RNA–Protein interactions for RNA: ENST00000526009.5

CLNS1A-205, Transcript of chloride nucleotide-sensitive channel 1A, humanhuman

TSL 3

Gene CLNS1A, Length 747 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLNS1A-205ENST00000526009 UPF3AQ9H1J1 476 aaKnown RBP8.96□□□□□ -0.98
CLNS1A-205ENST00000526009 KANSL2Q9H9L4 492 aa8.96□□□□□ -0.98
CLNS1A-205ENST00000526009 PGPEP1Q9NXJ5 209 aa8.96□□□□□ -0.98
CLNS1A-205ENST00000526009 RIPK3Q9Y572 518 aa8.96□□□□□ -0.98
CLNS1A-205ENST00000526009 PCDHB11Q9Y5F2 797 aa8.96□□□□□ -0.98
CLNS1A-205ENST00000526009 PCDHA11Q9Y5I1 949 aa8.96□□□□□ -0.98
CLNS1A-205ENST00000526009 ZNF532Q9HCE3 1301 aa8.96□□□□□ -0.98
CLNS1A-205ENST00000526009 REV3LO60673 3130 aa8.95□□□□□ -0.98
CLNS1A-205ENST00000526009 CAPN5O15484 640 aaPredicted RBP8.95□□□□□ -0.98
CLNS1A-205ENST00000526009 PDIA4P13667 645 aaKnown RBP8.95□□□□□ -0.98
CLNS1A-205ENST00000526009 PDE6AP16499 860 aa8.95□□□□□ -0.98
CLNS1A-205ENST00000526009 POU3F3P20264 500 aaPredicted RBP8.95□□□□□ -0.98
CLNS1A-205ENST00000526009 CDK8P49336 464 aa8.95□□□□□ -0.98
CLNS1A-205ENST00000526009 CCL23P55773 120 aa8.95□□□□□ -0.98
CLNS1A-205ENST00000526009 TSGA10IPQ3SY00 556 aa8.95□□□□□ -0.98
CLNS1A-205ENST00000526009 SNRNP48Q6IEG0 339 aaKnown RBP8.95□□□□□ -0.98
CLNS1A-205ENST00000526009 CXCL17Q6UXB2 119 aa8.95□□□□□ -0.98
CLNS1A-205ENST00000526009 AMOTL1Q8IY63 956 aa8.95□□□□□ -0.98
CLNS1A-205ENST00000526009 CPXCR1Q8N123 301 aa8.95□□□□□ -0.98
CLNS1A-205ENST00000526009 LCORLQ8N3X6 602 aa8.95□□□□□ -0.98
CLNS1A-205ENST00000526009 SLC43A3Q8NBI5 491 aa8.95□□□□□ -0.98
CLNS1A-205ENST00000526009 SLF1Q9BQI6 1058 aa8.95□□□□□ -0.98
CLNS1A-205ENST00000526009 ZFAND3Q9H8U3 227 aa8.95□□□□□ -0.98
CLNS1A-205ENST00000526009 ATP8A2Q9NTI2 1148 aa8.95□□□□□ -0.98
CLNS1A-205ENST00000526009 COG5Q9UP83 839 aa8.95□□□□□ -0.98
CLNS1A-205ENST00000526009 TNNQ9UQP3 1299 aa8.95□□□□□ -0.98
CLNS1A-205ENST00000526009 MTCH2Q9Y6C9 303 aa8.95□□□□□ -0.98
CLNS1A-205ENST00000526009 RFXAPO00287 272 aa8.94□□□□□ -0.98
CLNS1A-205ENST00000526009 PIK3CDO00329 1044 aa8.94□□□□□ -0.98
CLNS1A-205ENST00000526009 ATP2A1O14983 1001 aa8.94□□□□□ -0.98
CLNS1A-205ENST00000526009 AXIN1O15169 862 aa8.94□□□□□ -0.98
CLNS1A-205ENST00000526009 CTAGE5O15320 804 aa8.94□□□□□ -0.98
