RNA–Protein interactions for RNA: ENST00000525469.1

CD44-218, Transcript of CD44 molecule (Indian blood group), humanhuman

TSL 3

Gene CD44, Length 705 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CD44-218ENST00000525469 CWC15Q9P013 229 aaKnown RBP5.91□□□□□ -1.46
CD44-218ENST00000525469 CGNQ9P2M7 1197 aaKnown RBP5.91□□□□□ -1.46
CD44-218ENST00000525469 MYBBP1AQ9BQG0 1328 aaKnown RBP5.91□□□□□ -1.46
CD44-218ENST00000525469 ARAP2Q8WZ64 1704 aa5.91□□□□□ -1.46
CD44-218ENST00000525469 TCP10L2B9ZVM9 353 aa5.9□□□□□ -1.46
CD44-218ENST00000525469 TULP2O00295 520 aa5.9□□□□□ -1.46
CD44-218ENST00000525469 PPATQ06203 517 aa5.9□□□□□ -1.46
CD44-218ENST00000525469 EHHADHQ08426 723 aa5.9□□□□□ -1.46
CD44-218ENST00000525469 GRIK4Q16099 956 aa5.9□□□□□ -1.46
CD44-218ENST00000525469 FAM184AQ8NB25 1140 aa5.9□□□□□ -1.46
CD44-218ENST00000525469 PPM1EQ8WY54 764 aa5.9□□□□□ -1.46
CD44-218ENST00000525469 PMEPA1Q969W9 287 aa5.9□□□□□ -1.46
CD44-218ENST00000525469 LENG1Q96BZ8 264 aaPredicted RBP5.9□□□□□ -1.46
CD44-218ENST00000525469 TMEM39BQ9GZU3 492 aa5.9□□□□□ -1.46
CD44-218ENST00000525469 ANKRD2Q9GZV1 360 aa5.9□□□□□ -1.46
CD44-218ENST00000525469 TDRD3Q9H7E2 651 aaKnown RBP5.9□□□□□ -1.46
CD44-218ENST00000525469 BSDC1Q9NW68 430 aaPredicted RBP5.9□□□□□ -1.46
CD44-218ENST00000525469 ZNF70Q9UC06 446 aaPredicted RBP5.9□□□□□ -1.46
CD44-218ENST00000525469 MINPP1Q9UNW1 487 aa5.9□□□□□ -1.46
CD44-218ENST00000525469 PCDHAC2Q9Y5I4 1007 aa5.9□□□□□ -1.46
CD44-218ENST00000525469 SPTBN5Q9NRC6 3674 aaKnown RBP5.9□□□□□ -1.47
CD44-218ENST00000525469 COL2A1P02458 1487 aaPredicted RBP5.9□□□□□ -1.47
CD44-218ENST00000525469 LAMA2P24043 3122 aaKnown RBP5.89□□□□□ -1.47
CD44-218ENST00000525469 HMGCRP04035 888 aa5.89□□□□□ -1.47
CD44-218ENST00000525469 MZF1P28698 734 aaPredicted RBP5.89□□□□□ -1.47
CD44-218ENST00000525469 IGHMBP2P38935 993 aaKnown RBP5.89□□□□□ -1.47
CD44-218ENST00000525469 EIF1AXP47813 144 aaKnown RBP5.89□□□□□ -1.47
CD44-218ENST00000525469 MRPS5P82675 430 aaKnown RBP5.89□□□□□ -1.47
CD44-218ENST00000525469 SMAD3P84022 425 aaKnown RBP5.89□□□□□ -1.47
CD44-218ENST00000525469 DNM1Q05193 864 aaKnown RBP5.89□□□□□ -1.47
CD44-218ENST00000525469 KCNA1Q09470 495 aa5.89□□□□□ -1.47
CD44-218ENST00000525469 TRDNQ13061 729 aa5.89□□□□□ -1.47
CD44-218ENST00000525469 DCAF15Q66K64 600 aa5.89□□□□□ -1.47
CD44-218ENST00000525469 GDF6Q6KF10 455 aaPredicted RBP5.89□□□□□ -1.47
CD44-218ENST00000525469 TXNRD3Q86VQ6 643 aa5.89□□□□□ -1.47
CD44-218ENST00000525469 NCAPG2Q86XI2 1143 aa5.89□□□□□ -1.47
CD44-218ENST00000525469 FBXO11Q86XK2 927 aa5.89□□□□□ -1.47
CD44-218ENST00000525469 SMCR8Q8TEV9 937 aaPredicted RBP5.89□□□□□ -1.47
CD44-218ENST00000525469 EDEM1Q92611 657 aa5.89□□□□□ -1.47
CD44-218ENST00000525469 ZKSCAN4Q969J2 545 aaPredicted RBP5.89□□□□□ -1.47
CD44-218ENST00000525469 SNX21Q969T3 373 aa5.89□□□□□ -1.47
CD44-218ENST00000525469 SYAP1Q96A49 352 aaPredicted RBP5.89□□□□□ -1.47
CD44-218ENST00000525469 TBC1D32Q96NH3 1257 aa5.89□□□□□ -1.47
CD44-218ENST00000525469 ASB2Q96Q27 587 aa5.89□□□□□ -1.47
CD44-218ENST00000525469 PLCD4Q9BRC7 762 aa5.89□□□□□ -1.47
CD44-218ENST00000525469 PANK2Q9BZ23 570 aa5.89□□□□□ -1.47
CD44-218ENST00000525469 CD209Q9NNX6 404 aa5.89□□□□□ -1.47
CD44-218ENST00000525469 TMOD2Q9NZR1 351 aa5.89□□□□□ -1.47
