RNA–Protein interactions for RNA: ENST00000524162.5

TRAPPC9-215, Transcript of trafficking protein particle complex 9, humanhuman

TSL 4

Gene TRAPPC9, Length 591 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAPPC9-215ENST00000524162 ZNF274Q96GC6 653 aaPredicted RBP24.05■■□□□ 1.44
TRAPPC9-215ENST00000524162 PRKAG2Q9UGJ0 569 aa24.05■■□□□ 1.44
TRAPPC9-215ENST00000524162 COLQQ9Y215 455 aaPredicted RBP24.05■■□□□ 1.44
TRAPPC9-215ENST00000524162 ARVCFO00192 962 aa24.04■■□□□ 1.44
TRAPPC9-215ENST00000524162 IRX5P78411 483 aaPredicted RBP24.04■■□□□ 1.44
TRAPPC9-215ENST00000524162 BEX3Q00994 111 aa24.04■■□□□ 1.44
TRAPPC9-215ENST00000524162 TLE2Q04725 743 aa24.04■■□□□ 1.44
TRAPPC9-215ENST00000524162 TOB2Q14106 344 aaPredicted RBP24.04■■□□□ 1.44
TRAPPC9-215ENST00000524162 TMEM63BQ5T3F8 832 aa24.04■■□□□ 1.44
TRAPPC9-215ENST00000524162 FCHSD1Q86WN1 690 aa24.04■■□□□ 1.44
TRAPPC9-215ENST00000524162 OR6J1Q8NGC5 347 aa24.04■■□□□ 1.44
TRAPPC9-215ENST00000524162 SMARCC2Q8TAQ2 1214 aa24.04■■□□□ 1.44
TRAPPC9-215ENST00000524162 DDX41Q9UJV9 622 aaKnown RBP24.04■■□□□ 1.44
TRAPPC9-215ENST00000524162 V9GY48 417 aaPredicted RBP24.04■■□□□ 1.44
TRAPPC9-215ENST00000524162 RGS20O76081 388 aa24.03■■□□□ 1.44
TRAPPC9-215ENST00000524162 ARIH2O95376 493 aa24.03■■□□□ 1.44
TRAPPC9-215ENST00000524162 GH1P01241 217 aa24.03■■□□□ 1.44
TRAPPC9-215ENST00000524162 PDIA3P30101 505 aaKnown RBP24.03■■□□□ 1.44
TRAPPC9-215ENST00000524162 ADD1P35611 737 aaKnown RBP24.03■■□□□ 1.44
TRAPPC9-215ENST00000524162 PCNX4Q63HM2 1172 aa24.03■■□□□ 1.44
TRAPPC9-215ENST00000524162 CHRDL2Q6WN34 429 aa24.03■■□□□ 1.44
TRAPPC9-215ENST00000524162 SEPT14Q6ZU15 432 aa24.03■■□□□ 1.44
TRAPPC9-215ENST00000524162 INPP4AQ96PE3 977 aaPredicted RBP24.03■■□□□ 1.44
TRAPPC9-215ENST00000524162 BARHL2Q9NY43 387 aa24.03■■□□□ 1.44
TRAPPC9-215ENST00000524162 ZMYND8Q9ULU4 1186 aaPredicted RBP24.03■■□□□ 1.44
TRAPPC9-215ENST00000524162 DCDC2CA8MYV0 355 aa24.02■■□□□ 1.44
TRAPPC9-215ENST00000524162 KIAA0355O15063 1070 aa24.02■■□□□ 1.44
TRAPPC9-215ENST00000524162 ICAM3P32942 547 aa24.02■■□□□ 1.44
TRAPPC9-215ENST00000524162 PURAQ00577 322 aaKnown RBP24.02■■□□□ 1.44
TRAPPC9-215ENST00000524162 PFKFB3Q16875 520 aaPredicted RBP24.02■■□□□ 1.44
TRAPPC9-215ENST00000524162 GNPTABQ3T906 1256 aa24.02■■□□□ 1.44
