RNA–Protein interactions for RNA: ENST00000525670.5

SVIP-202, Transcript of small VCP interacting protein, humanhuman

TSL 2

Gene SVIP, Length 581 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SVIP-202ENST00000525670 IL13P35225 146 aa6.86□□□□□ -1.31
SVIP-202ENST00000525670 EIF4A3P38919 411 aaKnown RBP6.86□□□□□ -1.31
SVIP-202ENST00000525670 CLEC16AQ2KHT3 1053 aa6.86□□□□□ -1.31
SVIP-202ENST00000525670 ZNF530Q6P9A1 599 aaPredicted RBP6.86□□□□□ -1.31
SVIP-202ENST00000525670 SPPL2CQ8IUH8 684 aa6.86□□□□□ -1.31
SVIP-202ENST00000525670 ZSCAN18Q8TBC5 510 aaPredicted RBP6.86□□□□□ -1.31
SVIP-202ENST00000525670 ENOX1Q8TC92 643 aaKnown RBP6.86□□□□□ -1.31
SVIP-202ENST00000525670 KCNK12Q9HB15 430 aa6.86□□□□□ -1.31
SVIP-202ENST00000525670 SUPT16HQ9Y5B9 1047 aaKnown RBP6.86□□□□□ -1.31
SVIP-202ENST00000525670 NCAPD2Q15021 1401 aa6.85□□□□□ -1.31
SVIP-202ENST00000525670 NPC1L1Q9UHC9 1359 aa6.85□□□□□ -1.31
SVIP-202ENST00000525670 SHISA3A0PJX4 238 aa6.85□□□□□ -1.31
SVIP-202ENST00000525670 CYP27B1O15528 508 aa6.85□□□□□ -1.31
SVIP-202ENST00000525670 LRRC56Q8IYG6 542 aaPredicted RBP6.85□□□□□ -1.31
SVIP-202ENST00000525670 RNF32Q9H0A6 362 aa6.85□□□□□ -1.31
SVIP-202ENST00000525670 ASCC2Q9H1I8 757 aaPredicted RBP6.85□□□□□ -1.31
SVIP-202ENST00000525670 BRMS1Q9HCU9 246 aa6.85□□□□□ -1.31
SVIP-202ENST00000525670 PCDHB14Q9Y5E9 798 aa6.85□□□□□ -1.31
SVIP-202ENST00000525670 U2AF1L5P0DN76 240 aaPredicted RBP6.84□□□□□ -1.31
SVIP-202ENST00000525670 MED14OSP0DP75 135 aa6.84□□□□□ -1.31
SVIP-202ENST00000525670 RAG1P15918 1043 aa6.84□□□□□ -1.31
SVIP-202ENST00000525670 RNF4P78317 190 aa6.84□□□□□ -1.31
SVIP-202ENST00000525670 U2AF1Q01081 240 aaKnown RBP eCLIP6.84□□□□□ -1.31
SVIP-202ENST00000525670 TEKQ02763 1124 aa6.84□□□□□ -1.31
SVIP-202ENST00000525670 CHRNEQ04844 493 aa6.84□□□□□ -1.31
SVIP-202ENST00000525670 DUSP4Q13115 394 aa6.84□□□□□ -1.31
SVIP-202ENST00000525670 ARSHQ5FYA8 562 aa6.84□□□□□ -1.31
SVIP-202ENST00000525670 C1QL4Q86Z23 238 aa6.84□□□□□ -1.31
SVIP-202ENST00000525670 SIAH1Q8IUQ4 282 aa6.84□□□□□ -1.31
SVIP-202ENST00000525670 ZNF296Q8WUU4 475 aaPredicted RBP6.84□□□□□ -1.31
SVIP-202ENST00000525670 CFAP53Q96M91 514 aa6.84□□□□□ -1.31
