RNA–Protein interactions for RNA: ENST00000524652.1

CSDE1-208, Transcript of cold shock domain containing E1, humanhuman

TSL 4

Gene CSDE1, Length 562 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CSDE1-208ENST00000524652 NPHS1O60500 1241 aa4.68□□□□□ -1.66
CSDE1-208ENST00000524652 DLX2Q07687 328 aaPredicted RBP4.68□□□□□ -1.66
CSDE1-208ENST00000524652 NCAPHQ15003 741 aa4.68□□□□□ -1.66
CSDE1-208ENST00000524652 ZFYVE27Q5T4F4 411 aa4.68□□□□□ -1.66
CSDE1-208ENST00000524652 DCP2Q8IU60 420 aaKnown RBP4.68□□□□□ -1.66
CSDE1-208ENST00000524652 FAM169BQ8N8A8 192 aa4.68□□□□□ -1.66
CSDE1-208ENST00000524652 BVESQ8NE79 360 aa4.68□□□□□ -1.66
CSDE1-208ENST00000524652 MMP19Q99542 508 aa4.68□□□□□ -1.66
CSDE1-208ENST00000524652 EMC9Q9Y3B6 208 aa4.68□□□□□ -1.66
CSDE1-208ENST00000524652 FHOD3Q2V2M9 1422 aa4.68□□□□□ -1.66
CSDE1-208ENST00000524652 ABCA8O94911 1581 aa4.67□□□□□ -1.66
CSDE1-208ENST00000524652 PCF11O94913 1555 aaKnown RBP4.67□□□□□ -1.66
CSDE1-208ENST00000524652 SPATA31D1Q6ZQQ2 1576 aa4.67□□□□□ -1.66
CSDE1-208ENST00000524652 CEP162Q5TB80 1403 aa4.67□□□□□ -1.66
CSDE1-208ENST00000524652 PPP1R11O60927 126 aaPredicted RBP4.67□□□□□ -1.66
CSDE1-208ENST00000524652 KCNH1O95259 989 aa4.67□□□□□ -1.66
CSDE1-208ENST00000524652 RANGAP1P46060 587 aaPredicted RBP4.67□□□□□ -1.66
CSDE1-208ENST00000524652 CACNB2Q08289 660 aaPredicted RBP4.67□□□□□ -1.66
CSDE1-208ENST00000524652 SCRN1Q12765 414 aa4.67□□□□□ -1.66
CSDE1-208ENST00000524652 C9orf131Q5VYM1 1079 aa4.67□□□□□ -1.66
CSDE1-208ENST00000524652 SMARCC2Q8TAQ2 1214 aa4.67□□□□□ -1.66
CSDE1-208ENST00000524652 USP33Q8TEY7 942 aa4.67□□□□□ -1.66
CSDE1-208ENST00000524652 ZNF526Q8TF50 670 aaPredicted RBP4.67□□□□□ -1.66
CSDE1-208ENST00000524652 APBA2Q99767 749 aa4.67□□□□□ -1.66
CSDE1-208ENST00000524652 RXFP1Q9HBX9 757 aa4.67□□□□□ -1.66
CSDE1-208ENST00000524652 KIAA1522Q9P206 1035 aaPredicted RBP4.67□□□□□ -1.66
CSDE1-208ENST00000524652 CNOT11Q9UKZ1 510 aaKnown RBP4.67□□□□□ -1.66
CSDE1-208ENST00000524652 INPP5FQ9Y2H2 1132 aa4.67□□□□□ -1.66
CSDE1-208ENST00000524652 RAPGEF6Q8TEU7 1601 aa4.67□□□□□ -1.66
CSDE1-208ENST00000524652 ZCCHC11Q5TAX3 1644 aaKnown RBP4.66□□□□□ -1.66
