RNA–Protein interactions for RNA: ENST00000525504.5

CCDC90B-204, Transcript of coiled-coil domain containing 90B, humanhuman

TSL 3

Gene CCDC90B, Length 1,232 nt, Biotype processed transcript, Subcellular localisation Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC90B-204ENST00000525504 ZNF792Q3KQV3 632 aa7.07□□□□□ -1.28
CCDC90B-204ENST00000525504 FAM83BQ5T0W9 1011 aa7.07□□□□□ -1.28
CCDC90B-204ENST00000525504 WDR78Q5VTH9 848 aa7.07□□□□□ -1.28
CCDC90B-204ENST00000525504 C1orf229Q6ZS94 237 aaPredicted RBP7.07□□□□□ -1.28
CCDC90B-204ENST00000525504 MSL3Q8N5Y2 521 aaKnown RBP7.07□□□□□ -1.28
CCDC90B-204ENST00000525504 MAML3Q96JK9 1138 aa7.07□□□□□ -1.28
CCDC90B-204ENST00000525504 GDF15Q99988 308 aa7.07□□□□□ -1.28
CCDC90B-204ENST00000525504 SLF1Q9BQI6 1058 aa7.07□□□□□ -1.28
CCDC90B-204ENST00000525504 FSD1Q9BTV5 496 aa7.07□□□□□ -1.28
CCDC90B-204ENST00000525504 TEX13BQ9BXU2 312 aa7.07□□□□□ -1.28
CCDC90B-204ENST00000525504 RWDD1Q9H446 243 aaPredicted RBP7.07□□□□□ -1.28
CCDC90B-204ENST00000525504 OSBPL3Q9H4L5 887 aa7.07□□□□□ -1.28
CCDC90B-204ENST00000525504 SLC38A10Q9HBR0 1119 aa7.07□□□□□ -1.28
CCDC90B-204ENST00000525504 CWC22Q9HCG8 908 aaKnown RBP7.07□□□□□ -1.28
CCDC90B-204ENST00000525504 MYH13Q9UKX3 1938 aa7.07□□□□□ -1.28
CCDC90B-204ENST00000525504 SIPA1L1O43166 1804 aa7.06□□□□□ -1.28
CCDC90B-204ENST00000525504 PHIPQ8WWQ0 1821 aa7.06□□□□□ -1.28
CCDC90B-204ENST00000525504 DNM1LO00429 736 aa7.06□□□□□ -1.28
CCDC90B-204ENST00000525504 ORC4O43929 436 aa7.06□□□□□ -1.28
CCDC90B-204ENST00000525504 PRDM1O75626 825 aa7.06□□□□□ -1.28
CCDC90B-204ENST00000525504 FGAP02671 866 aa7.06□□□□□ -1.28
CCDC90B-204ENST00000525504 PTGIRP43119 386 aa7.06□□□□□ -1.28
CCDC90B-204ENST00000525504 GATA4P43694 442 aa7.06□□□□□ -1.28
CCDC90B-204ENST00000525504 TFAP4Q01664 338 aa7.06□□□□□ -1.28
CCDC90B-204ENST00000525504 NUCB1Q02818 461 aa7.06□□□□□ -1.28
CCDC90B-204ENST00000525504 RSPO4Q2I0M5 234 aaPredicted RBP7.06□□□□□ -1.28
CCDC90B-204ENST00000525504 MCMDC2Q4G0Z9 681 aa7.06□□□□□ -1.28
CCDC90B-204ENST00000525504 INTS6LQ5JSJ4 861 aaKnown RBP7.06□□□□□ -1.28
CCDC90B-204ENST00000525504 VPS53Q5VIR6 699 aa7.06□□□□□ -1.28
CCDC90B-204ENST00000525504 MAMDC4Q6UXC1 1216 aa7.06□□□□□ -1.28
CCDC90B-204ENST00000525504 NCAPG2Q86XI2 1143 aa7.06□□□□□ -1.28