SVIP-202ENST00000525670 BCL2L13Q9BXK5 485 aa6.84□□□□□ -1.31
SVIP-202ENST00000525670 SLC6A17Q9H1V8 727 aa6.84□□□□□ -1.31
SVIP-202ENST00000525670 CWC22Q9HCG8 908 aaKnown RBP6.84□□□□□ -1.31
SVIP-202ENST00000525670 GMIPQ9P107 970 aa6.84□□□□□ -1.31
SVIP-202ENST00000525670 ZNF281Q9Y2X9 895 aa6.84□□□□□ -1.31
SVIP-202ENST00000525670 KDM6AO15550 1401 aaPredicted RBP6.84□□□□□ -1.32
SVIP-202ENST00000525670 TUBGCP6Q96RT7 1819 aa6.83□□□□□ -1.32
SVIP-202ENST00000525670 UBOX5O94941 541 aa6.83□□□□□ -1.32
SVIP-202ENST00000525670 GLDCP23378 1020 aa6.83□□□□□ -1.32
SVIP-202ENST00000525670 PRKAR2BP31323 418 aa6.83□□□□□ -1.32
SVIP-202ENST00000525670 NMIQ13287 307 aaPredicted RBP6.83□□□□□ -1.32
SVIP-202ENST00000525670 R3HDM1Q15032 1099 aaKnown RBP6.83□□□□□ -1.32
SVIP-202ENST00000525670 SNX17Q15036 470 aa6.83□□□□□ -1.32
SVIP-202ENST00000525670 CDCP2Q5VXM1 449 aa6.83□□□□□ -1.32
SVIP-202ENST00000525670 IRF2BP1Q8IU81 584 aa6.83□□□□□ -1.32
SVIP-202ENST00000525670 CCDC146Q8IYE0 955 aa6.83□□□□□ -1.32
SVIP-202ENST00000525670 SYTL5Q8TDW5 730 aaPredicted RBP6.83□□□□□ -1.32
SVIP-202ENST00000525670 LINC01599Q8WXQ3 324 aa6.83□□□□□ -1.32
SVIP-202ENST00000525670 KCNN1Q92952 543 aa6.83□□□□□ -1.32
SVIP-202ENST00000525670 CSTF2TQ9H0L4 616 aaKnown RBP eCLIP6.83□□□□□ -1.32
SVIP-202ENST00000525670 EHMT1Q9H9B1 1298 aa6.83□□□□□ -1.32
SVIP-202ENST00000525670 MYBBP1AQ9BQG0 1328 aaKnown RBP6.82□□□□□ -1.32
SVIP-202ENST00000525670 ETV2O00321 342 aaPredicted RBP6.82□□□□□ -1.32
SVIP-202ENST00000525670 PHKG2P15735 406 aa6.82□□□□□ -1.32
SVIP-202ENST00000525670 RAD51AP2Q09MP3 1159 aa6.82□□□□□ -1.32
SVIP-202ENST00000525670 MRPL58Q14197 206 aaKnown RBP6.82□□□□□ -1.32
SVIP-202ENST00000525670 TIGD5Q53EQ6 642 aa6.82□□□□□ -1.32
SVIP-202ENST00000525670 C1orf141Q5JVX7 400 aa6.82□□□□□ -1.32
SVIP-202ENST00000525670 RNF111Q6ZNA4 994 aa6.82□□□□□ -1.32
SVIP-202ENST00000525670 ATG14Q6ZNE5 492 aa6.82□□□□□ -1.32
SVIP-202ENST00000525670 HS2ST1Q7LGA3 356 aa6.82□□□□□ -1.32
SVIP-202ENST00000525670 ANKS4BQ8N8V4 417 aa6.82□□□□□ -1.32
SVIP-202ENST00000525670 DAGLBQ8NCG7 672 aa6.82□□□□□ -1.32
SVIP-202ENST00000525670 CD320Q9NPF0 282 aa6.82□□□□□ -1.32
SVIP-202ENST00000525670 EBF1Q9UH73 591 aa6.82□□□□□ -1.32