CSDE1-208ENST00000524652 NOP56O00567 594 aaKnown RBP4.66□□□□□ -1.66
CSDE1-208ENST00000524652 PLS3P13797 630 aa4.66□□□□□ -1.66
CSDE1-208ENST00000524652 PRRT2Q7Z6L0 340 aaPredicted RBP4.66□□□□□ -1.66
CSDE1-208ENST00000524652 TRIM59Q8IWR1 403 aa4.66□□□□□ -1.66
CSDE1-208ENST00000524652 ADGRG2Q8IZP9 1017 aa4.66□□□□□ -1.66
CSDE1-208ENST00000524652 CARFQ8N187 725 aa4.66□□□□□ -1.66
CSDE1-208ENST00000524652 PLEKHO2Q8TD55 490 aa4.66□□□□□ -1.66
CSDE1-208ENST00000524652 BORCS6Q96GS4 357 aa4.66□□□□□ -1.66
CSDE1-208ENST00000524652 SPATA25Q9BR10 227 aa4.66□□□□□ -1.66
CSDE1-208ENST00000524652 KRTAP4-5Q9BYR2 181 aa4.66□□□□□ -1.66
CSDE1-208ENST00000524652 NKX2-4Q9H2Z4 354 aa4.66□□□□□ -1.66
CSDE1-208ENST00000524652 ACBD3Q9H3P7 528 aa4.66□□□□□ -1.66
CSDE1-208ENST00000524652 CCSER2Q9H7U1 834 aa4.66□□□□□ -1.66
CSDE1-208ENST00000524652 CYP26B1Q9NR63 512 aa4.66□□□□□ -1.66
CSDE1-208ENST00000524652 USP40Q9NVE5 1235 aa4.66□□□□□ -1.66
CSDE1-208ENST00000524652 NTMQ9P121 344 aa4.66□□□□□ -1.66
CSDE1-208ENST00000524652 CLEC1BQ9P126 229 aa4.66□□□□□ -1.66
CSDE1-208ENST00000524652 KIF13AQ9H1H9 1805 aa4.66□□□□□ -1.66
CSDE1-208ENST00000524652 PLB1Q6P1J6 1458 aa4.66□□□□□ -1.66
CSDE1-208ENST00000524652 CLIP1P30622 1438 aa4.65□□□□□ -1.66
CSDE1-208ENST00000524652 A0A1B0GTL3 188 aa4.65□□□□□ -1.67
CSDE1-208ENST00000524652 FUCA1P04066 466 aa4.65□□□□□ -1.67
CSDE1-208ENST00000524652 NTRK1P04629 796 aa4.65□□□□□ -1.67
CSDE1-208ENST00000524652 THBDP07204 575 aa4.65□□□□□ -1.67
CSDE1-208ENST00000524652 ADRB1P08588 477 aa4.65□□□□□ -1.67
CSDE1-208ENST00000524652 CYP2C8P10632 490 aa4.65□□□□□ -1.67
CSDE1-208ENST00000524652 ATF4P18848 351 aaPredicted RBP4.65□□□□□ -1.67
CSDE1-208ENST00000524652 SLC6A11P48066 632 aa4.65□□□□□ -1.67
CSDE1-208ENST00000524652 EFEMP1Q12805 493 aa4.65□□□□□ -1.67
CSDE1-208ENST00000524652 RTP5Q14D33 572 aa4.65□□□□□ -1.67
CSDE1-208ENST00000524652 NT5DC1Q5TFE4 455 aa4.65□□□□□ -1.67
CSDE1-208ENST00000524652 MBLAC2Q68D91 279 aa4.65□□□□□ -1.67
CSDE1-208ENST00000524652 GTF2IRD2BQ6EKJ0 949 aa4.65□□□□□ -1.67
CSDE1-208ENST00000524652 DBX2Q6ZNG2 339 aa4.65□□□□□ -1.67
CSDE1-208ENST00000524652 GTF2IRD2Q86UP8 949 aa4.65□□□□□ -1.67
CSDE1-208ENST00000524652 LINC00482Q8N8I6 264 aa4.65□□□□□ -1.67
