RNA–Protein interactions for RNA: ENST00000523877.1

SDC2-208, Transcript of syndecan 2, humanhuman

TSL 5

Gene SDC2, Length 621 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SDC2-208ENST00000523877 CATSPER2Q96P56 530 aa7.21□□□□□ -1.26
SDC2-208ENST00000523877 CCT7Q99832 543 aa7.21□□□□□ -1.26
SDC2-208ENST00000523877 KATNAL1Q9BW62 490 aa7.21□□□□□ -1.26
SDC2-208ENST00000523877 EDEM3Q9BZQ6 932 aa7.21□□□□□ -1.26
SDC2-208ENST00000523877 FOXP3Q9BZS1 431 aa7.21□□□□□ -1.26
SDC2-208ENST00000523877 C8orf33Q9H7E9 229 aaPredicted RBP7.21□□□□□ -1.26
SDC2-208ENST00000523877 DNAJC18Q9H819 358 aa7.21□□□□□ -1.26
SDC2-208ENST00000523877 WBP1LQ9NX94 342 aa7.21□□□□□ -1.26
SDC2-208ENST00000523877 EMC3Q9P0I2 261 aa7.21□□□□□ -1.26
SDC2-208ENST00000523877 SCHIP1Q9P0W5 487 aaPredicted RBP7.21□□□□□ -1.26
SDC2-208ENST00000523877 CNTN3Q9P232 1028 aa7.21□□□□□ -1.26
SDC2-208ENST00000523877 ZNF624Q9P2J8 865 aaPredicted RBP7.21□□□□□ -1.26
SDC2-208ENST00000523877 SH3BGRL2Q9UJC5 107 aa7.21□□□□□ -1.26
SDC2-208ENST00000523877 AGO2Q9UKV8 859 aaKnown RBP7.21□□□□□ -1.26
SDC2-208ENST00000523877 ADAMTS8Q9UP79 889 aa7.21□□□□□ -1.26
SDC2-208ENST00000523877 SCAF8Q9UPN6 1271 aaKnown RBP7.21□□□□□ -1.26
SDC2-208ENST00000523877 ZNF148Q9UQR1 794 aa7.21□□□□□ -1.26
SDC2-208ENST00000523877 DGKBQ9Y6T7 804 aa7.21□□□□□ -1.26
SDC2-208ENST00000523877 AQRO60306 1485 aaKnown RBP eCLIP7.21□□□□□ -1.263e-6■■■■■ 30
SDC2-208ENST00000523877 MAGI1Q96QZ7 1491 aaPredicted RBP7.21□□□□□ -1.26
SDC2-208ENST00000523877 ZNF804BA4D1E1 1349 aa7.21□□□□□ -1.26
SDC2-208ENST00000523877 CCDC171Q6TFL3 1326 aa7.21□□□□□ -1.26
SDC2-208ENST00000523877 RPAP1Q9BWH6 1393 aaPredicted RBP7.2□□□□□ -1.26
SDC2-208ENST00000523877 CYP2D7A0A087X1C5 515 aa7.2□□□□□ -1.26
SDC2-208ENST00000523877 PI4K2BG5E9Z4 385 aa7.2□□□□□ -1.26
SDC2-208ENST00000523877 J3KRW8 73 aa7.2□□□□□ -1.26
SDC2-208ENST00000523877 GPR37O15354 613 aa7.2□□□□□ -1.26
SDC2-208ENST00000523877 XPOTO43592 962 aaKnown RBP7.2□□□□□ -1.26
SDC2-208ENST00000523877 STX6O43752 255 aa7.2□□□□□ -1.26
SDC2-208ENST00000523877 EXTL3O43909 919 aa7.2□□□□□ -1.26
SDC2-208ENST00000523877 ZEB2O60315 1214 aa7.2□□□□□ -1.26
