RNA–Protein interactions for RNA: ENST00000526299.5

ECHDC1-219, Transcript of ethylmalonyl-CoA decarboxylase 1, humanhuman

TSL 5

Gene ECHDC1, Length 534 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ECHDC1-219ENST00000526299 CCDC27Q2M243 656 aa5.01□□□□□ -1.61
ECHDC1-219ENST00000526299 PRAMEF18Q5VWM3 479 aa5.01□□□□□ -1.61
ECHDC1-219ENST00000526299 PLEKHH3Q7Z736 793 aa5.01□□□□□ -1.61
ECHDC1-219ENST00000526299 ZC3H18Q86VM9 953 aaKnown RBP5.01□□□□□ -1.61
ECHDC1-219ENST00000526299 CIR1Q86X95 450 aaPredicted RBP5.01□□□□□ -1.61
ECHDC1-219ENST00000526299 TEX2Q8IWB9 1127 aa5.01□□□□□ -1.61
ECHDC1-219ENST00000526299 IGDCC4Q8TDY8 1250 aa5.01□□□□□ -1.61
ECHDC1-219ENST00000526299 GIPC2Q8TF65 315 aa5.01□□□□□ -1.61
ECHDC1-219ENST00000526299 MBD6Q96DN6 1003 aa5.01□□□□□ -1.61
ECHDC1-219ENST00000526299 PTPN18Q99952 460 aa5.01□□□□□ -1.61
ECHDC1-219ENST00000526299 GBP3Q9H0R5 595 aa5.01□□□□□ -1.61
ECHDC1-219ENST00000526299 BTG4Q9NY30 223 aa5.01□□□□□ -1.61
ECHDC1-219ENST00000526299 TRBV23OR9-2A0A075B6M9 112 aa5□□□□□ -1.61
ECHDC1-219ENST00000526299 PPM1BO75688 479 aa5□□□□□ -1.61
ECHDC1-219ENST00000526299 SPDYAQ5MJ70 313 aa5□□□□□ -1.61
ECHDC1-219ENST00000526299 FAM126BQ8IXS8 530 aa5□□□□□ -1.61
ECHDC1-219ENST00000526299 ARHGEF39Q8N4T4 335 aa5□□□□□ -1.61
ECHDC1-219ENST00000526299 ZSWIM3Q96MP5 696 aa5□□□□□ -1.61
ECHDC1-219ENST00000526299 WWC2-AS2Q96NR7 200 aa5□□□□□ -1.61
ECHDC1-219ENST00000526299 THBDP07204 575 aa4.99□□□□□ -1.61
ECHDC1-219ENST00000526299 PPP2CBP62714 309 aa4.99□□□□□ -1.61
ECHDC1-219ENST00000526299 PPP2CAP67775 309 aa4.99□□□□□ -1.61
ECHDC1-219ENST00000526299 GRB10Q13322 594 aa4.99□□□□□ -1.61
ECHDC1-219ENST00000526299 R3HDM1Q15032 1099 aaKnown RBP4.99□□□□□ -1.61
ECHDC1-219ENST00000526299 CR1LQ2VPA4 569 aa4.99□□□□□ -1.61
ECHDC1-219ENST00000526299 CCDC81Q6ZN84 652 aa4.99□□□□□ -1.61
ECHDC1-219ENST00000526299 MILR1Q7Z6M3 343 aa4.99□□□□□ -1.61
ECHDC1-219ENST00000526299 SEC14L1Q92503 715 aa4.99□□□□□ -1.61
ECHDC1-219ENST00000526299 YTHDC1Q96MU7 727 aaKnown RBP4.99□□□□□ -1.61
ECHDC1-219ENST00000526299 GZF1Q9H116 711 aaPredicted RBP4.99□□□□□ -1.61
ECHDC1-219ENST00000526299 BCL11AQ9H165 835 aa4.99□□□□□ -1.61