CSDE1-208ENST00000524652 ANAPC16Q96DE5 110 aa4.65□□□□□ -1.67
CSDE1-208ENST00000524652 MRGPRX3Q96LB0 322 aa4.65□□□□□ -1.67
CSDE1-208ENST00000524652 BDH2Q9BUT1 245 aa4.65□□□□□ -1.67
CSDE1-208ENST00000524652 AP5M1Q9H0R1 490 aa4.65□□□□□ -1.67
CSDE1-208ENST00000524652 BCAS3Q9H6U6 928 aa4.65□□□□□ -1.67
CSDE1-208ENST00000524652 PCDH18Q9HCL0 1135 aa4.65□□□□□ -1.67
CSDE1-208ENST00000524652 MARCH2Q9P0N8 246 aa4.65□□□□□ -1.67
CSDE1-208ENST00000524652 ABCC2Q92887 1545 aa4.65□□□□□ -1.67
CSDE1-208ENST00000524652 PRICKLE3O43900 615 aaPredicted RBP4.64□□□□□ -1.67
CSDE1-208ENST00000524652 PLP2Q04941 152 aa4.64□□□□□ -1.67
CSDE1-208ENST00000524652 SPATS1Q496A3 300 aa4.64□□□□□ -1.67
CSDE1-208ENST00000524652 TNNI3KQ59H18 835 aa4.64□□□□□ -1.67
CSDE1-208ENST00000524652 E4F1Q66K89 784 aaPredicted RBP4.64□□□□□ -1.67
CSDE1-208ENST00000524652 IQCEQ6IPM2 695 aa4.64□□□□□ -1.67
CSDE1-208ENST00000524652 ETV3LQ6ZN32 361 aa4.64□□□□□ -1.67
CSDE1-208ENST00000524652 MIB1Q86YT6 1006 aa4.64□□□□□ -1.67
CSDE1-208ENST00000524652 RIOX2Q8IUF8 465 aa4.64□□□□□ -1.67
CSDE1-208ENST00000524652 Q8N1Y9 231 aa4.64□□□□□ -1.67
CSDE1-208ENST00000524652 ZBTB8AQ96BR9 441 aa4.64□□□□□ -1.67
CSDE1-208ENST00000524652 GPRC5CQ9NQ84 441 aa4.64□□□□□ -1.67
CSDE1-208ENST00000524652 JAG2Q9Y219 1238 aa4.64□□□□□ -1.67
CSDE1-208ENST00000524652 TTBK1Q5TCY1 1321 aaPredicted RBP4.64□□□□□ -1.67
CSDE1-208ENST00000524652 CFAP43Q8NDM7 1665 aa4.64□□□□□ -1.67
CSDE1-208ENST00000524652 NUP153P49790 1475 aaKnown RBP4.63□□□□□ -1.67
CSDE1-208ENST00000524652 UNCXA6NJT0 531 aa4.63□□□□□ -1.67
CSDE1-208ENST00000524652 NOBOXO60393 691 aa4.63□□□□□ -1.67
CSDE1-208ENST00000524652 GTF2A2P52657 109 aa4.63□□□□□ -1.67
CSDE1-208ENST00000524652 GJA9P57773 515 aa4.63□□□□□ -1.67
CSDE1-208ENST00000524652 KRTAP10-2P60368 255 aa4.63□□□□□ -1.67
CSDE1-208ENST00000524652 NFKB2Q00653 900 aa4.63□□□□□ -1.67
CSDE1-208ENST00000524652 UBXN11Q5T124 520 aa4.63□□□□□ -1.67
CSDE1-208ENST00000524652 MROH9Q5TGP6 573 aa4.63□□□□□ -1.67
CSDE1-208ENST00000524652 TTLL7Q6ZT98 887 aa4.63□□□□□ -1.67
CSDE1-208ENST00000524652 NPLOC4Q8TAT6 608 aa4.63□□□□□ -1.67
Retrieved 100 of 20,778 RNA–protein pairs in 24.3 ms