SDC2-208ENST00000523877 CNOT4O95628 575 aaKnown RBP7.2□□□□□ -1.26
SDC2-208ENST00000523877 EPB41P11171 864 aaKnown RBP7.2□□□□□ -1.26
SDC2-208ENST00000523877 TOP1P11387 765 aaKnown RBP7.2□□□□□ -1.26
SDC2-208ENST00000523877 P4HA1P13674 534 aa7.2□□□□□ -1.26
SDC2-208ENST00000523877 ZKSCAN1P17029 563 aaPredicted RBP7.2□□□□□ -1.26
SDC2-208ENST00000523877 NR2C2P49116 596 aa7.2□□□□□ -1.26
SDC2-208ENST00000523877 C21orf58P58505 322 aa7.2□□□□□ -1.26
SDC2-208ENST00000523877 DSTNP60981 165 aa7.2□□□□□ -1.26
SDC2-208ENST00000523877 B2MP61769 119 aa7.2□□□□□ -1.26
SDC2-208ENST00000523877 CDK17Q00537 523 aa7.2□□□□□ -1.26
SDC2-208ENST00000523877 UBXN1Q04323 297 aa7.2□□□□□ -1.26
SDC2-208ENST00000523877 GRSF1Q12849 480 aaKnown RBP eCLIP7.2□□□□□ -1.26
SDC2-208ENST00000523877 CEP78Q5JTW2 689 aa7.2□□□□□ -1.26
SDC2-208ENST00000523877 INTS11Q5TA45 600 aaKnown RBP7.2□□□□□ -1.26
SDC2-208ENST00000523877 TMEM164Q5U3C3 297 aa7.2□□□□□ -1.26
SDC2-208ENST00000523877 SLC30A9Q6PML9 568 aa7.2□□□□□ -1.26
SDC2-208ENST00000523877 IKBIPQ70UQ0 350 aa7.2□□□□□ -1.26
SDC2-208ENST00000523877 TAOK1Q7L7X3 1001 aa7.2□□□□□ -1.26
SDC2-208ENST00000523877 ZER1Q7Z7L7 766 aa7.2□□□□□ -1.26
SDC2-208ENST00000523877 SCYL3Q8IZE3 742 aa7.2□□□□□ -1.26
SDC2-208ENST00000523877 LSMEM1Q8N8F7 131 aa7.2□□□□□ -1.26
SDC2-208ENST00000523877 ABTB2Q8N961 1025 aa7.2□□□□□ -1.26
SDC2-208ENST00000523877 SYT2Q8N9I0 419 aaPredicted RBP7.2□□□□□ -1.26
SDC2-208ENST00000523877 ZBTB8BQ8NAP8 495 aaPredicted RBP7.2□□□□□ -1.26
SDC2-208ENST00000523877 GDAP1Q8TB36 358 aa7.2□□□□□ -1.26
SDC2-208ENST00000523877 CUL5Q93034 780 aa7.2□□□□□ -1.26
SDC2-208ENST00000523877 GTF3C6Q969F1 213 aa7.2□□□□□ -1.26
SDC2-208ENST00000523877 KIF1BPQ96EK5 621 aa7.2□□□□□ -1.26
SDC2-208ENST00000523877 SNF8Q96H20 258 aa7.2□□□□□ -1.26
SDC2-208ENST00000523877 RBM41Q96IZ5 413 aaKnown RBP7.2□□□□□ -1.26
SDC2-208ENST00000523877 PDLIM2Q96JY6 352 aa7.2□□□□□ -1.26
SDC2-208ENST00000523877 CNDP1Q96KN2 507 aa7.2□□□□□ -1.26
SDC2-208ENST00000523877 ZFRQ96KR1 1074 aaKnown RBP7.2□□□□□ -1.26
SDC2-208ENST00000523877 EIF2AK1Q9BQI3 630 aaKnown RBP7.2□□□□□ -1.26
SDC2-208ENST00000523877 APOL5Q9BWW9 433 aa7.2□□□□□ -1.26
