RNA–Protein interactions for RNA: ENST00000523990.1

FBXO28-205, Transcript of F-box protein 28, humanhuman

TSL 2

Gene FBXO28, Length 1,415 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
FBXO28-205ENST00000523990 POLR3EQ9NVU0 708 aa22.08■■□□□ 1.13
FBXO28-205ENST00000523990 NID2Q14112 1375 aa22.08■■□□□ 1.12
FBXO28-205ENST00000523990 A6NJR5 290 aa22.07■■□□□ 1.12
FBXO28-205ENST00000523990 GOLGA8AA7E2F4 631 aa22.07■■□□□ 1.12
FBXO28-205ENST00000523990 GOLGA8BA8MQT2 603 aa22.07■■□□□ 1.12
FBXO28-205ENST00000523990 PIK3CDO00329 1044 aa22.07■■□□□ 1.12
FBXO28-205ENST00000523990 RGS20O76081 388 aa22.07■■□□□ 1.12
FBXO28-205ENST00000523990 MYCLP12524 364 aaPredicted RBP22.07■■□□□ 1.12
FBXO28-205ENST00000523990 RPS6KB1P23443 525 aa22.07■■□□□ 1.12
FBXO28-205ENST00000523990 FGD1P98174 961 aa22.07■■□□□ 1.12
FBXO28-205ENST00000523990 ARHGAP1Q07960 439 aa22.07■■□□□ 1.12
FBXO28-205ENST00000523990 FUT2Q10981 343 aa22.07■■□□□ 1.12
FBXO28-205ENST00000523990 ITGA7Q13683 1181 aa22.07■■□□□ 1.12
FBXO28-205ENST00000523990 LY6KQ17RY6 165 aa22.07■■□□□ 1.12
FBXO28-205ENST00000523990 VSIG10LQ86VR7 867 aa22.07■■□□□ 1.12
FBXO28-205ENST00000523990 FBXL16Q8N461 479 aa22.07■■□□□ 1.12
FBXO28-205ENST00000523990 BADQ92934 168 aa22.07■■□□□ 1.12
FBXO28-205ENST00000523990 USP26Q9BXU7 913 aa22.07■■□□□ 1.12
FBXO28-205ENST00000523990 AGXT2Q9BYV1 514 aa22.07■■□□□ 1.12
FBXO28-205ENST00000523990 TMEM39AQ9NV64 488 aa22.07■■□□□ 1.12
FBXO28-205ENST00000523990 TBX21Q9UL17 535 aa22.07■■□□□ 1.12
FBXO28-205ENST00000523990 CDH23Q9H251 3354 aa22.07■■□□□ 1.12
FBXO28-205ENST00000523990 MEIS2O14770 477 aa22.06■■□□□ 1.12
FBXO28-205ENST00000523990 CASTP20810 708 aaKnown RBP22.06■■□□□ 1.12
FBXO28-205ENST00000523990 CCND2P30279 289 aa22.06■■□□□ 1.12
FBXO28-205ENST00000523990 PSMC6P62333 389 aa22.06■■□□□ 1.12
FBXO28-205ENST00000523990 APOBRQ0VD83 1088 aa22.06■■□□□ 1.12
FBXO28-205ENST00000523990 BRDTQ58F21 947 aaPredicted RBP22.06■■□□□ 1.12
FBXO28-205ENST00000523990 USP17L6PQ6QN14 398 aa22.06■■□□□ 1.12
FBXO28-205ENST00000523990 BRF1Q92994 677 aa22.06■■□□□ 1.12
FBXO28-205ENST00000523990 FAM217BQ9NTX9 383 aaPredicted RBP22.06■■□□□ 1.12
FBXO28-205ENST00000523990 DDX41Q9UJV9 622 aaKnown RBP22.06■■□□□ 1.12
