RNA–Protein interactions for RNA: ENST00000525334.5

TSPAN4-215, Transcript of tetraspanin 4, humanhuman

TSL 3

Gene TSPAN4, Length 860 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TSPAN4-215ENST00000525334 DCDC2CA8MYV0 355 aa21.33■■□□□ 1.01
TSPAN4-215ENST00000525334 FAAP100Q0VG06 881 aa21.33■■□□□ 1.01
TSPAN4-215ENST00000525334 LY6KQ17RY6 165 aa21.33■■□□□ 1.01
TSPAN4-215ENST00000525334 USP17L6PQ6QN14 398 aa21.33■■□□□ 1.01
TSPAN4-215ENST00000525334 VSIG10LQ86VR7 867 aa21.33■■□□□ 1.01
TSPAN4-215ENST00000525334 FBXL16Q8N461 479 aa21.33■■□□□ 1.01
TSPAN4-215ENST00000525334 SMARCC2Q8TAQ2 1214 aa21.33■■□□□ 1.01
TSPAN4-215ENST00000525334 GPKOWQ92917 476 aaPredicted RBP eCLIP21.33■■□□□ 1.01
TSPAN4-215ENST00000525334 CUL5Q93034 780 aa21.33■■□□□ 1.01
TSPAN4-215ENST00000525334 AGXT2Q9BYV1 514 aa21.33■■□□□ 1.01
TSPAN4-215ENST00000525334 LAMA3Q16787 3333 aa21.33■■□□□ 1
TSPAN4-215ENST00000525334 PIK3CDO00329 1044 aa21.32■■□□□ 1
TSPAN4-215ENST00000525334 MEIS2O14770 477 aa21.32■■□□□ 1
TSPAN4-215ENST00000525334 RGS20O76081 388 aa21.32■■□□□ 1
TSPAN4-215ENST00000525334 CCND2P30279 289 aa21.32■■□□□ 1
TSPAN4-215ENST00000525334 METAP2P50579 478 aaKnown RBP eCLIP21.32■■□□□ 1
TSPAN4-215ENST00000525334 HEATR3Q7Z4Q2 680 aa21.32■■□□□ 1
TSPAN4-215ENST00000525334 TDHQ8IZJ6 230 aa21.32■■□□□ 1
TSPAN4-215ENST00000525334 ZSWIM6Q9HCJ5 1215 aa21.32■■□□□ 1
TSPAN4-215ENST00000525334 POLR3EQ9NVU0 708 aa21.32■■□□□ 1
TSPAN4-215ENST00000525334 DDX41Q9UJV9 622 aaKnown RBP21.32■■□□□ 1
TSPAN4-215ENST00000525334 MRVI1Q9Y6F6 885 aa21.32■■□□□ 1
TSPAN4-215ENST00000525334 GRIN2DO15399 1336 aa21.31■■□□□ 1
TSPAN4-215ENST00000525334 A6NJR5 290 aa21.31■■□□□ 1
TSPAN4-215ENST00000525334 SOX1O00570 391 aaPredicted RBP21.31■■□□□ 1
TSPAN4-215ENST00000525334 KIAA0355O15063 1070 aa21.31■■□□□ 1
TSPAN4-215ENST00000525334 GH1P01241 217 aa21.31■■□□□ 1
TSPAN4-215ENST00000525334 MYL3P08590 195 aa21.31■■□□□ 1
TSPAN4-215ENST00000525334 PSMC6P62333 389 aa21.31■■□□□ 1
TSPAN4-215ENST00000525334 PURAQ00577 322 aaKnown RBP21.31■■□□□ 1
TSPAN4-215ENST00000525334 ARHGAP1Q07960 439 aa21.31■■□□□ 1
TSPAN4-215ENST00000525334 ITGA7Q13683 1181 aa21.31■■□□□ 1