CCDC90B-204ENST00000525504 KDF1Q8NAX2 398 aaPredicted RBP7.06□□□□□ -1.28
CCDC90B-204ENST00000525504 ARRDC4Q8NCT1 418 aa7.06□□□□□ -1.28
CCDC90B-204ENST00000525504 NUP88Q99567 741 aaPredicted RBP7.06□□□□□ -1.28
CCDC90B-204ENST00000525504 TINF2Q9BSI4 451 aa7.06□□□□□ -1.28
CCDC90B-204ENST00000525504 NAPBQ9H115 298 aa7.06□□□□□ -1.28
CCDC90B-204ENST00000525504 IL17RBQ9NRM6 502 aa7.06□□□□□ -1.28
CCDC90B-204ENST00000525504 FEM1BQ9UK73 627 aa7.06□□□□□ -1.28
CCDC90B-204ENST00000525504 RIPK3Q9Y572 518 aa7.06□□□□□ -1.28
CCDC90B-204ENST00000525504 TACC3Q9Y6A5 838 aa7.06□□□□□ -1.28
CCDC90B-204ENST00000525504 DOCK1Q14185 1865 aa7.06□□□□□ -1.28
CCDC90B-204ENST00000525504 PLIN4Q96Q06 1357 aa7.06□□□□□ -1.28
CCDC90B-204ENST00000525504 LAMA3Q16787 3333 aa7.06□□□□□ -1.28
CCDC90B-204ENST00000525504 SZT2Q5T011 3432 aa7.05□□□□□ -1.28
CCDC90B-204ENST00000525504 ZBED4O75132 1171 aa7.05□□□□□ -1.28
CCDC90B-204ENST00000525504 ZNF865P0CJ78 1059 aaPredicted RBP7.05□□□□□ -1.28
CCDC90B-204ENST00000525504 TSPY3P0CV98 308 aa7.05□□□□□ -1.28
CCDC90B-204ENST00000525504 TSPY8P0CW00 308 aa7.05□□□□□ -1.28
CCDC90B-204ENST00000525504 CLK2P49760 499 aaKnown RBP7.05□□□□□ -1.28
CCDC90B-204ENST00000525504 PLS1Q14651 629 aa7.05□□□□□ -1.28
CCDC90B-204ENST00000525504 KCTD2Q14681 263 aa7.05□□□□□ -1.28
CCDC90B-204ENST00000525504 SNX17Q15036 470 aa7.05□□□□□ -1.28
CCDC90B-204ENST00000525504 LRRC26Q2I0M4 334 aa7.05□□□□□ -1.28
CCDC90B-204ENST00000525504 FAM47AQ5JRC9 791 aa7.05□□□□□ -1.28
CCDC90B-204ENST00000525504 NKAPLQ5M9Q1 402 aa7.05□□□□□ -1.28
CCDC90B-204ENST00000525504 PRAMEF19Q5SWL8 479 aa7.05□□□□□ -1.28
CCDC90B-204ENST00000525504 C1orf53Q5VUE5 145 aa7.05□□□□□ -1.28
CCDC90B-204ENST00000525504 SLFN13Q68D06 897 aa7.05□□□□□ -1.28
CCDC90B-204ENST00000525504 CCDC129Q6ZRS4 1044 aa7.05□□□□□ -1.28
CCDC90B-204ENST00000525504 CHD1LQ86WJ1 897 aa7.05□□□□□ -1.28
CCDC90B-204ENST00000525504 PLEKHM2Q8IWE5 1019 aa7.05□□□□□ -1.28
CCDC90B-204ENST00000525504 GOLGA6L1Q8N7Z2 621 aa7.05□□□□□ -1.28
CCDC90B-204ENST00000525504 STAG1Q8WVM7 1258 aa7.05□□□□□ -1.28
CCDC90B-204ENST00000525504 FAM227BQ96M60 508 aa7.05□□□□□ -1.28
CCDC90B-204ENST00000525504 MMP19Q99542 508 aa7.05□□□□□ -1.28
CCDC90B-204ENST00000525504 INCENPQ9NQS7 918 aa7.05□□□□□ -1.28
