RNA–Protein interactions for RNA: ENST00000523588.1

CPNE3-207, Transcript of copine 3, humanhuman

TSL 2

Gene CPNE3, Length 426 nt, Biotype retained intron, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CPNE3-207ENST00000523588 PLA2G2DQ9UNK4 145 aa8.16□□□□□ -1.1
CPNE3-207ENST00000523588 ETV2O00321 342 aaPredicted RBP8.15□□□□□ -1.1
CPNE3-207ENST00000523588 SLC6A11P48066 632 aa8.15□□□□□ -1.1
CPNE3-207ENST00000523588 TRIM61Q5EBN2 209 aa8.15□□□□□ -1.1
CPNE3-207ENST00000523588 NOP9Q86U38 636 aaKnown RBP8.15□□□□□ -1.1
CPNE3-207ENST00000523588 JAZF1Q86VZ6 243 aa8.15□□□□□ -1.1
CPNE3-207ENST00000523588 GSTCDQ8NEC7 633 aa8.15□□□□□ -1.1
CPNE3-207ENST00000523588 KCNN1Q92952 543 aa8.15□□□□□ -1.1
CPNE3-207ENST00000523588 TSPAN17Q96FV3 270 aa8.15□□□□□ -1.1
CPNE3-207ENST00000523588 PEX11GQ96HA9 241 aa8.15□□□□□ -1.1
CPNE3-207ENST00000523588 SLC52A2Q9HAB3 445 aa8.15□□□□□ -1.1
CPNE3-207ENST00000523588 SIRT5Q9NXA8 310 aa8.15□□□□□ -1.1
CPNE3-207ENST00000523588 IRS2Q9Y4H2 1338 aa8.14□□□□□ -1.11
CPNE3-207ENST00000523588 ESYT3A0FGR9 886 aa8.14□□□□□ -1.11
CPNE3-207ENST00000523588 AQP7O14520 342 aa8.14□□□□□ -1.11
CPNE3-207ENST00000523588 SGSM2O43147 1006 aa8.14□□□□□ -1.11
CPNE3-207ENST00000523588 MED14OSP0DP75 135 aa8.14□□□□□ -1.11
CPNE3-207ENST00000523588 FBLN1P23142 703 aa8.14□□□□□ -1.11
CPNE3-207ENST00000523588 CDR1P51861 262 aa8.14□□□□□ -1.11
CPNE3-207ENST00000523588 DLG4P78352 724 aa8.14□□□□□ -1.11
CPNE3-207ENST00000523588 KIZQ2M2Z5 673 aa8.14□□□□□ -1.11
CPNE3-207ENST00000523588 TMEM132EQ6IEE7 984 aa8.14□□□□□ -1.11
CPNE3-207ENST00000523588 BHLHE22Q8NFJ8 381 aaPredicted RBP8.14□□□□□ -1.11
CPNE3-207ENST00000523588 SLC7A14Q8TBB6 771 aa8.14□□□□□ -1.11
CPNE3-207ENST00000523588 JAM3Q9BX67 310 aa8.14□□□□□ -1.11
CPNE3-207ENST00000523588 MRPL4Q9BYD3 311 aaKnown RBP8.14□□□□□ -1.11
CPNE3-207ENST00000523588 NCOA5Q9HCD5 579 aaKnown RBP8.14□□□□□ -1.11
CPNE3-207ENST00000523588 DBR1Q9UK59 544 aaKnown RBP8.14□□□□□ -1.11
CPNE3-207ENST00000523588 NUDT5Q9UKK9 219 aa8.14□□□□□ -1.11
CPNE3-207ENST00000523588 COA3Q9Y2R0 106 aaPredicted RBP8.14□□□□□ -1.11
CPNE3-207ENST00000523588 MRPL42Q9Y6G3 142 aaKnown RBP8.14□□□□□ -1.11