SDC2-208ENST00000523877 UPF3BQ9BZI7 483 aaKnown RBP7.2□□□□□ -1.26
SDC2-208ENST00000523877 SLC13A1Q9BZW2 595 aa7.2□□□□□ -1.26
SDC2-208ENST00000523877 SMARCAD1Q9H4L7 1026 aa7.2□□□□□ -1.26
SDC2-208ENST00000523877 KIF9Q9HAQ2 790 aa7.2□□□□□ -1.26
SDC2-208ENST00000523877 RASSF1Q9NS23 344 aa7.2□□□□□ -1.26
SDC2-208ENST00000523877 SLC5A4Q9NY91 659 aa7.2□□□□□ -1.26
SDC2-208ENST00000523877 FAM53CQ9NYF3 392 aa7.2□□□□□ -1.26
SDC2-208ENST00000523877 SEPT9Q9UHD8 586 aaPredicted RBP7.2□□□□□ -1.26
SDC2-208ENST00000523877 DSEQ9UL01 958 aa7.2□□□□□ -1.26
SDC2-208ENST00000523877 ZMYND8Q9ULU4 1186 aaPredicted RBP7.2□□□□□ -1.26
SDC2-208ENST00000523877 EDARQ9UNE0 448 aa7.2□□□□□ -1.26
SDC2-208ENST00000523877 CAB39Q9Y376 341 aaPredicted RBP7.2□□□□□ -1.26
SDC2-208ENST00000523877 A0A087WUV0 522 aaPredicted RBP7.19□□□□□ -1.26
SDC2-208ENST00000523877 C17orf113A0A1B0GUU1 675 aa7.19□□□□□ -1.26
SDC2-208ENST00000523877 CCDC162PA2VCL2 907 aa7.19□□□□□ -1.26
SDC2-208ENST00000523877 KLRG2A4D1S0 409 aaPredicted RBP7.19□□□□□ -1.26
SDC2-208ENST00000523877 SPDYE3A6NKU9 549 aa7.19□□□□□ -1.26
SDC2-208ENST00000523877 EBAG9O00559 213 aa7.19□□□□□ -1.26
SDC2-208ENST00000523877 CTIFO43310 598 aaKnown RBP7.19□□□□□ -1.26
SDC2-208ENST00000523877 MAP3K7O43318 606 aa7.19□□□□□ -1.26
SDC2-208ENST00000523877 USO1O60763 962 aaKnown RBP7.19□□□□□ -1.26
SDC2-208ENST00000523877 TIPRLO75663 272 aa7.19□□□□□ -1.26
SDC2-208ENST00000523877 TGDSO95455 350 aa7.19□□□□□ -1.26
SDC2-208ENST00000523877 IL33O95760 270 aa7.19□□□□□ -1.26
SDC2-208ENST00000523877 TYRP1P17643 537 aa7.19□□□□□ -1.26
SDC2-208ENST00000523877 CNGA1P29973 690 aa7.19□□□□□ -1.26
SDC2-208ENST00000523877 GALNSP34059 522 aa7.19□□□□□ -1.26
SDC2-208ENST00000523877 HOXD12P35452 270 aa7.19□□□□□ -1.26
SDC2-208ENST00000523877 CHKAP35790 457 aa7.19□□□□□ -1.26
SDC2-208ENST00000523877 ADH7P40394 386 aa7.19□□□□□ -1.26
SDC2-208ENST00000523877 MCM2P49736 904 aa7.19□□□□□ -1.26
SDC2-208ENST00000523877 CORO7P57737 925 aa7.19□□□□□ -1.26
SDC2-208ENST00000523877 PIP4K2BP78356 416 aa7.19□□□□□ -1.26
SDC2-208ENST00000523877 PURAQ00577 322 aaKnown RBP7.19□□□□□ -1.26
Retrieved 100 of 20,778 RNA–protein pairs in 44.3 ms