TSPAN4-215ENST00000525334 BRDTQ58F21 947 aaPredicted RBP21.31■■□□□ 1
TSPAN4-215ENST00000525334 WWC2Q6AWC2 1192 aa21.31■■□□□ 1
TSPAN4-215ENST00000525334 RUFY3Q7L099 469 aa21.31■■□□□ 1
TSPAN4-215ENST00000525334 SLC43A3Q8NBI5 491 aa21.31■■□□□ 1
TSPAN4-215ENST00000525334 ZFP91Q96JP5 570 aaPredicted RBP21.31■■□□□ 1
TSPAN4-215ENST00000525334 PSTPIP2Q9H939 334 aa21.31■■□□□ 1
TSPAN4-215ENST00000525334 TMEM39AQ9NV64 488 aa21.31■■□□□ 1
TSPAN4-215ENST00000525334 NID2Q14112 1375 aa21.31■■□□□ 1
TSPAN4-215ENST00000525334 ITGB8P26012 769 aa21.3■■□□□ 1
TSPAN4-215ENST00000525334 ADD1P35611 737 aaKnown RBP21.3■■□□□ 1
TSPAN4-215ENST00000525334 LRIT3Q3SXY7 679 aa21.3■■□□□ 1
TSPAN4-215ENST00000525334 FAM126BQ8IXS8 530 aa21.3■■□□□ 1
TSPAN4-215ENST00000525334 BADQ92934 168 aa21.3■■□□□ 1
TSPAN4-215ENST00000525334 V9GY48 417 aaPredicted RBP21.3■■□□□ 1
TSPAN4-215ENST00000525334 CCDC196A0A1B0GTZ2 297 aa21.29■■□□□ 1
TSPAN4-215ENST00000525334 AFG1LQ8WV93 481 aa21.29■■□□□ 1
TSPAN4-215ENST00000525334 MTG1Q9BT17 334 aaPredicted RBP21.29■■□□□ 1
TSPAN4-215ENST00000525334 TM6SF1Q9BZW5 370 aa21.29■■□□□ 1
TSPAN4-215ENST00000525334 TBX21Q9UL17 535 aa21.29■■□□□ 1
TSPAN4-215ENST00000525334 CYP46A1Q9Y6A2 500 aa21.29■■□□□ 1
TSPAN4-215ENST00000525334 MMP3P08254 477 aa21.28■■□□□ 1
TSPAN4-215ENST00000525334 MRPS9P82933 396 aaKnown RBP21.28■■□□□ 1
TSPAN4-215ENST00000525334 TOB2Q14106 344 aaPredicted RBP21.28■■□□□ 1
TSPAN4-215ENST00000525334 UBE2SQ16763 222 aa21.28■■□□□ 1
TSPAN4-215ENST00000525334 TYW1BQ6NUM6 668 aa21.28■■□□□ 1
TSPAN4-215ENST00000525334 UPF3BQ9BZI7 483 aaKnown RBP21.28■■□□□ 1
TSPAN4-215ENST00000525334 TLR3O15455 904 aaKnown RBP21.27■■□□□ 1
TSPAN4-215ENST00000525334 KPNA6O60684 536 aa21.27■■□□□ 1
TSPAN4-215ENST00000525334 CD4P01730 458 aa21.27■■□□□ 1
TSPAN4-215ENST00000525334 RAG1P15918 1043 aa21.27■■□□□ 1
TSPAN4-215ENST00000525334 NAPAP54920 295 aa21.27■■□□□ 1
TSPAN4-215ENST00000525334 EVCP57679 992 aa21.27■■□□□ 1
TSPAN4-215ENST00000525334 PPP1R18Q6NYC8 613 aa21.27■■□□□ 1
TSPAN4-215ENST00000525334 KCNV1Q6PIU1 500 aa21.27■■□□□ 1
TSPAN4-215ENST00000525334 EMID1Q96A84 441 aaPredicted RBP21.27■■□□□ 1
