RNA–Protein interactions for RNA: ENST00000525257.1

USP47-205, Transcript of ubiquitin specific peptidase 47, humanhuman

TSL 4

Gene USP47, Length 548 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP47-205ENST00000525257 CTAGE1Q96RT6 745 aa27.99■■■□□ 2.07
USP47-205ENST00000525257 ZSCAN10Q96SZ4 725 aaPredicted RBP27.99■■■□□ 2.07
USP47-205ENST00000525257 KIF28PB7ZC32 967 aa27.98■■■□□ 2.07
USP47-205ENST00000525257 BAIAP3O94812 1187 aa27.98■■■□□ 2.07
USP47-205ENST00000525257 ASPRV1Q53RT3 343 aa27.98■■■□□ 2.07
USP47-205ENST00000525257 MCF2L2Q86YR7 1114 aa27.98■■■□□ 2.07
USP47-205ENST00000525257 AFAP1L1Q8TED9 768 aa27.98■■■□□ 2.07
USP47-205ENST00000525257 KAT2BQ92831 832 aa27.98■■■□□ 2.07
USP47-205ENST00000525257 MAF1Q9H063 256 aa27.98■■■□□ 2.07
USP47-205ENST00000525257 VAT1LQ9HCJ6 419 aa27.98■■■□□ 2.07
USP47-205ENST00000525257 BMP1P13497 986 aa27.97■■■□□ 2.07
USP47-205ENST00000525257 EIF2AK2P19525 551 aaKnown RBP27.97■■■□□ 2.07
USP47-205ENST00000525257 POU3F3P20264 500 aaPredicted RBP27.97■■■□□ 2.07
USP47-205ENST00000525257 KCNJ6P48051 423 aa27.97■■■□□ 2.07
USP47-205ENST00000525257 KCNQ1P51787 676 aa27.97■■■□□ 2.07
USP47-205ENST00000525257 SESTD1Q86VW0 696 aa27.97■■■□□ 2.07
USP47-205ENST00000525257 FBXO11Q86XK2 927 aa27.97■■■□□ 2.07
USP47-205ENST00000525257 ENAHQ8N8S7 591 aaPredicted RBP27.97■■■□□ 2.07
USP47-205ENST00000525257 ANKS1AQ92625 1134 aa27.97■■■□□ 2.07
USP47-205ENST00000525257 IWS1Q96ST2 819 aa27.97■■■□□ 2.07
USP47-205ENST00000525257 DIAPH3Q9NSV4 1193 aa27.97■■■□□ 2.07
USP47-205ENST00000525257 MRPL11Q9Y3B7 192 aaKnown RBP27.97■■■□□ 2.07
USP47-205ENST00000525257 TLL1O43897 1013 aa27.96■■■□□ 2.07
USP47-205ENST00000525257 CASTP20810 708 aaKnown RBP27.96■■■□□ 2.07
USP47-205ENST00000525257 NT5C2P49902 561 aa27.96■■■□□ 2.07
USP47-205ENST00000525257 AAK1Q2M2I8 961 aa27.96■■■□□ 2.07
USP47-205ENST00000525257 ARHGEF16Q5VV41 709 aa27.96■■■□□ 2.07
USP47-205ENST00000525257 SPRED2Q7Z698 418 aa27.96■■■□□ 2.07
USP47-205ENST00000525257 DHX38Q92620 1227 aaKnown RBP27.96■■■□□ 2.07
USP47-205ENST00000525257 JMJD4Q9H9V9 463 aa27.96■■■□□ 2.07
USP47-205ENST00000525257 RAPGEFL1Q9UHV5 662 aa27.96■■■□□ 2.07
USP47-205ENST00000525257 COL4A4P53420 1690 aaPredicted RBP27.96■■■□□ 2.07
USP47-205ENST00000525257 PARP1P09874 1014 aaKnown RBP27.95■■■□□ 2.06
USP47-205ENST00000525257 SELPP16109 830 aa27.95■■■□□ 2.06
USP47-205ENST00000525257 GPNMBQ14956 572 aa27.95■■■□□ 2.06
USP47-205ENST00000525257 DGKDQ16760 1214 aa27.95■■■□□ 2.06
USP47-205ENST00000525257 LRRC8DQ7L1W4 858 aa27.95■■■□□ 2.06
USP47-205ENST00000525257 TMCO2Q7Z6W1 182 aaPredicted RBP27.95■■■□□ 2.06
USP47-205ENST00000525257 PLEKHM2Q8IWE5 1019 aa27.95■■■□□ 2.06
USP47-205ENST00000525257 SMC5Q8IY18 1101 aa27.95■■■□□ 2.06
USP47-205ENST00000525257 ZSWIM5Q9P217 1185 aa27.95■■■□□ 2.06
USP47-205ENST00000525257 DDX41Q9UJV9 622 aaKnown RBP27.95■■■□□ 2.06
USP47-205ENST00000525257 CFBP00751 764 aa27.94■■■□□ 2.06
USP47-205ENST00000525257 WDR5P61964 334 aaKnown RBP27.94■■■□□ 2.06
USP47-205ENST00000525257 CHD1LQ86WJ1 897 aa27.94■■■□□ 2.06
USP47-205ENST00000525257 ALG1Q9BT22 464 aa27.94■■■□□ 2.06
USP47-205ENST00000525257 HDAC6Q9UBN7 1215 aa27.94■■■□□ 2.06
USP47-205ENST00000525257 GTF2IRD1Q9UHL9 959 aa27.94■■■□□ 2.06