CPNE3-207ENST00000523588 LOC101059915A0A1B0GWI6 518 aaPredicted RBP8.13□□□□□ -1.11
CPNE3-207ENST00000523588 KCNQ2O43526 872 aa8.13□□□□□ -1.11
CPNE3-207ENST00000523588 GLDCP23378 1020 aa8.13□□□□□ -1.11
CPNE3-207ENST00000523588 ZNF200P98182 395 aaPredicted RBP8.13□□□□□ -1.11
CPNE3-207ENST00000523588 LDHDQ86WU2 507 aa8.13□□□□□ -1.11
CPNE3-207ENST00000523588 DCP2Q8IU60 420 aaKnown RBP8.13□□□□□ -1.11
CPNE3-207ENST00000523588 PPIL4Q8WUA2 492 aaKnown RBP eCLIP8.13□□□□□ -1.11
CPNE3-207ENST00000523588 SLC38A3Q99624 504 aa8.13□□□□□ -1.11
CPNE3-207ENST00000523588 EPB41L1Q9H4G0 881 aa8.13□□□□□ -1.11
CPNE3-207ENST00000523588 PCDHA8Q9Y5H6 950 aa8.13□□□□□ -1.11
CPNE3-207ENST00000523588 PCDHA5Q9Y5H7 936 aa8.13□□□□□ -1.11
CPNE3-207ENST00000523588 ZBTB7AO95365 584 aa8.12□□□□□ -1.11
CPNE3-207ENST00000523588 SOD2P04179 222 aa8.12□□□□□ -1.11
CPNE3-207ENST00000523588 C8AP07357 584 aa8.12□□□□□ -1.11
CPNE3-207ENST00000523588 C1QTNF9P0C862 333 aa8.12□□□□□ -1.11
CPNE3-207ENST00000523588 GRK2P25098 689 aa8.12□□□□□ -1.11
CPNE3-207ENST00000523588 GRK3P35626 688 aa8.12□□□□□ -1.11
CPNE3-207ENST00000523588 EPHB3P54753 998 aa8.12□□□□□ -1.11
CPNE3-207ENST00000523588 SLC9A5Q14940 896 aa8.12□□□□□ -1.11
CPNE3-207ENST00000523588 SEC14L1Q92503 715 aa8.12□□□□□ -1.11
CPNE3-207ENST00000523588 PPP1R16BQ96T49 567 aa8.12□□□□□ -1.11
CPNE3-207ENST00000523588 BCAS3Q9H6U6 928 aa8.12□□□□□ -1.11
CPNE3-207ENST00000523588 NDOR1Q9UHB4 597 aa8.12□□□□□ -1.11
CPNE3-207ENST00000523588 PCDHA9Q9Y5H5 950 aa8.12□□□□□ -1.11
CPNE3-207ENST00000523588 ARVCFO00192 962 aa8.11□□□□□ -1.11
CPNE3-207ENST00000523588 PLD2O14939 933 aa8.11□□□□□ -1.11
CPNE3-207ENST00000523588 PPP1R12AO14974 1030 aaPredicted RBP8.11□□□□□ -1.11
CPNE3-207ENST00000523588 EFCAB14O75071 495 aa8.11□□□□□ -1.11
CPNE3-207ENST00000523588 DGKIO75912 1065 aa8.11□□□□□ -1.11
CPNE3-207ENST00000523588 CRTAMO95727 393 aa8.11□□□□□ -1.11
CPNE3-207ENST00000523588 TSPAN15O95858 294 aa8.11□□□□□ -1.11
CPNE3-207ENST00000523588 TMEM253P0C7T8 217 aa8.11□□□□□ -1.11
CPNE3-207ENST00000523588 EMC4Q5J8M3 183 aa8.11□□□□□ -1.11
CPNE3-207ENST00000523588 IGDCC3Q8IVU1 814 aa8.11□□□□□ -1.11
CPNE3-207ENST00000523588 MZB1Q8WU39 189 aa8.11□□□□□ -1.11