CD44-218ENST00000525469 THEGQ9P2T0 379 aa5.89□□□□□ -1.47
CD44-218ENST00000525469 SNCAIPQ9Y6H5 919 aa5.89□□□□□ -1.47
CD44-218ENST00000525469 J3QW42 95 aa5.88□□□□□ -1.47
CD44-218ENST00000525469 PCCAP05165 728 aaPredicted RBP5.88□□□□□ -1.47
CD44-218ENST00000525469 CYP2C8P10632 490 aa5.88□□□□□ -1.47
CD44-218ENST00000525469 MPSTP25325 297 aa5.88□□□□□ -1.47
CD44-218ENST00000525469 FKBP1AP62942 108 aaKnown RBP5.88□□□□□ -1.47
CD44-218ENST00000525469 LMOD3Q0VAK6 560 aa5.88□□□□□ -1.47
CD44-218ENST00000525469 GPS2Q13227 327 aa5.88□□□□□ -1.47
CD44-218ENST00000525469 ADGRE1Q14246 886 aa5.88□□□□□ -1.47
CD44-218ENST00000525469 GRIK5Q16478 980 aa5.88□□□□□ -1.47
CD44-218ENST00000525469 UVSSAQ2YD98 709 aa5.88□□□□□ -1.47
CD44-218ENST00000525469 TEX35Q5T0J7 233 aa5.88□□□□□ -1.47
CD44-218ENST00000525469 FAM117BQ6P1L5 589 aa5.88□□□□□ -1.47
CD44-218ENST00000525469 IGF2-ASQ6U949 168 aa5.88□□□□□ -1.47
CD44-218ENST00000525469 XKR5Q6UX68 686 aa5.88□□□□□ -1.47
CD44-218ENST00000525469 ZNF804AQ7Z570 1209 aa5.88□□□□□ -1.47
CD44-218ENST00000525469 TEPSINQ96N21 525 aa5.88□□□□□ -1.47
CD44-218ENST00000525469 MPHOSPH8Q99549 860 aa5.88□□□□□ -1.47
CD44-218ENST00000525469 P2RX7Q99572 595 aaKnown RBP5.88□□□□□ -1.47
CD44-218ENST00000525469 TTYH1Q9H313 450 aaPredicted RBP5.88□□□□□ -1.47
CD44-218ENST00000525469 RAI14Q9P0K7 980 aa5.88□□□□□ -1.47
CD44-218ENST00000525469 CHPF2Q9P2E5 772 aa5.88□□□□□ -1.47
CD44-218ENST00000525469 OGDHLQ9ULD0 1010 aa5.88□□□□□ -1.47
CD44-218ENST00000525469 KIF16BQ96L93 1317 aa5.88□□□□□ -1.47
CD44-218ENST00000525469 PIEZO1Q92508 2521 aa5.88□□□□□ -1.47
CD44-218ENST00000525469 MUC6Q6W4X9 2439 aa5.87□□□□□ -1.47
CD44-218ENST00000525469 ZBTB39O15060 712 aa5.87□□□□□ -1.47
CD44-218ENST00000525469 KIF4AO95239 1232 aa5.87□□□□□ -1.47
CD44-218ENST00000525469 ABL1P00519 1130 aa5.87□□□□□ -1.47
CD44-218ENST00000525469 PDGFAP04085 211 aa5.87□□□□□ -1.47
CD44-218ENST00000525469 FURINP09958 794 aa5.87□□□□□ -1.47
CD44-218ENST00000525469 DOC2BQ14184 412 aa5.87□□□□□ -1.47
CD44-218ENST00000525469 MBTPS1Q14703 1052 aa5.87□□□□□ -1.47
CD44-218ENST00000525469 RABEP1Q15276 862 aa5.87□□□□□ -1.47
CD44-218ENST00000525469 SHHQ15465 462 aa5.87□□□□□ -1.47
CD44-218ENST00000525469 LRRC26Q2I0M4 334 aa5.87□□□□□ -1.47
CD44-218ENST00000525469 FAM26DQ5JW98 314 aa5.87□□□□□ -1.47
CD44-218ENST00000525469 TMEM31Q5JXX7 168 aa5.87□□□□□ -1.47
CD44-218ENST00000525469 FASTKD5Q7L8L6 764 aaKnown RBP5.87□□□□□ -1.47
CD44-218ENST00000525469 ATCAYQ86WG3 371 aa5.87□□□□□ -1.47
CD44-218ENST00000525469 DHX37Q8IY37 1157 aaKnown RBP5.87□□□□□ -1.47
CD44-218ENST00000525469 DZIP1LQ8IYY4 767 aaKnown RBP5.87□□□□□ -1.47
CD44-218ENST00000525469 CERS5Q8N5B7 392 aa5.87□□□□□ -1.47
CD44-218ENST00000525469 IL22RA1Q8N6P7 574 aa5.87□□□□□ -1.47
CD44-218ENST00000525469 USP38Q8NB14 1042 aa5.87□□□□□ -1.47
CD44-218ENST00000525469 CCDC191Q8NCU4 936 aa5.87□□□□□ -1.47
CD44-218ENST00000525469 JARID2Q92833 1246 aaPredicted RBP5.87□□□□□ -1.47
CD44-218ENST00000525469 MYD88Q99836 296 aa5.87□□□□□ -1.47
CD44-218ENST00000525469 NCAPGQ9BPX3 1015 aa5.87□□□□□ -1.47
CD44-218ENST00000525469 LRFN3Q9BTN0 628 aa5.87□□□□□ -1.47
CD44-218ENST00000525469 ZNF341Q9BYN7 854 aa5.87□□□□□ -1.47
Retrieved 100 of 20,778 RNA–protein pairs in 16.1 ms