FBXO28-205ENST00000523990 MRVI1Q9Y6F6 885 aa22.06■■□□□ 1.12
FBXO28-205ENST00000523990 GH1P01241 217 aa22.06■■□□□ 1.12
FBXO28-205ENST00000523990 CD4P01730 458 aa22.06■■□□□ 1.12
FBXO28-205ENST00000523990 MYL3P08590 195 aa22.06■■□□□ 1.12
FBXO28-205ENST00000523990 PSMA5P28066 241 aa22.06■■□□□ 1.12
FBXO28-205ENST00000523990 CDC27P30260 824 aa22.06■■□□□ 1.12
FBXO28-205ENST00000523990 SEZ6LQ9BYH1 1024 aa22.06■■□□□ 1.12
FBXO28-205ENST00000523990 RAG1P15918 1043 aa22.05■■□□□ 1.12
FBXO28-205ENST00000523990 SMARCC2Q8TAQ2 1214 aa22.05■■□□□ 1.12
FBXO28-205ENST00000523990 GPKOWQ92917 476 aaPredicted RBP eCLIP22.05■■□□□ 1.12
FBXO28-205ENST00000523990 CUL5Q93034 780 aa22.05■■□□□ 1.12
FBXO28-205ENST00000523990 MTG1Q9BT17 334 aaPredicted RBP22.05■■□□□ 1.12
FBXO28-205ENST00000523990 TANC1Q9C0D5 1861 aa22.04■■□□□ 1.12
FBXO28-205ENST00000523990 SOX1O00570 391 aaPredicted RBP22.04■■□□□ 1.12
FBXO28-205ENST00000523990 TLR3O15455 904 aaKnown RBP22.04■■□□□ 1.12
FBXO28-205ENST00000523990 MMP3P08254 477 aa22.04■■□□□ 1.12
FBXO28-205ENST00000523990 METAP2P50579 478 aaKnown RBP eCLIP22.04■■□□□ 1.12
FBXO28-205ENST00000523990 MRPS9P82933 396 aaKnown RBP22.04■■□□□ 1.12
FBXO28-205ENST00000523990 WWC2Q6AWC2 1192 aa22.04■■□□□ 1.12
FBXO28-205ENST00000523990 HEATR3Q7Z4Q2 680 aa22.04■■□□□ 1.12
FBXO28-205ENST00000523990 AFG1LQ8WV93 481 aa22.04■■□□□ 1.12
FBXO28-205ENST00000523990 EMID1Q96A84 441 aaPredicted RBP22.04■■□□□ 1.12
FBXO28-205ENST00000523990 NAP1L2Q9ULW6 460 aaPredicted RBP22.04■■□□□ 1.12
FBXO28-205ENST00000523990 KPNA6O60684 536 aa22.03■■□□□ 1.12
FBXO28-205ENST00000523990 LRIT3Q3SXY7 679 aa22.03■■□□□ 1.12
FBXO28-205ENST00000523990 KCNV1Q6PIU1 500 aa22.03■■□□□ 1.12
FBXO28-205ENST00000523990 ZFP91Q96JP5 570 aaPredicted RBP22.03■■□□□ 1.12
FBXO28-205ENST00000523990 PSTPIP2Q9H939 334 aa22.03■■□□□ 1.12
FBXO28-205ENST00000523990 COL6A3P12111 3177 aa22.02■■□□□ 1.12
FBXO28-205ENST00000523990 STAM2O75886 525 aa22.02■■□□□ 1.12
FBXO28-205ENST00000523990 TIMP1P01033 207 aa22.02■■□□□ 1.12
FBXO28-205ENST00000523990 TYW1BQ6NUM6 668 aa22.02■■□□□ 1.12
FBXO28-205ENST00000523990 RUFY3Q7L099 469 aa22.02■■□□□ 1.12
FBXO28-205ENST00000523990 ZSWIM6Q9HCJ5 1215 aa22.02■■□□□ 1.12