ECHDC1-219ENST00000526299 GPRC5CQ9NQ84 441 aa4.99□□□□□ -1.61
ECHDC1-219ENST00000526299 JADE2Q9NQC1 790 aa4.99□□□□□ -1.61
ECHDC1-219ENST00000526299 SUGT1Q9Y2Z0 365 aa4.99□□□□□ -1.61
ECHDC1-219ENST00000526299 C22orf46C9J442 243 aa4.98□□□□□ -1.61
ECHDC1-219ENST00000526299 PLS3P13797 630 aa4.98□□□□□ -1.61
ECHDC1-219ENST00000526299 IL13P35225 146 aa4.98□□□□□ -1.61
ECHDC1-219ENST00000526299 SELENOPP49908 381 aa4.98□□□□□ -1.61
ECHDC1-219ENST00000526299 EPHB4P54760 987 aa4.98□□□□□ -1.61
ECHDC1-219ENST00000526299 MLLT6P55198 1093 aaPredicted RBP4.98□□□□□ -1.61
ECHDC1-219ENST00000526299 INF2Q27J81 1249 aa4.98□□□□□ -1.61
ECHDC1-219ENST00000526299 ARHGEF18Q6ZSZ5 1173 aa4.98□□□□□ -1.61
ECHDC1-219ENST00000526299 RCC1LQ96I51 464 aaKnown RBP4.98□□□□□ -1.61
ECHDC1-219ENST00000526299 MMP19Q99542 508 aa4.98□□□□□ -1.61
ECHDC1-219ENST00000526299 TMEM168Q9H0V1 697 aa4.98□□□□□ -1.61
ECHDC1-219ENST00000526299 L2HGDHQ9H9P8 463 aa4.98□□□□□ -1.61
ECHDC1-219ENST00000526299 TCAF1Q9Y4C2 921 aa4.98□□□□□ -1.61
ECHDC1-219ENST00000526299 PATE3B3GLJ2 98 aa4.97□□□□□ -1.61
ECHDC1-219ENST00000526299 MUSKO15146 869 aa4.97□□□□□ -1.61
ECHDC1-219ENST00000526299 FPR2P25090 351 aa4.97□□□□□ -1.61
ECHDC1-219ENST00000526299 SLC7A5Q01650 507 aa4.97□□□□□ -1.61
ECHDC1-219ENST00000526299 SCRN1Q12765 414 aa4.97□□□□□ -1.61
ECHDC1-219ENST00000526299 LDLRAD1Q5T700 205 aa4.97□□□□□ -1.61
ECHDC1-219ENST00000526299 PKN3Q6P5Z2 889 aa4.97□□□□□ -1.61
ECHDC1-219ENST00000526299 KBTBD2Q8IY47 623 aa4.97□□□□□ -1.61
ECHDC1-219ENST00000526299 KLHL6Q8WZ60 621 aa4.97□□□□□ -1.61
ECHDC1-219ENST00000526299 COPS5Q92905 334 aa4.97□□□□□ -1.61
ECHDC1-219ENST00000526299 CRBNQ96SW2 442 aa4.97□□□□□ -1.61
ECHDC1-219ENST00000526299 PCDHGB7Q9Y5F8 929 aa4.97□□□□□ -1.61
ECHDC1-219ENST00000526299 B4GALT4O60513 344 aa4.96□□□□□ -1.62
ECHDC1-219ENST00000526299 KCNH1O95259 989 aa4.96□□□□□ -1.62
ECHDC1-219ENST00000526299 ZNF76P36508 570 aa4.96□□□□□ -1.62
ECHDC1-219ENST00000526299 SLC6A11P48066 632 aa4.96□□□□□ -1.62
ECHDC1-219ENST00000526299 NKX3-2P78367 333 aa4.96□□□□□ -1.62
ECHDC1-219ENST00000526299 ZNF394Q53GI3 561 aa4.96□□□□□ -1.62
ECHDC1-219ENST00000526299 ZNF513Q8N8E2 541 aaPredicted RBP4.96□□□□□ -1.62