CPNE3-207ENST00000523588 SCLYQ96I15 445 aa8.11□□□□□ -1.11
CPNE3-207ENST00000523588 CLUHP3Q96NS8 147 aa8.11□□□□□ -1.11
CPNE3-207ENST00000523588 ALG1Q9BT22 464 aa8.11□□□□□ -1.11
CPNE3-207ENST00000523588 IPPKQ9H8X2 491 aa8.11□□□□□ -1.11
CPNE3-207ENST00000523588 PALD1Q9ULE6 856 aa8.11□□□□□ -1.11
CPNE3-207ENST00000523588 TBX22Q9Y458 520 aa8.11□□□□□ -1.11
CPNE3-207ENST00000523588 WNT9AO14904 365 aa8.1□□□□□ -1.11
CPNE3-207ENST00000523588 N4BP3O15049 544 aa8.1□□□□□ -1.11
CPNE3-207ENST00000523588 TADA3O75528 432 aa8.1□□□□□ -1.11
CPNE3-207ENST00000523588 RAPGEF3O95398 923 aa8.1□□□□□ -1.11
CPNE3-207ENST00000523588 GUCY1A3Q02108 690 aa8.1□□□□□ -1.11
CPNE3-207ENST00000523588 PAK1Q13153 545 aa8.1□□□□□ -1.11
CPNE3-207ENST00000523588 ZNF124Q15973 351 aa8.1□□□□□ -1.11
CPNE3-207ENST00000523588 LCE3BQ5TA77 95 aa8.1□□□□□ -1.11
CPNE3-207ENST00000523588 GIMAP6Q6P9H5 292 aa8.1□□□□□ -1.11
CPNE3-207ENST00000523588 ATG14Q6ZNE5 492 aa8.1□□□□□ -1.11
CPNE3-207ENST00000523588 MTDHQ86UE4 582 aaKnown RBP8.1□□□□□ -1.11
CPNE3-207ENST00000523588 PCDH19Q8TAB3 1148 aa8.1□□□□□ -1.11
CPNE3-207ENST00000523588 AP5M1Q9H0R1 490 aa8.1□□□□□ -1.11
CPNE3-207ENST00000523588 TRIM39Q9HCM9 518 aa8.1□□□□□ -1.11
CPNE3-207ENST00000523588 CD320Q9NPF0 282 aa8.1□□□□□ -1.11
CPNE3-207ENST00000523588 SFMBT1Q9UHJ3 866 aa8.1□□□□□ -1.11
CPNE3-207ENST00000523588 BTBD11A6QL63 1104 aa8.09□□□□□ -1.11
CPNE3-207ENST00000523588 FAM47E-STBD1D6RA91 191 aa8.09□□□□□ -1.11
CPNE3-207ENST00000523588 HGSO14964 777 aaPredicted RBP8.09□□□□□ -1.11
CPNE3-207ENST00000523588 ASGR2P07307 311 aa8.09□□□□□ -1.11
CPNE3-207ENST00000523588 IGFBP6P24592 240 aaPredicted RBP8.09□□□□□ -1.11
CPNE3-207ENST00000523588 PMLP29590 882 aa8.09□□□□□ -1.11
CPNE3-207ENST00000523588 NCKAP1LP55160 1127 aa8.09□□□□□ -1.11
CPNE3-207ENST00000523588 FNDC3BQ53EP0 1204 aaKnown RBP8.09□□□□□ -1.11
CPNE3-207ENST00000523588 HABP4Q5JVS0 413 aaKnown RBP8.09□□□□□ -1.11
CPNE3-207ENST00000523588 STEAP3Q658P3 488 aa8.09□□□□□ -1.11
CPNE3-207ENST00000523588 OTOP3Q7RTS5 596 aa8.09□□□□□ -1.11
CPNE3-207ENST00000523588 BRAPQ7Z569 592 aa8.09□□□□□ -1.11
Retrieved 100 of 20,778 RNA–protein pairs in 40.8 ms