RNA–Protein interactions for RNA: ENST00000526058.1

CCS-203, Transcript of copper chaperone for superoxide dismutase, humanhuman

TSL 4

Gene CCS, Length 593 nt, Biotype retained intron, Subcellular localisation Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCS-203ENST00000526058 USP17L6PQ6QN14 398 aa19.63■□□□□ 0.73
CCS-203ENST00000526058 Q6ZUG5 572 aa19.63■□□□□ 0.73
CCS-203ENST00000526058 FAM126BQ8IXS8 530 aa19.63■□□□□ 0.73
CCS-203ENST00000526058 DDX41Q9UJV9 622 aaKnown RBP19.63■□□□□ 0.73
CCS-203ENST00000526058 A6NJR5 290 aa19.62■□□□□ 0.73
CCS-203ENST00000526058 RAG1P15918 1043 aa19.62■□□□□ 0.73
CCS-203ENST00000526058 FGD1P98174 961 aa19.62■□□□□ 0.73
CCS-203ENST00000526058 RTN1Q16799 776 aa19.62■□□□□ 0.73
CCS-203ENST00000526058 BLOC1S2Q6QNY1 142 aa19.62■□□□□ 0.73
CCS-203ENST00000526058 USP26Q9BXU7 913 aa19.62■□□□□ 0.73
CCS-203ENST00000526058 POLR3EQ9NVU0 708 aa19.62■□□□□ 0.73
CCS-203ENST00000526058 RBM28Q9NW13 759 aaKnown RBP19.62■□□□□ 0.73
CCS-203ENST00000526058 TBX21Q9UL17 535 aa19.62■□□□□ 0.73
CCS-203ENST00000526058 SCN10AQ9Y5Y9 1956 aa19.61■□□□□ 0.73
CCS-203ENST00000526058 CNTNAP5Q8WYK1 1306 aa19.61■□□□□ 0.73
CCS-203ENST00000526058 MEIS2O14770 477 aa19.61■□□□□ 0.73
CCS-203ENST00000526058 GH1P01241 217 aa19.61■□□□□ 0.73
CCS-203ENST00000526058 RPS6KB1P23443 525 aa19.61■□□□□ 0.73
CCS-203ENST00000526058 CDC27P30260 824 aa19.61■□□□□ 0.73
CCS-203ENST00000526058 ARHGAP1Q07960 439 aa19.61■□□□□ 0.73
CCS-203ENST00000526058 APOBRQ0VD83 1088 aa19.61■□□□□ 0.73
CCS-203ENST00000526058 GPKOWQ92917 476 aaPredicted RBP eCLIP19.61■□□□□ 0.73
CCS-203ENST00000526058 LRCH3Q96II8 777 aa19.61■□□□□ 0.73
CCS-203ENST00000526058 FAM217BQ9NTX9 383 aaPredicted RBP19.61■□□□□ 0.73
CCS-203ENST00000526058 NAP1L2Q9ULW6 460 aaPredicted RBP19.61■□□□□ 0.73
CCS-203ENST00000526058 MRVI1Q9Y6F6 885 aa19.61■□□□□ 0.73
CCS-203ENST00000526058 GOLGA8AA7E2F4 631 aa19.6■□□□□ 0.73
CCS-203ENST00000526058 GOLGA8BA8MQT2 603 aa19.6■□□□□ 0.73
CCS-203ENST00000526058 CD4P01730 458 aa19.6■□□□□ 0.73
CCS-203ENST00000526058 CASTP20810 708 aaKnown RBP19.6■□□□□ 0.73
CCS-203ENST00000526058 CCND2P30279 289 aa19.6■□□□□ 0.73
CCS-203ENST00000526058 FUT2Q10981 343 aa19.6■□□□□ 0.73
CCS-203ENST00000526058 BRDTQ58F21 947 aaPredicted RBP19.6■□□□□ 0.73
CCS-203ENST00000526058 SMARCC2Q8TAQ2 1214 aa19.6■□□□□ 0.73
CCS-203ENST00000526058 PPP1R13LQ8WUF5 828 aa19.6■□□□□ 0.73
CCS-203ENST00000526058 AFG1LQ8WV93 481 aa19.6■□□□□ 0.73
CCS-203ENST00000526058 BRF1Q92994 677 aa19.6■□□□□ 0.73
CCS-203ENST00000526058 FRMPD4Q14CM0 1322 aa19.59■□□□□ 0.73
CCS-203ENST00000526058 PIK3CDO00329 1044 aa19.59■□□□□ 0.73
CCS-203ENST00000526058 TLR3O15455 904 aaKnown RBP19.59■□□□□ 0.73
CCS-203ENST00000526058 EPB41L2O43491 1005 aaKnown RBP19.59■□□□□ 0.73
CCS-203ENST00000526058 TIMP1P01033 207 aa19.59■□□□□ 0.73
CCS-203ENST00000526058 PSMA5P28066 241 aa19.59■□□□□ 0.73
CCS-203ENST00000526058 MRPS9P82933 396 aaKnown RBP19.59■□□□□ 0.73
CCS-203ENST00000526058 SP2Q02086 613 aa19.59■□□□□ 0.73
CCS-203ENST00000526058 C9orf50Q5SZB4 431 aa19.59■□□□□ 0.73
CCS-203ENST00000526058 HEATR3Q7Z4Q2 680 aa19.59■□□□□ 0.73
CCS-203ENST00000526058 CUL5Q93034 780 aa19.59■□□□□ 0.73
