RNA–Protein interactions for RNA: ENST00000525132.1

CSDE1-209, Transcript of cold shock domain containing E1, humanhuman

TSL 5

Gene CSDE1, Length 521 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CSDE1-209ENST00000525132 CYP2W1Q8TAV3 490 aa4.5□□□□□ -1.69
CSDE1-209ENST00000525132 ZCRB1Q8TBF4 217 aaKnown RBP4.5□□□□□ -1.69
CSDE1-209ENST00000525132 PIGBQ92521 554 aa4.5□□□□□ -1.69
CSDE1-209ENST00000525132 KLHDC7BQ96G42 594 aa4.5□□□□□ -1.69
CSDE1-209ENST00000525132 CLEC4MQ9H2X3 399 aaPredicted RBP4.5□□□□□ -1.69
CSDE1-209ENST00000525132 SMOC2Q9H3U7 446 aa4.5□□□□□ -1.69
CSDE1-209ENST00000525132 SCAF8Q9UPN6 1271 aaKnown RBP4.5□□□□□ -1.69
CSDE1-209ENST00000525132 ANKRD31Q8N7Z5 1873 aa4.49□□□□□ -1.69
CSDE1-209ENST00000525132 NBEAL1Q6ZS30 2694 aa4.49□□□□□ -1.69
CSDE1-209ENST00000525132 ADGRA2Q96PE1 1338 aa4.49□□□□□ -1.69
CSDE1-209ENST00000525132 NBPF19A0A087WUL8 3843 aa4.49□□□□□ -1.69
CSDE1-209ENST00000525132 TMEM8BA6NDV4 472 aa4.49□□□□□ -1.69
CSDE1-209ENST00000525132 UNCXA6NJT0 531 aa4.49□□□□□ -1.69
CSDE1-209ENST00000525132 C9orf172C9J069 976 aa4.49□□□□□ -1.69
CSDE1-209ENST00000525132 SRGNP10124 158 aa4.49□□□□□ -1.69
CSDE1-209ENST00000525132 ERCC3P19447 782 aa4.49□□□□□ -1.69
CSDE1-209ENST00000525132 POU3F3P20264 500 aaPredicted RBP4.49□□□□□ -1.69
CSDE1-209ENST00000525132 NOS3P29474 1203 aa4.49□□□□□ -1.69
CSDE1-209ENST00000525132 PSMC4P43686 418 aa4.49□□□□□ -1.69
CSDE1-209ENST00000525132 CCDC6Q16204 474 aa4.49□□□□□ -1.69
CSDE1-209ENST00000525132 NKAPLQ5M9Q1 402 aa4.49□□□□□ -1.69
CSDE1-209ENST00000525132 ALG1LQ6GMV1 187 aa4.49□□□□□ -1.69
CSDE1-209ENST00000525132 TXNRD3Q86VQ6 643 aa4.49□□□□□ -1.69
CSDE1-209ENST00000525132 TMC1Q8TDI8 760 aa4.49□□□□□ -1.69
CSDE1-209ENST00000525132 ZCCHC14Q8WYQ9 949 aaKnown RBP4.49□□□□□ -1.69
CSDE1-209ENST00000525132 NACC1Q96RE7 527 aa4.49□□□□□ -1.69
CSDE1-209ENST00000525132 BCO2Q9BYV7 579 aa4.49□□□□□ -1.69
CSDE1-209ENST00000525132 SRCIN1Q9C0H9 1055 aa4.49□□□□□ -1.69
CSDE1-209ENST00000525132 NKX2-4Q9H2Z4 354 aa4.49□□□□□ -1.69
CSDE1-209ENST00000525132 ZNF768Q9H5H4 540 aaKnown RBP4.49□□□□□ -1.69
CSDE1-209ENST00000525132 SEC31BQ9NQW1 1179 aa4.49□□□□□ -1.69
CSDE1-209ENST00000525132 TRAK1Q9UPV9 953 aa4.49□□□□□ -1.69