USP47-205ENST00000525257 MRVI1Q9Y6F6 885 aa27.94■■■□□ 2.06
USP47-205ENST00000525257 LCHNA4D1U4 455 aa27.93■■■□□ 2.06
USP47-205ENST00000525257 PSEN2P49810 448 aa27.93■■■□□ 2.06
USP47-205ENST00000525257 GRB10Q13322 594 aa27.93■■■□□ 2.06
USP47-205ENST00000525257 C7orf31Q8N865 590 aa27.93■■■□□ 2.06
USP47-205ENST00000525257 PXMP2Q9NR77 195 aa27.93■■■□□ 2.06
USP47-205ENST00000525257 EIF3JO75822 258 aaKnown RBP27.92■■■□□ 2.06
USP47-205ENST00000525257 NR3C2P08235 984 aa27.92■■■□□ 2.06
USP47-205ENST00000525257 ZNF286BP0CG31 522 aa27.92■■■□□ 2.06
USP47-205ENST00000525257 DEFB103AP81534 67 aa27.92■■■□□ 2.06
USP47-205ENST00000525257 IMMTQ16891 758 aaKnown RBP27.92■■■□□ 2.06
USP47-205ENST00000525257 ZBED2Q9BTP6 218 aa27.92■■■□□ 2.06
USP47-205ENST00000525257 RWDD1Q9H446 243 aaPredicted RBP27.92■■■□□ 2.06
USP47-205ENST00000525257 OSBPL3Q9H4L5 887 aa27.92■■■□□ 2.06
USP47-205ENST00000525257 MYH7BA7E2Y1 1941 aa27.92■■■□□ 2.06
USP47-205ENST00000525257 RBAK-RBAKDNI3L0D1 243 aa27.91■■■□□ 2.06
USP47-205ENST00000525257 CKBP12277 381 aa27.91■■■□□ 2.06
USP47-205ENST00000525257 RBL2Q08999 1139 aa27.91■■■□□ 2.06
USP47-205ENST00000525257 CNKSR3Q6P9H4 555 aa27.91■■■□□ 2.06
USP47-205ENST00000525257 STAG2Q8N3U4 1231 aa27.91■■■□□ 2.06
USP47-205ENST00000525257 EMID1Q96A84 441 aaPredicted RBP27.91■■■□□ 2.06
USP47-205ENST00000525257 UBAC1Q9BSL1 405 aa27.91■■■□□ 2.06
USP47-205ENST00000525257 DSCC1Q9BVC3 393 aa27.91■■■□□ 2.06
USP47-205ENST00000525257 KATNAL1Q9BW62 490 aa27.91■■■□□ 2.06
USP47-205ENST00000525257 OPLAHO14841 1288 aa27.9■■■□□ 2.06
USP47-205ENST00000525257 NBNO60934 754 aa27.9■■■□□ 2.06
USP47-205ENST00000525257 LAMC2Q13753 1193 aa27.9■■■□□ 2.06
USP47-205ENST00000525257 MFSD10Q14728 455 aa27.9■■■□□ 2.06
USP47-205ENST00000525257 TCTN1Q2MV58 587 aa27.9■■■□□ 2.06
USP47-205ENST00000525257 DHX37Q8IY37 1157 aaKnown RBP27.9■■■□□ 2.06
USP47-205ENST00000525257 AMNQ9BXJ7 453 aa27.9■■■□□ 2.06
USP47-205ENST00000525257 KRT23Q9C075 422 aa27.9■■■□□ 2.06
USP47-205ENST00000525257 HIP1O00291 1037 aa27.89■■■□□ 2.06
USP47-205ENST00000525257 SORBS3O60504 671 aa27.89■■■□□ 2.06
USP47-205ENST00000525257 F2P00734 622 aa27.89■■■□□ 2.06
USP47-205ENST00000525257 CXCL10P02778 98 aa27.89■■■□□ 2.06
USP47-205ENST00000525257 HSD17B4P51659 736 aa27.89■■■□□ 2.06
USP47-205ENST00000525257 NUCB1Q02818 461 aa27.89■■■□□ 2.06
USP47-205ENST00000525257 KIAA0753Q2KHM9 967 aa27.89■■■□□ 2.06
USP47-205ENST00000525257 PPTC7Q8NI37 304 aa27.89■■■□□ 2.06
USP47-205ENST00000525257 COG5Q9UP83 839 aa27.89■■■□□ 2.06
USP47-205ENST00000525257 LPXNO60711 386 aa27.88■■■□□ 2.05
USP47-205ENST00000525257 PARNO95453 639 aaKnown RBP27.88■■■□□ 2.05
USP47-205ENST00000525257 MYCLP12524 364 aaPredicted RBP27.88■■■□□ 2.05
USP47-205ENST00000525257 IFIT1BQ5T764 474 aaKnown RBP27.88■■■□□ 2.05
USP47-205ENST00000525257 GDPD5Q8WTR4 605 aa27.88■■■□□ 2.05
USP47-205ENST00000525257 CNNM2Q9H8M5 875 aa27.88■■■□□ 2.05
USP47-205ENST00000525257 CTNNA3Q9UI47 895 aa27.88■■■□□ 2.05
USP47-205ENST00000525257 HAS3O00219 553 aa27.87■■■□□ 2.05
USP47-205ENST00000525257 PPP1R11O60927 126 aaPredicted RBP27.87■■■□□ 2.05
USP47-205ENST00000525257 IGHDP01880 384 aa27.87■■■□□ 2.05
USP47-205ENST00000525257 ZNF200P98182 395 aaPredicted RBP27.87■■■□□ 2.05
Retrieved 100 of 20,778 RNA–protein pairs in 23.9 ms