SVIP-202ENST00000525670 GGT7Q9UJ14 662 aa6.82□□□□□ -1.32
SVIP-202ENST00000525670 YBX2Q9Y2T7 364 aaKnown RBP6.82□□□□□ -1.32
SVIP-202ENST00000525670 RGPD3A6NKT7 1758 aaPredicted RBP6.82□□□□□ -1.32
SVIP-202ENST00000525670 RGPD4Q7Z3J3 1758 aa6.82□□□□□ -1.32
SVIP-202ENST00000525670 SCN11AQ9UI33 1791 aa6.82□□□□□ -1.32
SVIP-202ENST00000525670 KDRP35968 1356 aa6.82□□□□□ -1.32
SVIP-202ENST00000525670 DLG5Q8TDM6 1919 aa6.82□□□□□ -1.32
SVIP-202ENST00000525670 C5P01031 1676 aa6.81□□□□□ -1.32
SVIP-202ENST00000525670 TCAF2A6NFQ2 919 aa6.81□□□□□ -1.32
SVIP-202ENST00000525670 NPIPB6E9PJ23 425 aa6.81□□□□□ -1.32
SVIP-202ENST00000525670 CRKP46108 304 aa6.81□□□□□ -1.32
SVIP-202ENST00000525670 KCNA10Q16322 511 aa6.81□□□□□ -1.32
SVIP-202ENST00000525670 MTHFSDQ2M296 383 aaKnown RBP6.81□□□□□ -1.32
SVIP-202ENST00000525670 NBPF9Q3BBW0 867 aa6.81□□□□□ -1.32
SVIP-202ENST00000525670 CCDC184Q52MB2 194 aa6.81□□□□□ -1.32
SVIP-202ENST00000525670 PLEKHO1Q53GL0 409 aaPredicted RBP6.81□□□□□ -1.32
SVIP-202ENST00000525670 NBPF12Q5TAG4 269 aaPredicted RBP6.81□□□□□ -1.32
SVIP-202ENST00000525670 REXO1Q8N1G1 1221 aaKnown RBP6.81□□□□□ -1.32
SVIP-202ENST00000525670 ZNF655Q8N720 491 aaPredicted RBP6.81□□□□□ -1.32
SVIP-202ENST00000525670 CAMKK2Q96RR4 588 aa6.81□□□□□ -1.32
SVIP-202ENST00000525670 HDAC8Q9BY41 377 aa6.81□□□□□ -1.32
SVIP-202ENST00000525670 KRTAP4-7Q9BYR0 210 aa6.81□□□□□ -1.32
SVIP-202ENST00000525670 BCL11AQ9H165 835 aa6.81□□□□□ -1.32
SVIP-202ENST00000525670 CNNM2Q9H8M5 875 aa6.81□□□□□ -1.32
SVIP-202ENST00000525670 RRP7AQ9Y3A4 280 aaKnown RBP6.81□□□□□ -1.32
SVIP-202ENST00000525670 LY75O60449 1722 aa6.81□□□□□ -1.32
SVIP-202ENST00000525670 PALLDQ8WX93 1383 aa6.81□□□□□ -1.32
SVIP-202ENST00000525670 PAPPAQ13219 1627 aa6.8□□□□□ -1.32
SVIP-202ENST00000525670 ZSCAN22P10073 491 aaPredicted RBP6.8□□□□□ -1.32
SVIP-202ENST00000525670 CCNFP41002 786 aa6.8□□□□□ -1.32
SVIP-202ENST00000525670 DCTN1Q14203 1278 aa6.8□□□□□ -1.32
SVIP-202ENST00000525670 RALBP1Q15311 655 aa6.8□□□□□ -1.32
SVIP-202ENST00000525670 TXNRD1Q16881 649 aa6.8□□□□□ -1.32
SVIP-202ENST00000525670 ZNF827Q17R98 1081 aa6.8□□□□□ -1.32
Retrieved 100 of 20,778 RNA–protein pairs in 32.5 ms