CSDE1-209ENST00000525132 RBM47A0AV96 593 aaKnown RBP4.48□□□□□ -1.69
CSDE1-209ENST00000525132 DDX3YO15523 660 aaKnown RBP4.48□□□□□ -1.69
CSDE1-209ENST00000525132 PDGFBP01127 241 aaPredicted RBP4.48□□□□□ -1.69
CSDE1-209ENST00000525132 CTSBP07858 339 aa4.48□□□□□ -1.69
CSDE1-209ENST00000525132 HMGB1P09429 215 aaKnown RBP4.48□□□□□ -1.69
CSDE1-209ENST00000525132 GP1BBP13224 206 aa4.48□□□□□ -1.69
CSDE1-209ENST00000525132 NCLP19338 710 aaKnown RBP4.48□□□□□ -1.69
CSDE1-209ENST00000525132 KCNA5P22460 613 aa4.48□□□□□ -1.69
CSDE1-209ENST00000525132 HOXD10P28358 340 aa4.48□□□□□ -1.69
CSDE1-209ENST00000525132 GNA15P30679 374 aa4.48□□□□□ -1.69
CSDE1-209ENST00000525132 CD68P34810 354 aaPredicted RBP4.48□□□□□ -1.69
CSDE1-209ENST00000525132 RBMXP38159 391 aaKnown RBP4.48□□□□□ -1.69
CSDE1-209ENST00000525132 ZNF200P98182 395 aaPredicted RBP4.48□□□□□ -1.69
CSDE1-209ENST00000525132 TAGLNQ01995 201 aaKnown RBP4.48□□□□□ -1.69
CSDE1-209ENST00000525132 PRKCZQ05513 592 aa4.48□□□□□ -1.69
CSDE1-209ENST00000525132 PCDH1Q08174 1060 aa4.48□□□□□ -1.69
CSDE1-209ENST00000525132 TAF1CQ15572 869 aaPredicted RBP4.48□□□□□ -1.69
CSDE1-209ENST00000525132 NXPE4Q6UWF7 544 aa4.48□□□□□ -1.69
CSDE1-209ENST00000525132 NIM1KQ8IY84 436 aa4.48□□□□□ -1.69
CSDE1-209ENST00000525132 ZNF843Q8N446 348 aa4.48□□□□□ -1.69
CSDE1-209ENST00000525132 UBASH3BQ8TF42 649 aa4.48□□□□□ -1.69
CSDE1-209ENST00000525132 MASTLQ96GX5 879 aa4.48□□□□□ -1.69
CSDE1-209ENST00000525132 MEGF10Q96KG7 1140 aa4.48□□□□□ -1.69
CSDE1-209ENST00000525132 XRN2Q9H0D6 950 aaKnown RBP eCLIP4.48□□□□□ -1.699e-6■■□□□ 13.2
CSDE1-209ENST00000525132 MRPL18Q9H0U6 180 aaKnown RBP4.48□□□□□ -1.69
CSDE1-209ENST00000525132 EHD4Q9H223 541 aa4.48□□□□□ -1.69
CSDE1-209ENST00000525132 SLC28A3Q9HAS3 691 aa4.48□□□□□ -1.69
CSDE1-209ENST00000525132 ASAP1Q9ULH1 1129 aa4.48□□□□□ -1.69
CSDE1-209ENST00000525132 PCDHGC5Q9Y5F6 944 aa4.48□□□□□ -1.69
CSDE1-209ENST00000525132 XDHP47989 1333 aa4.47□□□□□ -1.69
CSDE1-209ENST00000525132 PPAN-P2RY11A0A0B4J1V8 794 aaPredicted RBP4.47□□□□□ -1.69
CSDE1-209ENST00000525132 LOC100289279A0A1B0GTE1 492 aa4.47□□□□□ -1.69
CSDE1-209ENST00000525132 MEGF11A6BM72 1044 aa4.47□□□□□ -1.69
CSDE1-209ENST00000525132 PRR5-ARHGAP8B1AHC4 643 aa4.47□□□□□ -1.69