TSPAN4-215ENST00000525334 LRCH3Q96II8 777 aa21.27■■□□□ 1
TSPAN4-215ENST00000525334 SEZ6LQ9BYH1 1024 aa21.27■■□□□ 1
TSPAN4-215ENST00000525334 SCN10AQ9Y5Y9 1956 aa21.27■□□□□ 0.99
TSPAN4-215ENST00000525334 hCG_1984214I3L0E3 225 aa21.26■□□□□ 0.99
TSPAN4-215ENST00000525334 STXBP3O00186 592 aa21.26■□□□□ 0.99
TSPAN4-215ENST00000525334 STAM2O75886 525 aa21.26■□□□□ 0.99
TSPAN4-215ENST00000525334 UBA1P22314 1058 aaKnown RBP21.26■□□□□ 0.99
TSPAN4-215ENST00000525334 PDIA3P30101 505 aaKnown RBP21.26■□□□□ 0.99
TSPAN4-215ENST00000525334 SP2Q02086 613 aa21.26■□□□□ 0.99
TSPAN4-215ENST00000525334 LAMC2Q13753 1193 aa21.26■□□□□ 0.99
TSPAN4-215ENST00000525334 PCNX4Q63HM2 1172 aa21.26■□□□□ 0.99
TSPAN4-215ENST00000525334 DHX37Q8IY37 1157 aaKnown RBP21.26■□□□□ 0.99
TSPAN4-215ENST00000525334 ZNF713Q8N859 430 aaPredicted RBP21.26■□□□□ 0.99
TSPAN4-215ENST00000525334 INPP4AQ96PE3 977 aaPredicted RBP21.26■□□□□ 0.99
TSPAN4-215ENST00000525334 BARHL2Q9NY43 387 aa21.26■□□□□ 0.99
TSPAN4-215ENST00000525334 RTEL1Q9NZ71 1219 aa21.26■□□□□ 0.99
TSPAN4-215ENST00000525334 SORBS3O60504 671 aa21.25■□□□□ 0.99
TSPAN4-215ENST00000525334 B4GALT4O60513 344 aa21.25■□□□□ 0.99
TSPAN4-215ENST00000525334 GGPS1O95749 300 aa21.25■□□□□ 0.99
TSPAN4-215ENST00000525334 TGFB3P10600 412 aa21.25■□□□□ 0.99
TSPAN4-215ENST00000525334 GNPTABQ3T906 1256 aa21.25■□□□□ 0.99
TSPAN4-215ENST00000525334 XRRA1Q6P2D8 792 aa21.25■□□□□ 0.99
TSPAN4-215ENST00000525334 TRPV6Q9H1D0 765 aa21.25■□□□□ 0.99
TSPAN4-215ENST00000525334 SPDYE3A6NKU9 549 aa21.24■□□□□ 0.99
TSPAN4-215ENST00000525334 TIMP1P01033 207 aa21.24■□□□□ 0.99
TSPAN4-215ENST00000525334 ICAM3P32942 547 aa21.24■□□□□ 0.99
TSPAN4-215ENST00000525334 SEMA3FQ13275 785 aa21.24■□□□□ 0.99
TSPAN4-215ENST00000525334 PFKFB3Q16875 520 aaPredicted RBP21.24■□□□□ 0.99
TSPAN4-215ENST00000525334 NBPF20Q3BBV1 942 aa21.24■□□□□ 0.99
TSPAN4-215ENST00000525334 CELF3Q5SZQ8 465 aaKnown RBP21.24■□□□□ 0.99
TSPAN4-215ENST00000525334 MYSM1Q5VVJ2 828 aa21.24■□□□□ 0.99
TSPAN4-215ENST00000525334 GPR153Q6NV75 609 aa21.24■□□□□ 0.99
TSPAN4-215ENST00000525334 PPTC7Q8NI37 304 aa21.24■□□□□ 0.99
Retrieved 100 of 20,778 RNA–protein pairs in 24.9 ms