CCDC90B-204ENST00000525504 TCP11L1Q9NUJ3 509 aa7.05□□□□□ -1.28
CCDC90B-204ENST00000525504 DOCK2Q92608 1830 aa7.05□□□□□ -1.28
CCDC90B-204ENST00000525504 LOC285556D6RIA3 1793 aa7.05□□□□□ -1.28
CCDC90B-204ENST00000525504 A0A0D9SFI3 127 aa7.04□□□□□ -1.28
CCDC90B-204ENST00000525504 SNAI1O95863 264 aaPredicted RBP7.04□□□□□ -1.28
CCDC90B-204ENST00000525504 PGK2P07205 417 aa7.04□□□□□ -1.28
CCDC90B-204ENST00000525504 HSPD1P10809 573 aaKnown RBP7.04□□□□□ -1.28
CCDC90B-204ENST00000525504 PCP11498 1178 aaKnown RBP7.04□□□□□ -1.28
CCDC90B-204ENST00000525504 BMP3P12645 472 aa7.04□□□□□ -1.28
CCDC90B-204ENST00000525504 NT5C2P49902 561 aa7.04□□□□□ -1.28
CCDC90B-204ENST00000525504 NKX3-2P78367 333 aa7.04□□□□□ -1.28
CCDC90B-204ENST00000525504 TMEM132AQ24JP5 1023 aa7.04□□□□□ -1.28
CCDC90B-204ENST00000525504 TUSC1Q2TAM9 212 aa7.04□□□□□ -1.28
CCDC90B-204ENST00000525504 RCSD1Q6JBY9 416 aa7.04□□□□□ -1.28
CCDC90B-204ENST00000525504 BTNL9Q6UXG8 535 aa7.04□□□□□ -1.28
CCDC90B-204ENST00000525504 FAM160B2Q86V87 743 aa7.04□□□□□ -1.28
CCDC90B-204ENST00000525504 STK11IPQ8N1F8 1099 aa7.04□□□□□ -1.28
CCDC90B-204ENST00000525504 CHST13Q8NET6 341 aa7.04□□□□□ -1.28
CCDC90B-204ENST00000525504 EXOC6Q8TAG9 804 aa7.04□□□□□ -1.28
CCDC90B-204ENST00000525504 CHURC1Q8WUH1 139 aa7.04□□□□□ -1.28
CCDC90B-204ENST00000525504 TTC14Q96N46 770 aa7.04□□□□□ -1.28
CCDC90B-204ENST00000525504 LNPKQ9C0E8 428 aa7.04□□□□□ -1.28
CCDC90B-204ENST00000525504 SENP6Q9GZR1 1112 aaPredicted RBP7.04□□□□□ -1.28
CCDC90B-204ENST00000525504 LIMD1Q9UGP4 676 aa7.04□□□□□ -1.28
CCDC90B-204ENST00000525504 FBXO40Q9UH90 709 aa7.04□□□□□ -1.28
CCDC90B-204ENST00000525504 MAST2Q6P0Q8 1798 aa7.04□□□□□ -1.28
CCDC90B-204ENST00000525504 ZSWIM8A7E2V4 1837 aa7.04□□□□□ -1.28
CCDC90B-204ENST00000525504 ZNF536O15090 1300 aa7.03□□□□□ -1.28
CCDC90B-204ENST00000525504 ZMYM6O95789 1325 aa7.03□□□□□ -1.28
CCDC90B-204ENST00000525504 SYNGAP1Q96PV0 1343 aa7.03□□□□□ -1.28
CCDC90B-204ENST00000525504 RBBP6Q7Z6E9 1792 aaKnown RBP7.03□□□□□ -1.28
CCDC90B-204ENST00000525504 A0A0C4DFX4 3053 aa7.03□□□□□ -1.28
CCDC90B-204ENST00000525504 TMEM232C9JQI7 657 aa7.03□□□□□ -1.28
CCDC90B-204ENST00000525504 TAL1P17542 331 aaPredicted RBP7.03□□□□□ -1.28
Retrieved 100 of 20,778 RNA–protein pairs in 17.9 ms