ECHDC1-219ENST00000526299 Q8TCH9 128 aa4.96□□□□□ -1.62
ECHDC1-219ENST00000526299 ZCCHC14Q8WYQ9 949 aaKnown RBP4.96□□□□□ -1.62
ECHDC1-219ENST00000526299 YIPF4Q9BSR8 244 aa4.96□□□□□ -1.62
ECHDC1-219ENST00000526299 ZNF341Q9BYN7 854 aa4.96□□□□□ -1.62
ECHDC1-219ENST00000526299 PHAXQ9H814 394 aaKnown RBP4.96□□□□□ -1.62
ECHDC1-219ENST00000526299 APEX2Q9UBZ4 518 aa4.96□□□□□ -1.62
ECHDC1-219ENST00000526299 CROTQ9UKG9 612 aa4.96□□□□□ -1.62
ECHDC1-219ENST00000526299 A0A1W2PQH9 124 aa4.95□□□□□ -1.62
ECHDC1-219ENST00000526299 ZNF623O75123 536 aa4.95□□□□□ -1.62
ECHDC1-219ENST00000526299 SLFN13Q68D06 897 aa4.95□□□□□ -1.62
ECHDC1-219ENST00000526299 MEGF9Q9H1U4 602 aa4.95□□□□□ -1.62
ECHDC1-219ENST00000526299 NGRNQ9NPE2 291 aaKnown RBP4.95□□□□□ -1.62
ECHDC1-219ENST00000526299 AKT3Q9Y243 479 aa4.95□□□□□ -1.62
ECHDC1-219ENST00000526299 SLC12A7Q9Y666 1083 aa4.95□□□□□ -1.62
ECHDC1-219ENST00000526299 NPIPB8E9PQR5 432 aa4.94□□□□□ -1.62
ECHDC1-219ENST00000526299 FHL2Q14192 279 aa4.94□□□□□ -1.62
ECHDC1-219ENST00000526299 CEP68Q76N32 757 aa4.94□□□□□ -1.62
ECHDC1-219ENST00000526299 CLIC6Q96NY7 704 aa4.94□□□□□ -1.62
ECHDC1-219ENST00000526299 GINM1Q9NU53 330 aa4.94□□□□□ -1.62
ECHDC1-219ENST00000526299 ZDHHC9Q9Y397 364 aa4.94□□□□□ -1.62
ECHDC1-219ENST00000526299 TESMINQ9Y4I5 508 aa4.94□□□□□ -1.62
ECHDC1-219ENST00000526299 TGM1P22735 817 aa4.93□□□□□ -1.62
ECHDC1-219ENST00000526299 MROH9Q5TGP6 573 aa4.93□□□□□ -1.62
ECHDC1-219ENST00000526299 NLRP10Q86W26 655 aa4.93□□□□□ -1.62
ECHDC1-219ENST00000526299 RIOX2Q8IUF8 465 aa4.93□□□□□ -1.62
ECHDC1-219ENST00000526299 ARRDC4Q8NCT1 418 aa4.93□□□□□ -1.62
ECHDC1-219ENST00000526299 BACH2Q9BYV9 841 aa4.93□□□□□ -1.62
ECHDC1-219ENST00000526299 SEMA4AQ9H3S1 761 aa4.93□□□□□ -1.62
ECHDC1-219ENST00000526299 WASF3Q9UPY6 502 aa4.93□□□□□ -1.62
ECHDC1-219ENST00000526299 EMC9Q9Y3B6 208 aa4.93□□□□□ -1.62
ECHDC1-219ENST00000526299 BCL6P41182 706 aa4.92□□□□□ -1.62
ECHDC1-219ENST00000526299 EIF6P56537 245 aaKnown RBP4.92□□□□□ -1.62
ECHDC1-219ENST00000526299 TGFB2P61812 414 aa4.92□□□□□ -1.62
ECHDC1-219ENST00000526299 RPL11P62913 178 aaKnown RBP4.92□□□□□ -1.62
Retrieved 100 of 20,778 RNA–protein pairs in 53.7 ms