CLNS1A-205ENST00000526009 CABYRO75952 493 aa8.94□□□□□ -0.98
CLNS1A-205ENST00000526009 AVPP01185 164 aa8.94□□□□□ -0.98
CLNS1A-205ENST00000526009 TIMP2P16035 220 aa8.94□□□□□ -0.98
CLNS1A-205ENST00000526009 ATP2A2P16615 1042 aaKnown RBP8.94□□□□□ -0.98
CLNS1A-205ENST00000526009 NKX3-2P78367 333 aa8.94□□□□□ -0.98
CLNS1A-205ENST00000526009 BEX3Q00994 111 aa8.94□□□□□ -0.98
CLNS1A-205ENST00000526009 ITGA7Q13683 1181 aa8.94□□□□□ -0.98
CLNS1A-205ENST00000526009 TMEM67Q5HYA8 995 aa8.94□□□□□ -0.98
CLNS1A-205ENST00000526009 C12orf60Q5U649 245 aa8.94□□□□□ -0.98
CLNS1A-205ENST00000526009 NOL8Q76FK4 1167 aaKnown RBP8.94□□□□□ -0.98
CLNS1A-205ENST00000526009 ARMCX2Q7L311 632 aa8.94□□□□□ -0.98
CLNS1A-205ENST00000526009 AACSQ86V21 672 aa8.94□□□□□ -0.98
CLNS1A-205ENST00000526009 ANKRD35Q8N283 1001 aa8.94□□□□□ -0.98
CLNS1A-205ENST00000526009 PHTF2Q8N3S3 785 aa8.94□□□□□ -0.98
CLNS1A-205ENST00000526009 TMEM57Q8N5G2 664 aa8.94□□□□□ -0.98
CLNS1A-205ENST00000526009 PRPF38AQ8NAV1 312 aaKnown RBP8.94□□□□□ -0.98
CLNS1A-205ENST00000526009 SEZ6LQ9BYH1 1024 aa8.94□□□□□ -0.98
CLNS1A-205ENST00000526009 ARMT1Q9H993 441 aa8.94□□□□□ -0.98
CLNS1A-205ENST00000526009 CTDP1Q9Y5B0 961 aaPredicted RBP8.94□□□□□ -0.98
CLNS1A-205ENST00000526009 UMODL1Q5DID0 1318 aa8.94□□□□□ -0.98
CLNS1A-205ENST00000526009 PRRC2BQ5JSZ5 2229 aaKnown RBP8.93□□□□□ -0.98
CLNS1A-205ENST00000526009 CYP2D7A0A087X1C5 515 aa8.93□□□□□ -0.98
CLNS1A-205ENST00000526009 TCRBV5S4A2TA0A5A2 114 aa8.93□□□□□ -0.98
CLNS1A-205ENST00000526009 USP17L12C9JPN9 530 aa8.93□□□□□ -0.98
CLNS1A-205ENST00000526009 USP17L21D6R901 530 aa8.93□□□□□ -0.98
CLNS1A-205ENST00000526009 F5H6K3 240 aa8.93□□□□□ -0.98
CLNS1A-205ENST00000526009 SMIM22K7EJ46 135 aa8.93□□□□□ -0.98
CLNS1A-205ENST00000526009 PRKAB2O43741 272 aa8.93□□□□□ -0.98
CLNS1A-205ENST00000526009 ZBED4O75132 1171 aa8.93□□□□□ -0.98
CLNS1A-205ENST00000526009 SKIP12755 728 aa8.93□□□□□ -0.98
CLNS1A-205ENST00000526009 TNFAIP2Q03169 654 aa8.93□□□□□ -0.98
CLNS1A-205ENST00000526009 KLRC3Q07444 240 aa8.93□□□□□ -0.98
CLNS1A-205ENST00000526009 TRAF7Q6Q0C0 670 aa8.93□□□□□ -0.98
CLNS1A-205ENST00000526009 C16orf86Q6ZW13 317 aa8.93□□□□□ -0.98
CLNS1A-205ENST00000526009 ERC1Q8IUD2 1116 aa8.93□□□□□ -0.98