FBXO28-205ENST00000523990 B4GALT4O60513 344 aa22.01■■□□□ 1.11
FBXO28-205ENST00000523990 UBA1P22314 1058 aaKnown RBP22.01■■□□□ 1.11
FBXO28-205ENST00000523990 ADD1P35611 737 aaKnown RBP22.01■■□□□ 1.11
FBXO28-205ENST00000523990 UBE2SQ16763 222 aa22.01■■□□□ 1.11
FBXO28-205ENST00000523990 PPP1R18Q6NYC8 613 aa22.01■■□□□ 1.11
FBXO28-205ENST00000523990 INPP4AQ96PE3 977 aaPredicted RBP22.01■■□□□ 1.11
FBXO28-205ENST00000523990 ALDH8A1Q9H2A2 487 aaPredicted RBP22.01■■□□□ 1.11
FBXO28-205ENST00000523990 CCDC196A0A1B0GTZ2 297 aa22■■□□□ 1.11
FBXO28-205ENST00000523990 hCG_1984214I3L0E3 225 aa22■■□□□ 1.11
FBXO28-205ENST00000523990 TGFB3P10600 412 aa22■■□□□ 1.11
FBXO28-205ENST00000523990 EVCP57679 992 aa22■■□□□ 1.11
FBXO28-205ENST00000523990 SP2Q02086 613 aa22■■□□□ 1.11
FBXO28-205ENST00000523990 LAMC2Q13753 1193 aa22■■□□□ 1.11
FBXO28-205ENST00000523990 GNPTABQ3T906 1256 aa22■■□□□ 1.11
FBXO28-205ENST00000523990 PCNX4Q63HM2 1172 aa22■■□□□ 1.11
FBXO28-205ENST00000523990 ZNF713Q8N859 430 aaPredicted RBP22■■□□□ 1.11
FBXO28-205ENST00000523990 PPTC7Q8NI37 304 aa22■■□□□ 1.11
FBXO28-205ENST00000523990 LRCH3Q96II8 777 aa22■■□□□ 1.11
FBXO28-205ENST00000523990 TM6SF1Q9BZW5 370 aa22■■□□□ 1.11
FBXO28-205ENST00000523990 TRPV6Q9H1D0 765 aa22■■□□□ 1.11
FBXO28-205ENST00000523990 V9GY48 417 aaPredicted RBP22■■□□□ 1.11
FBXO28-205ENST00000523990 STXBP3O00186 592 aa21.99■■□□□ 1.11
FBXO28-205ENST00000523990 NAPAP54920 295 aa21.99■■□□□ 1.11
FBXO28-205ENST00000523990 TOB2Q14106 344 aaPredicted RBP21.99■■□□□ 1.11
FBXO28-205ENST00000523990 NBPF20Q3BBV1 942 aa21.99■■□□□ 1.11
FBXO28-205ENST00000523990 C9orf50Q5SZB4 431 aa21.99■■□□□ 1.11
FBXO28-205ENST00000523990 CELF3Q5SZQ8 465 aaKnown RBP21.99■■□□□ 1.11
FBXO28-205ENST00000523990 MYSM1Q5VVJ2 828 aa21.99■■□□□ 1.11
FBXO28-205ENST00000523990 MFSD5Q6N075 450 aa21.99■■□□□ 1.11
FBXO28-205ENST00000523990 DHX37Q8IY37 1157 aaKnown RBP21.99■■□□□ 1.11
FBXO28-205ENST00000523990 CYP46A1Q9Y6A2 500 aa21.99■■□□□ 1.11
FBXO28-205ENST00000523990 GGPS1O95749 300 aa21.98■■□□□ 1.11
FBXO28-205ENST00000523990 HOXD8P13378 290 aaPredicted RBP21.98■■□□□ 1.11
FBXO28-205ENST00000523990 ICAM3P32942 547 aa21.98■■□□□ 1.11
Retrieved 100 of 20,778 RNA–protein pairs in 15.1 ms