TRAPPC9-215ENST00000524162 HABP4Q5JVS0 413 aaKnown RBP24.02■■□□□ 1.44
TRAPPC9-215ENST00000524162 WWC2Q6AWC2 1192 aa24.02■■□□□ 1.44
TRAPPC9-215ENST00000524162 USP17L6PQ6QN14 398 aa24.02■■□□□ 1.44
TRAPPC9-215ENST00000524162 CXCL17Q6UXB2 119 aa24.02■■□□□ 1.44
TRAPPC9-215ENST00000524162 HEATR3Q7Z4Q2 680 aa24.02■■□□□ 1.44
TRAPPC9-215ENST00000524162 PDLIM7Q9NR12 457 aa24.02■■□□□ 1.44
TRAPPC9-215ENST00000524162 PRPF3O43395 683 aaKnown RBP24.01■■□□□ 1.43
TRAPPC9-215ENST00000524162 CLTBP09497 229 aa24.01■■□□□ 1.43
TRAPPC9-215ENST00000524162 IFNAR1P17181 557 aa24.01■■□□□ 1.43
TRAPPC9-215ENST00000524162 ARHGAP1Q07960 439 aa24.01■■□□□ 1.43
TRAPPC9-215ENST00000524162 LAMC2Q13753 1193 aa24.01■■□□□ 1.43
TRAPPC9-215ENST00000524162 NTRK3Q16288 839 aa24.01■■□□□ 1.43
TRAPPC9-215ENST00000524162 RNF26Q9BY78 433 aaPredicted RBP24.01■■□□□ 1.43
TRAPPC9-215ENST00000524162 RIC8AQ9NPQ8 531 aa24.01■■□□□ 1.43
TRAPPC9-215ENST00000524162 MRVI1Q9Y6F6 885 aa24.01■■□□□ 1.43
TRAPPC9-215ENST00000524162 LAMA3Q16787 3333 aa24.01■■□□□ 1.43
TRAPPC9-215ENST00000524162 hCG_1642624A0A1W2PR95 340 aa24■■□□□ 1.43
TRAPPC9-215ENST00000524162 ESYT2A0FGR8 921 aa24■■□□□ 1.43
TRAPPC9-215ENST00000524162 FOSP01100 380 aaPredicted RBP24■■□□□ 1.43
TRAPPC9-215ENST00000524162 MYCLP12524 364 aaPredicted RBP24■■□□□ 1.43
TRAPPC9-215ENST00000524162 SYN1P17600 705 aa24■■□□□ 1.43
TRAPPC9-215ENST00000524162 MRPS9P82933 396 aaKnown RBP24■■□□□ 1.43
TRAPPC9-215ENST00000524162 MCTP2Q6DN12 878 aa24■■□□□ 1.43
TRAPPC9-215ENST00000524162 IL31RAQ8NI17 732 aa24■■□□□ 1.43
TRAPPC9-215ENST00000524162 MTG1Q9BT17 334 aaPredicted RBP24■■□□□ 1.43
TRAPPC9-215ENST00000524162 NAP1L2Q9ULW6 460 aaPredicted RBP24■■□□□ 1.43
TRAPPC9-215ENST00000524162 STXBP3O00186 592 aa23.99■■□□□ 1.43
TRAPPC9-215ENST00000524162 HOXD8P13378 290 aaPredicted RBP23.99■■□□□ 1.43
TRAPPC9-215ENST00000524162 SCG2P13521 617 aa23.99■■□□□ 1.43
TRAPPC9-215ENST00000524162 MAGEA10P43363 369 aaPredicted RBP23.99■■□□□ 1.43
TRAPPC9-215ENST00000524162 NAPAP54920 295 aa23.99■■□□□ 1.43
TRAPPC9-215ENST00000524162 FAAP100Q0VG06 881 aa23.99■■□□□ 1.43
TRAPPC9-215ENST00000524162 ITGA7Q13683 1181 aa23.99■■□□□ 1.43
TRAPPC9-215ENST00000524162 LY6KQ17RY6 165 aa23.99■■□□□ 1.43
TRAPPC9-215ENST00000524162 FAM126BQ8IXS8 530 aa23.99■■□□□ 1.43