CLNS1A-205ENST00000526009 CCDC144CPQ8IYA2 1237 aa8.93□□□□□ -0.98
CLNS1A-205ENST00000526009 NUP88Q99567 741 aaPredicted RBP8.93□□□□□ -0.98
CLNS1A-205ENST00000526009 NOC4LQ9BVI4 516 aaKnown RBP8.93□□□□□ -0.98
CLNS1A-205ENST00000526009 KLF16Q9BXK1 252 aaPredicted RBP8.93□□□□□ -0.98
CLNS1A-205ENST00000526009 WNT8AQ9H1J5 351 aa8.93□□□□□ -0.98
CLNS1A-205ENST00000526009 CERS4Q9HA82 394 aa8.93□□□□□ -0.98
CLNS1A-205ENST00000526009 CYLDQ9NQC7 956 aa8.93□□□□□ -0.98
CLNS1A-205ENST00000526009 FBXO40Q9UH90 709 aa8.93□□□□□ -0.98
CLNS1A-205ENST00000526009 DOLKQ9UPQ8 538 aa8.93□□□□□ -0.98
CLNS1A-205ENST00000526009 COL11A1P12107 1806 aaPredicted RBP8.93□□□□□ -0.98
CLNS1A-205ENST00000526009 NAV1Q8NEY1 1877 aa8.93□□□□□ -0.98
CLNS1A-205ENST00000526009 PARP14Q460N5 1801 aa8.92□□□□□ -0.98
CLNS1A-205ENST00000526009 GRIN2DO15399 1336 aa8.92□□□□□ -0.98
CLNS1A-205ENST00000526009 C11orf97A0A1B0GVM6 126 aaPredicted RBP8.92□□□□□ -0.98
CLNS1A-205ENST00000526009 GOLIM4O00461 696 aa8.92□□□□□ -0.98
CLNS1A-205ENST00000526009 ST8SIA5O15466 376 aa8.92□□□□□ -0.98
CLNS1A-205ENST00000526009 ZEB2O60315 1214 aa8.92□□□□□ -0.98
CLNS1A-205ENST00000526009 B4GALT4O60513 344 aa8.92□□□□□ -0.98
CLNS1A-205ENST00000526009 CA3P07451 260 aa8.92□□□□□ -0.98
CLNS1A-205ENST00000526009 PFKMP08237 780 aa8.92□□□□□ -0.98
CLNS1A-205ENST00000526009 FSCN1Q16658 493 aaKnown RBP8.92□□□□□ -0.98
CLNS1A-205ENST00000526009 CTC1Q2NKJ3 1217 aa8.92□□□□□ -0.98
CLNS1A-205ENST00000526009 OXLD1Q5BKU9 147 aa8.92□□□□□ -0.98
CLNS1A-205ENST00000526009 TLK2Q86UE8 772 aa8.92□□□□□ -0.98
CLNS1A-205ENST00000526009 ALYREFQ86V81 257 aaKnown RBP8.92□□□□□ -0.98
CLNS1A-205ENST00000526009 CHST13Q8NET6 341 aa8.92□□□□□ -0.98
CLNS1A-205ENST00000526009 PPIL4Q8WUA2 492 aaKnown RBP eCLIP8.92□□□□□ -0.98
CLNS1A-205ENST00000526009 KIFC2Q96AC6 838 aa8.92□□□□□ -0.98
CLNS1A-205ENST00000526009 SCLYQ96I15 445 aa8.92□□□□□ -0.98
CLNS1A-205ENST00000526009 FGD4Q96M96 766 aa8.92□□□□□ -0.98
CLNS1A-205ENST00000526009 DNAJC2Q99543 621 aaKnown RBP8.92□□□□□ -0.98
CLNS1A-205ENST00000526009 KATNBL1Q9H079 304 aa8.92□□□□□ -0.98
CLNS1A-205ENST00000526009 AP5M1Q9H0R1 490 aa8.92□□□□□ -0.98
Retrieved 100 of 20,778 RNA–protein pairs in 75.4 ms