RNA–Protein interactions for RNA: ENST00000525435.1

CCS-202, Transcript of copper chaperone for superoxide dismutase, humanhuman

TSL 2

Gene CCS, Length 798 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCS-202ENST00000525435 ICAM3P32942 547 aa14.15□□□□□ -0.14
CCS-202ENST00000525435 SREBF1P36956 1147 aa14.15□□□□□ -0.14
CCS-202ENST00000525435 CUL4AQ13619 759 aa14.15□□□□□ -0.14
CCS-202ENST00000525435 TRIM29Q14134 588 aa14.15□□□□□ -0.14
CCS-202ENST00000525435 DUSP28Q4G0W2 176 aa14.15□□□□□ -0.14
CCS-202ENST00000525435 EEPD1Q7L9B9 569 aa14.15□□□□□ -0.14
CCS-202ENST00000525435 FBXO16Q8IX29 292 aaPredicted RBP14.15□□□□□ -0.14
CCS-202ENST00000525435 BLIDQ8IZY5 108 aa14.15□□□□□ -0.14
CCS-202ENST00000525435 FAM184AQ8NB25 1140 aa14.15□□□□□ -0.14
CCS-202ENST00000525435 SHISA4Q96DD7 197 aa14.15□□□□□ -0.14
CCS-202ENST00000525435 INTS4Q96HW7 963 aaKnown RBP14.15□□□□□ -0.14
CCS-202ENST00000525435 CDHR1Q96JP9 859 aa14.15□□□□□ -0.14
CCS-202ENST00000525435 INPP4AQ96PE3 977 aaPredicted RBP14.15□□□□□ -0.14
CCS-202ENST00000525435 WDR11Q9BZH6 1224 aa14.15□□□□□ -0.14
CCS-202ENST00000525435 SPC25Q9HBM1 224 aa14.15□□□□□ -0.14
CCS-202ENST00000525435 GNEQ9Y223 722 aaKnown RBP14.15□□□□□ -0.14
CCS-202ENST00000525435 POTEFA5A3E0 1075 aa14.14□□□□□ -0.15
CCS-202ENST00000525435 M0R2N6 131 aa14.14□□□□□ -0.15
CCS-202ENST00000525435 USP11P51784 963 aa14.14□□□□□ -0.15
CCS-202ENST00000525435 MRPS9P82933 396 aaKnown RBP14.14□□□□□ -0.15
CCS-202ENST00000525435 NPY5RQ15761 445 aa14.14□□□□□ -0.15
CCS-202ENST00000525435 CCDC62Q6P9F0 684 aa14.14□□□□□ -0.15
CCS-202ENST00000525435 NLRX1Q86UT6 975 aa14.14□□□□□ -0.15
CCS-202ENST00000525435 CRYGNQ8WXF5 182 aa14.14□□□□□ -0.15
CCS-202ENST00000525435 ANO3Q9BYT9 981 aa14.14□□□□□ -0.15
CCS-202ENST00000525435 BRMS1Q9HCU9 246 aa14.14□□□□□ -0.15
CCS-202ENST00000525435 PDGFCQ9NRA1 345 aa14.14□□□□□ -0.15
CCS-202ENST00000525435 SPATA31C2B4DYI2 1134 aa14.13□□□□□ -0.15
CCS-202ENST00000525435 K7ELQ4 463 aaPredicted RBP14.13□□□□□ -0.15
CCS-202ENST00000525435 TXNP10599 105 aaKnown RBP14.13□□□□□ -0.15
CCS-202ENST00000525435 SMPD1P17405 629 aa14.13□□□□□ -0.15
CCS-202ENST00000525435 ADCYAP1R1P41586 468 aa14.13□□□□□ -0.15
CCS-202ENST00000525435 GJA9P57773 515 aa14.13□□□□□ -0.15
CCS-202ENST00000525435 ARHGAP4P98171 946 aa14.13□□□□□ -0.15
CCS-202ENST00000525435 SAFBQ15424 915 aaKnown RBP eCLIP14.13□□□□□ -0.15
CCS-202ENST00000525435 JAKMIP3Q5VZ66 844 aa14.13□□□□□ -0.15
CCS-202ENST00000525435 SEPT14Q6ZU15 432 aa14.13□□□□□ -0.15
CCS-202ENST00000525435 NIPA1Q7RTP0 329 aa14.13□□□□□ -0.15
CCS-202ENST00000525435 KRT25Q7Z3Z0 450 aa14.13□□□□□ -0.15
CCS-202ENST00000525435 RNF180Q86T96 592 aa14.13□□□□□ -0.15
CCS-202ENST00000525435 FBXO18Q8NFZ0 1043 aa14.13□□□□□ -0.15
CCS-202ENST00000525435 IL31RAQ8NI17 732 aa14.13□□□□□ -0.15
CCS-202ENST00000525435 GPRASP2Q96D09 838 aa14.13□□□□□ -0.15
CCS-202ENST00000525435 C8orf76Q96K31 380 aa14.13□□□□□ -0.15
CCS-202ENST00000525435 SENP7Q9BQF6 1050 aa14.13□□□□□ -0.15
CCS-202ENST00000525435 TSEN34Q9BSV6 310 aaKnown RBP14.13□□□□□ -0.15
CCS-202ENST00000525435 AP5M1Q9H0R1 490 aa14.13□□□□□ -0.15
CCS-202ENST00000525435 UPF3AQ9H1J1 476 aaKnown RBP14.13□□□□□ -0.15
CCS-202ENST00000525435 XPNPEP3Q9NQH7 507 aa14.13□□□□□ -0.15