CCS-203ENST00000526058 MTG1Q9BT17 334 aaPredicted RBP19.59■□□□□ 0.73
CCS-203ENST00000526058 TRPV6Q9H1D0 765 aa19.59■□□□□ 0.73
CCS-203ENST00000526058 PSTPIP2Q9H939 334 aa19.59■□□□□ 0.73
CCS-203ENST00000526058 SORBS3O60504 671 aa19.58■□□□□ 0.72
CCS-203ENST00000526058 B4GALT4O60513 344 aa19.58■□□□□ 0.72
CCS-203ENST00000526058 MMP3P08254 477 aa19.58■□□□□ 0.72
CCS-203ENST00000526058 ADD1P35611 737 aaKnown RBP19.58■□□□□ 0.72
CCS-203ENST00000526058 EPHB4P54760 987 aa19.58■□□□□ 0.72
CCS-203ENST00000526058 SHHQ15465 462 aa19.58■□□□□ 0.72
CCS-203ENST00000526058 LRIT3Q3SXY7 679 aa19.58■□□□□ 0.72
CCS-203ENST00000526058 WWC2Q6AWC2 1192 aa19.58■□□□□ 0.72
CCS-203ENST00000526058 AGXT2Q9BYV1 514 aa19.58■□□□□ 0.72
CCS-203ENST00000526058 V9GY48 417 aaPredicted RBP19.58■□□□□ 0.72
CCS-203ENST00000526058 DOCK5Q9H7D0 1870 aa19.57■□□□□ 0.72
CCS-203ENST00000526058 KPNA6O60684 536 aa19.57■□□□□ 0.72
CCS-203ENST00000526058 METAP2P50579 478 aaKnown RBP eCLIP19.57■□□□□ 0.72
CCS-203ENST00000526058 RCAN1P53805 252 aa19.57■□□□□ 0.72
CCS-203ENST00000526058 UBE2SQ16763 222 aa19.57■□□□□ 0.72
CCS-203ENST00000526058 NBPF20Q3BBV1 942 aa19.57■□□□□ 0.72
CCS-203ENST00000526058 TYW1BQ6NUM6 668 aa19.57■□□□□ 0.72
CCS-203ENST00000526058 FBXL16Q8N461 479 aa19.57■□□□□ 0.72
CCS-203ENST00000526058 EMID1Q96A84 441 aaPredicted RBP19.57■□□□□ 0.72
CCS-203ENST00000526058 SEZ6LQ9BYH1 1024 aa19.57■□□□□ 0.72
CCS-203ENST00000526058 PPP1R12CQ9BZL4 782 aa19.57■□□□□ 0.72
CCS-203ENST00000526058 ALDH8A1Q9H2A2 487 aaPredicted RBP19.57■□□□□ 0.72
CCS-203ENST00000526058 RTEL1Q9NZ71 1219 aa19.57■□□□□ 0.72
CCS-203ENST00000526058 FPGSQ05932 587 aa19.56■□□□□ 0.72
CCS-203ENST00000526058 LAMC2Q13753 1193 aa19.56■□□□□ 0.72
CCS-203ENST00000526058 MFSD5Q6N075 450 aa19.56■□□□□ 0.72
CCS-203ENST00000526058 KCNV1Q6PIU1 500 aa19.56■□□□□ 0.72
CCS-203ENST00000526058 RUFY3Q7L099 469 aa19.56■□□□□ 0.72
CCS-203ENST00000526058 DHX37Q8IY37 1157 aaKnown RBP19.56■□□□□ 0.72
CCS-203ENST00000526058 BCAS3Q9H6U6 928 aa19.56■□□□□ 0.72
CCS-203ENST00000526058 ZSWIM6Q9HCJ5 1215 aa19.56■□□□□ 0.72
CCS-203ENST00000526058 TRMT13Q9NUP7 481 aaKnown RBP19.56■□□□□ 0.72
CCS-203ENST00000526058 GGPS1O95749 300 aa19.55■□□□□ 0.72
CCS-203ENST00000526058 UBA1P22314 1058 aaKnown RBP19.55■□□□□ 0.72
CCS-203ENST00000526058 CYP2C18P33260 490 aa19.55■□□□□ 0.72
CCS-203ENST00000526058 CHMP4BP1P59074 171 aa19.55■□□□□ 0.72
CCS-203ENST00000526058 FAM47CQ5HY64 1035 aa19.55■□□□□ 0.72
CCS-203ENST00000526058 CELF3Q5SZQ8 465 aaKnown RBP19.55■□□□□ 0.72
CCS-203ENST00000526058 MYSM1Q5VVJ2 828 aa19.55■□□□□ 0.72
CCS-203ENST00000526058 KAT2BQ92831 832 aa19.55■□□□□ 0.72
CCS-203ENST00000526058 UMODL1Q5DID0 1318 aa19.54■□□□□ 0.72
CCS-203ENST00000526058 TGFB3P10600 412 aa19.54■□□□□ 0.72
CCS-203ENST00000526058 NAPAP54920 295 aa19.54■□□□□ 0.72
CCS-203ENST00000526058 SEMA3FQ13275 785 aa19.54■□□□□ 0.72
CCS-203ENST00000526058 DGKDQ16760 1214 aa19.54■□□□□ 0.72
CCS-203ENST00000526058 PCNX4Q63HM2 1172 aa19.54■□□□□ 0.72
CCS-203ENST00000526058 PPTC7Q8NI37 304 aa19.54■□□□□ 0.72
CCS-203ENST00000526058 INPP4AQ96PE3 977 aaPredicted RBP19.54■□□□□ 0.72
CCS-203ENST00000526058 HIPK3Q9H422 1215 aa19.54■□□□□ 0.72
Retrieved 100 of 20,778 RNA–protein pairs in 19.8 ms