CSDE1-209ENST00000525132 GIPC1O14908 333 aa4.47□□□□□ -1.69
CSDE1-209ENST00000525132 ADCY3O60266 1144 aa4.47□□□□□ -1.69
CSDE1-209ENST00000525132 TIAF1O95411 115 aa4.47□□□□□ -1.69
CSDE1-209ENST00000525132 LDHBP07195 334 aaKnown RBP4.47□□□□□ -1.69
CSDE1-209ENST00000525132 XRCC5P13010 732 aaKnown RBP4.47□□□□□ -1.69
CSDE1-209ENST00000525132 MAPK8P45983 427 aa4.47□□□□□ -1.69
CSDE1-209ENST00000525132 ARHGAP8P85298 464 aa4.47□□□□□ -1.69
CSDE1-209ENST00000525132 DAB2P98082 770 aa4.47□□□□□ -1.69
CSDE1-209ENST00000525132 ZXDAP98168 799 aa4.47□□□□□ -1.69
CSDE1-209ENST00000525132 NRG1Q02297 640 aaPredicted RBP4.47□□□□□ -1.69
CSDE1-209ENST00000525132 IKBKEQ14164 716 aa4.47□□□□□ -1.69
CSDE1-209ENST00000525132 DCAF11Q8TEB1 546 aa4.47□□□□□ -1.69
CSDE1-209ENST00000525132 WFDC12Q8WWY7 111 aa4.47□□□□□ -1.69
CSDE1-209ENST00000525132 ASIC4Q96FT7 647 aa4.47□□□□□ -1.69
CSDE1-209ENST00000525132 FRMD6Q96NE9 622 aa4.47□□□□□ -1.69
CSDE1-209ENST00000525132 PSMD1Q99460 953 aa4.47□□□□□ -1.69
CSDE1-209ENST00000525132 C12orf49Q9H741 205 aa4.47□□□□□ -1.69
CSDE1-209ENST00000525132 UBE2ZQ9H832 354 aaPredicted RBP4.47□□□□□ -1.69
CSDE1-209ENST00000525132 TPSG1Q9NRR2 321 aa4.47□□□□□ -1.69
CSDE1-209ENST00000525132 GABRQQ9UN88 632 aa4.47□□□□□ -1.69
CSDE1-209ENST00000525132 RALGAPA2Q2PPJ7 1873 aa4.47□□□□□ -1.69
CSDE1-209ENST00000525132 CDHR2Q9BYE9 1310 aa4.46□□□□□ -1.69
CSDE1-209ENST00000525132 RIC1Q4ADV7 1423 aa4.46□□□□□ -1.69
CSDE1-209ENST00000525132 FAM208AQ9UK61 1670 aaKnown RBP4.46□□□□□ -1.7
CSDE1-209ENST00000525132 RAD17O75943 681 aa4.46□□□□□ -1.7
CSDE1-209ENST00000525132 CTSHP09668 335 aa4.46□□□□□ -1.7
CSDE1-209ENST00000525132 MRPL58Q14197 206 aaKnown RBP4.46□□□□□ -1.7
CSDE1-209ENST00000525132 LDLRAD1Q5T700 205 aa4.46□□□□□ -1.7
CSDE1-209ENST00000525132 NFXL1Q6ZNB6 911 aa4.46□□□□□ -1.7
CSDE1-209ENST00000525132 TMEM105Q8N8V8 129 aa4.46□□□□□ -1.7
CSDE1-209ENST00000525132 ASAP3Q8TDY4 903 aa4.46□□□□□ -1.7
CSDE1-209ENST00000525132 FAM46AQ96IP4 442 aaKnown RBP4.46□□□□□ -1.7
CSDE1-209ENST00000525132 FAM84BQ96KN1 310 aaPredicted RBP4.46□□□□□ -1.7
CSDE1-209ENST00000525132 PRAM1Q96QH2 718 aa4.46□□□□□ -1.7
Retrieved 100 of 20,778 RNA–protein pairs in 198.8 ms