CCS-202ENST00000525435 DDX41Q9UJV9 622 aaKnown RBP14.13□□□□□ -0.15
CCS-202ENST00000525435 UBIAD1Q9Y5Z9 338 aa14.13□□□□□ -0.15
CCS-202ENST00000525435 PLXNA1Q9UIW2 1896 aa14.12□□□□□ -0.15
CCS-202ENST00000525435 DNM1LO00429 736 aa14.12□□□□□ -0.15
CCS-202ENST00000525435 FIBPO43427 364 aa14.12□□□□□ -0.15
CCS-202ENST00000525435 RGS20O76081 388 aa14.12□□□□□ -0.15
CCS-202ENST00000525435 MMP1P03956 469 aa14.12□□□□□ -0.15
CCS-202ENST00000525435 EN2P19622 333 aaPredicted RBP14.12□□□□□ -0.15
CCS-202ENST00000525435 CST5P28325 142 aaPredicted RBP14.12□□□□□ -0.15
CCS-202ENST00000525435 CIITAP33076 1130 aa14.12□□□□□ -0.15
CCS-202ENST00000525435 CEP55Q53EZ4 464 aa14.12□□□□□ -0.15
CCS-202ENST00000525435 KRT40Q6A162 431 aa14.12□□□□□ -0.15
CCS-202ENST00000525435 GIMAP8Q8ND71 665 aaPredicted RBP14.12□□□□□ -0.15
CCS-202ENST00000525435 KLHDC9Q8NEP7 349 aa14.12□□□□□ -0.15
CCS-202ENST00000525435 EMID1Q96A84 441 aaPredicted RBP14.12□□□□□ -0.15
CCS-202ENST00000525435 JADE2Q9NQC1 790 aa14.12□□□□□ -0.15
CCS-202ENST00000525435 TMEM260Q9NX78 707 aa14.12□□□□□ -0.15
CCS-202ENST00000525435 KCNJ14Q9UNX9 436 aa14.12□□□□□ -0.15
CCS-202ENST00000525435 SMC3Q9UQE7 1217 aa14.12□□□□□ -0.15
CCS-202ENST00000525435 MRVI1Q9Y6F6 885 aa14.12□□□□□ -0.15
CCS-202ENST00000525435 DDX49Q9Y6V7 483 aaKnown RBP14.12□□□□□ -0.15
CCS-202ENST00000525435 MEIS1O00470 390 aa14.11□□□□□ -0.15
CCS-202ENST00000525435 ADAMTS4O75173 837 aa14.11□□□□□ -0.15
CCS-202ENST00000525435 ITGB5P18084 799 aa14.11□□□□□ -0.15
CCS-202ENST00000525435 KRT2P35908 639 aa14.11□□□□□ -0.15
CCS-202ENST00000525435 LAMC2Q13753 1193 aa14.11□□□□□ -0.15
CCS-202ENST00000525435 NEDD9Q14511 834 aa14.11□□□□□ -0.15
CCS-202ENST00000525435 BRDTQ58F21 947 aaPredicted RBP14.11□□□□□ -0.15
CCS-202ENST00000525435 HSCBQ8IWL3 235 aa14.11□□□□□ -0.15
CCS-202ENST00000525435 PCSK9Q8NBP7 692 aaKnown RBP14.11□□□□□ -0.15
CCS-202ENST00000525435 MXRA8Q9BRK3 442 aa14.11□□□□□ -0.15
CCS-202ENST00000525435 RTEL1Q9NZ71 1219 aa14.11□□□□□ -0.15
CCS-202ENST00000525435 CYP3A7-CYP3A51PA0A087WV96 503 aa14.1□□□□□ -0.15
CCS-202ENST00000525435 CCDC194A0A1B0GVG4 234 aa14.1□□□□□ -0.15
CCS-202ENST00000525435 C11orf97A0A1B0GVM6 126 aaPredicted RBP14.1□□□□□ -0.15
CCS-202ENST00000525435 DYNC1LI2O43237 492 aaPredicted RBP14.1□□□□□ -0.15
CCS-202ENST00000525435 ADCY6O43306 1168 aa14.1□□□□□ -0.15
CCS-202ENST00000525435 ZEB2O60315 1214 aa14.1□□□□□ -0.15
CCS-202ENST00000525435 KPNA6O60684 536 aa14.1□□□□□ -0.15
CCS-202ENST00000525435 GH1P01241 217 aa14.1□□□□□ -0.15
CCS-202ENST00000525435 PDIA4P13667 645 aaKnown RBP14.1□□□□□ -0.15
CCS-202ENST00000525435 PDCP20941 246 aa14.1□□□□□ -0.15
CCS-202ENST00000525435 CYP3A7P24462 503 aa14.1□□□□□ -0.15
CCS-202ENST00000525435 ZNF76P36508 570 aa14.1□□□□□ -0.15
CCS-202ENST00000525435 SOX10P56693 466 aa14.1□□□□□ -0.15
CCS-202ENST00000525435 MLLT1Q03111 559 aaPredicted RBP14.1□□□□□ -0.15
CCS-202ENST00000525435 NONOQ15233 471 aaKnown RBP eCLIP14.1□□□□□ -0.15
CCS-202ENST00000525435 LRRC41Q15345 812 aa14.1□□□□□ -0.15
CCS-202ENST00000525435 MOXD1Q6UVY6 613 aa14.1□□□□□ -0.15
CCS-202ENST00000525435 UBE2Q1Q7Z7E8 422 aa14.1□□□□□ -0.15
CCS-202ENST00000525435 TLK2Q86UE8 772 aa14.1□□□□□ -0.15
Retrieved 100 of 20,778 RNA–protein pairs in 166.8 ms