
SMIM3-201ENST00000526627 IPO7O95373 1038 aaKnown RBP22.63■■□□□ 1.21
SMIM3-201ENST00000526627 GCFC2P16383 781 aaKnown RBP22.63■■□□□ 1.21
SMIM3-201ENST00000526627 BAP1Q92560 729 aa22.63■■□□□ 1.21
SMIM3-201ENST00000526627 CCDC42Q96M95 316 aa22.63■■□□□ 1.21
SMIM3-201ENST00000526627 NRXN2Q9P2S2 1712 aa22.63■■□□□ 1.21
SMIM3-201ENST00000526627 ANO9A1A5B4 782 aa22.63■■□□□ 1.21
SMIM3-201ENST00000526627 LCA5LO95447 670 aa22.63■■□□□ 1.21
SMIM3-201ENST00000526627 TUBBP07437 444 aa22.63■■□□□ 1.21
SMIM3-201ENST00000526627 SHROOM1Q2M3G4 852 aaPredicted RBP22.63■■□□□ 1.21
SMIM3-201ENST00000526627 MEX3CQ5U5Q3 659 aaKnown RBP22.63■■□□□ 1.21
SMIM3-201ENST00000526627 C2CD5Q86YS7 1000 aa22.63■■□□□ 1.21
SMIM3-201ENST00000526627 FGFBP2Q9BYJ0 223 aa22.63■■□□□ 1.21
SMIM3-201ENST00000526627 EHD4Q9H223 541 aa22.63■■□□□ 1.21
SMIM3-201ENST00000526627 HLA-DOAP06340 250 aa22.62■■□□□ 1.21
SMIM3-201ENST00000526627 PROM2Q8N271 834 aa22.62■■□□□ 1.21
SMIM3-201ENST00000526627 TEKT1Q969V4 418 aa22.62■■□□□ 1.21
SMIM3-201ENST00000526627 MMRN2Q9H8L6 949 aa22.62■■□□□ 1.21
SMIM3-201ENST00000526627 PDE11AQ9HCR9 933 aa22.62■■□□□ 1.21
SMIM3-201ENST00000526627 PCDHA12Q9UN75 941 aa22.62■■□□□ 1.21
SMIM3-201ENST00000526627 MACROD2A1Z1Q3 448 aa22.62■■□□□ 1.21
SMIM3-201ENST00000526627 ERICH4A6NGS2 130 aa22.62■■□□□ 1.21
SMIM3-201ENST00000526627 PDE2AO00408 941 aaPredicted RBP22.62■■□□□ 1.21
SMIM3-201ENST00000526627 KIF5AQ12840 1032 aa22.62■■□□□ 1.21
SMIM3-201ENST00000526627 SEPT2Q15019 361 aa22.62■■□□□ 1.21
SMIM3-201ENST00000526627 CCDC84Q86UT8 332 aaPredicted RBP22.62■■□□□ 1.21
SMIM3-201ENST00000526627 MYOCDQ8IZQ8 938 aa22.62■■□□□ 1.21
SMIM3-201ENST00000526627 EP400Q96L91 3159 aa22.61■■□□□ 1.21
SMIM3-201ENST00000526627 USP17L15C9J2P7 530 aa22.61■■□□□ 1.21
SMIM3-201ENST00000526627 USP17L13C9JLJ4 530 aa22.61■■□□□ 1.21
SMIM3-201ENST00000526627 USP17L11C9JVI0 530 aa22.61■■□□□ 1.21
SMIM3-201ENST00000526627 USP17L18D6R9N7 530 aa22.61■■□□□ 1.21
SMIM3-201ENST00000526627 USP17L22D6RA61 530 aa22.61■■□□□ 1.21
SMIM3-201ENST00000526627 USP17L17D6RBQ6 530 aa22.61■■□□□ 1.21
SMIM3-201ENST00000526627 USP17L19D6RCP7 530 aa22.61■■□□□ 1.21
SMIM3-201ENST00000526627 USP17L20D6RJB6 530 aa22.61■■□□□ 1.21
SMIM3-201ENST00000526627 EIF4A3P38919 411 aaKnown RBP22.61■■□□□ 1.21
SMIM3-201ENST00000526627 USP17L24Q0WX57 530 aa22.61■■□□□ 1.21
SMIM3-201ENST00000526627 KCNMA1Q12791 1236 aa22.61■■□□□ 1.21
SMIM3-201ENST00000526627 QRICH1Q2TAL8 776 aa22.61■■□□□ 1.21
SMIM3-201ENST00000526627 USP17L6PQ6QN14 398 aa22.61■■□□□ 1.21
SMIM3-201ENST00000526627 CCDC155Q8N6L0 562 aa22.61■■□□□ 1.21
SMIM3-201ENST00000526627 CAPZA3Q96KX2 299 aa22.61■■□□□ 1.21
SMIM3-201ENST00000526627 TSGA10Q9BZW7 698 aa22.61■■□□□ 1.21
SMIM3-201ENST00000526627 GBP3Q9H0R5 595 aa22.61■■□□□ 1.21
SMIM3-201ENST00000526627 PANK4Q9NVE7 773 aa22.61■■□□□ 1.21
Retrieved 100 of 20,778 RNA–protein pairs in 42.9 ms