TRAPPC9-215ENST00000524162 FAM177A1Q8N128 213 aaPredicted RBP23.99■■□□□ 1.43
TRAPPC9-215ENST00000524162 CCDC12Q8WUD4 166 aaPredicted RBP23.99■■□□□ 1.43
TRAPPC9-215ENST00000524162 GPKOWQ92917 476 aaPredicted RBP eCLIP23.99■■□□□ 1.43
TRAPPC9-215ENST00000524162 VTI1AQ96AJ9 217 aa23.99■■□□□ 1.43
TRAPPC9-215ENST00000524162 LBHD1Q9BQE6 289 aaPredicted RBP23.99■■□□□ 1.43
TRAPPC9-215ENST00000524162 UPF3BQ9BZI7 483 aaKnown RBP23.99■■□□□ 1.43
TRAPPC9-215ENST00000524162 EHMT1Q9H9B1 1298 aa23.99■■□□□ 1.43
TRAPPC9-215ENST00000524162 PDRG1Q9NUG6 133 aa23.99■■□□□ 1.43
TRAPPC9-215ENST00000524162 SPDYE3A6NKU9 549 aa23.98■■□□□ 1.43
TRAPPC9-215ENST00000524162 PQBP1O60828 265 aaKnown RBP23.98■■□□□ 1.43
TRAPPC9-215ENST00000524162 CD4P01730 458 aa23.98■■□□□ 1.43
TRAPPC9-215ENST00000524162 PTGS1P23219 599 aa23.98■■□□□ 1.43
TRAPPC9-215ENST00000524162 MYSM1Q5VVJ2 828 aa23.98■■□□□ 1.43
TRAPPC9-215ENST00000524162 TYW1BQ6NUM6 668 aa23.98■■□□□ 1.43
TRAPPC9-215ENST00000524162 PPTC7Q8NI37 304 aa23.98■■□□□ 1.43
TRAPPC9-215ENST00000524162 COPS5Q92905 334 aa23.98■■□□□ 1.43
TRAPPC9-215ENST00000524162 SENP7Q9BQF6 1050 aa23.98■■□□□ 1.43
TRAPPC9-215ENST00000524162 TBX21Q9UL17 535 aa23.98■■□□□ 1.43
TRAPPC9-215ENST00000524162 GRIN2DO15399 1336 aa23.98■■□□□ 1.43
TRAPPC9-215ENST00000524162 SPATA31C2B4DYI2 1134 aa23.97■■□□□ 1.43
TRAPPC9-215ENST00000524162 TLR3O15455 904 aaKnown RBP23.97■■□□□ 1.43
TRAPPC9-215ENST00000524162 MAFGO15525 162 aa23.97■■□□□ 1.43
TRAPPC9-215ENST00000524162 FIBPO43427 364 aa23.97■■□□□ 1.43
TRAPPC9-215ENST00000524162 PTPN11Q06124 597 aaPredicted RBP23.97■■□□□ 1.43
TRAPPC9-215ENST00000524162 AP3B2Q13367 1082 aa23.97■■□□□ 1.43
TRAPPC9-215ENST00000524162 ANKRD1Q15327 319 aa23.97■■□□□ 1.43
TRAPPC9-215ENST00000524162 NFRKBQ6P4R8 1299 aa23.97■■□□□ 1.43
TRAPPC9-215ENST00000524162 CDHR1Q96JP9 859 aa23.97■■□□□ 1.43
TRAPPC9-215ENST00000524162 ZMYND12Q9H0C1 365 aa23.97■■□□□ 1.43
TRAPPC9-215ENST00000524162 TRIM43BA6NCK2 446 aa23.96■■□□□ 1.43
TRAPPC9-215ENST00000524162 PPFIA4O75335 1185 aa23.96■■□□□ 1.43
TRAPPC9-215ENST00000524162 MMP3P08254 477 aa23.96■■□□□ 1.43
TRAPPC9-215ENST00000524162 CLK2P49760 499 aaKnown RBP23.96■■□□□ 1.43
TRAPPC9-215ENST00000524162 ADCY7P51828 1080 aa23.96■■□□□ 1.43
Retrieved 100 of 20,778 RNA–protein pairs in 32.8 ms