RNA–Protein interactions for RNA: ENST00000523483.5

SDCBP-212, Transcript of syndecan binding protein, humanhuman

TSL 2 BASIC

Gene SDCBP, Length 3,589 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SDCBP-212ENST00000523483 INHBEP58166 350 aa10.56□□□□□ -0.72
SDCBP-212ENST00000523483 PGM5Q15124 567 aa10.56□□□□□ -0.72
SDCBP-212ENST00000523483 TKFCQ3LXA3 575 aa10.56□□□□□ -0.72
SDCBP-212ENST00000523483 SHC4Q6S5L8 630 aa10.56□□□□□ -0.72
SDCBP-212ENST00000523483 CKAP2LQ8IYA6 745 aa10.56□□□□□ -0.72
SDCBP-212ENST00000523483 DHX58Q96C10 678 aa10.56□□□□□ -0.72
SDCBP-212ENST00000523483 TSKSQ9UJT2 592 aa10.56□□□□□ -0.72
SDCBP-212ENST00000523483 A0A087WWV3 80 aa10.56□□□□□ -0.72
SDCBP-212ENST00000523483 POLR2DO15514 142 aaKnown RBP10.56□□□□□ -0.72
SDCBP-212ENST00000523483 PPP6R2O75170 966 aa10.56□□□□□ -0.72
SDCBP-212ENST00000523483 PTPREP23469 700 aa10.56□□□□□ -0.72
SDCBP-212ENST00000523483 ADORA2AP29274 412 aa10.56□□□□□ -0.72
SDCBP-212ENST00000523483 SYKP43405 635 aa10.56□□□□□ -0.72
SDCBP-212ENST00000523483 VEGFBP49765 207 aa10.56□□□□□ -0.72
SDCBP-212ENST00000523483 PDE4DQ08499 809 aa10.56□□□□□ -0.72
SDCBP-212ENST00000523483 NCAPH2Q6IBW4 605 aa10.56□□□□□ -0.72
SDCBP-212ENST00000523483 STAMQ92783 540 aa10.56□□□□□ -0.72
SDCBP-212ENST00000523483 ZNF577Q9BSK1 485 aa10.56□□□□□ -0.72
SDCBP-212ENST00000523483 SRPRBQ9Y5M8 271 aaKnown RBP10.56□□□□□ -0.72
SDCBP-212ENST00000523483 COL11A1P12107 1806 aaPredicted RBP10.56□□□□□ -0.72
SDCBP-212ENST00000523483 CUTAO60888 179 aa10.56□□□□□ -0.72
SDCBP-212ENST00000523483 ARP10275 920 aa10.56□□□□□ -0.72
SDCBP-212ENST00000523483 TXLNAP40222 546 aa10.56□□□□□ -0.72
SDCBP-212ENST00000523483 MTMR1Q13613 665 aa10.56□□□□□ -0.72
SDCBP-212ENST00000523483 FAM110CQ1W6H9 321 aa10.56□□□□□ -0.72
SDCBP-212ENST00000523483 SKOR2Q2VWA4 1001 aaPredicted RBP10.56□□□□□ -0.72
SDCBP-212ENST00000523483 AXDND1Q5T1B0 1012 aaPredicted RBP10.56□□□□□ -0.72
SDCBP-212ENST00000523483 MCTP2Q6DN12 878 aa10.56□□□□□ -0.72
SDCBP-212ENST00000523483 TMEM87AQ8NBN3 555 aa10.56□□□□□ -0.72
SDCBP-212ENST00000523483 MROH8Q9H579 483 aa10.56□□□□□ -0.72
SDCBP-212ENST00000523483 LRWD1Q9UFC0 647 aa10.56□□□□□ -0.72
SDCBP-212ENST00000523483 BRCA2P51587 3418 aa10.56□□□□□ -0.72
SDCBP-212ENST00000523483 TNPO2O14787 897 aaKnown RBP10.55□□□□□ -0.72
SDCBP-212ENST00000523483 EDIL3O43854 480 aa10.55□□□□□ -0.72
SDCBP-212ENST00000523483 TLR2O60603 784 aa10.55□□□□□ -0.72
SDCBP-212ENST00000523483 GCFC2P16383 781 aaKnown RBP10.55□□□□□ -0.72
SDCBP-212ENST00000523483 CYP4A11Q02928 519 aa10.55□□□□□ -0.72
SDCBP-212ENST00000523483 KARSQ15046 597 aaKnown RBP10.55□□□□□ -0.72
SDCBP-212ENST00000523483 IL17AQ16552 155 aa10.55□□□□□ -0.72
SDCBP-212ENST00000523483 KLHL40Q2TBA0 621 aa10.55□□□□□ -0.72
SDCBP-212ENST00000523483 GPR142Q7Z601 462 aa10.55□□□□□ -0.72
SDCBP-212ENST00000523483 FERMT2Q96AC1 680 aa10.55□□□□□ -0.72
SDCBP-212ENST00000523483 CDK5RAP3Q96JB5 506 aa10.55□□□□□ -0.72
SDCBP-212ENST00000523483 ADD3Q9UEY8 706 aaKnown RBP10.55□□□□□ -0.72
SDCBP-212ENST00000523483 KCNH3Q9ULD8 1083 aa10.55□□□□□ -0.72
SDCBP-212ENST00000523483 PFASO15067 1338 aa10.55□□□□□ -0.72
SDCBP-212ENST00000523483 GAS7O60861 476 aa10.55□□□□□ -0.72
SDCBP-212ENST00000523483 SSBP05455 408 aaKnown RBP eCLIP10.55□□□□□ -0.72
SDCBP-212ENST00000523483 ITGB5P18084 799 aa10.55□□□□□ -0.72
SDCBP-212ENST00000523483 CYP2B6P20813 491 aa10.55□□□□□ -0.72
SDCBP-212ENST00000523483 CCND2P30279 289 aa10.55□□□□□ -0.72
SDCBP-212ENST00000523483 LRCH2Q5VUJ6 765 aa10.55□□□□□ -0.72
SDCBP-212ENST00000523483 TMEM63CQ9P1W3 806 aa10.55□□□□□ -0.72
SDCBP-212ENST00000523483 SYCE3A1L190 88 aa10.55□□□□□ -0.72
SDCBP-212ENST00000523483 MSH4O15457 936 aa10.55□□□□□ -0.72
SDCBP-212ENST00000523483 MRPS9P82933 396 aaKnown RBP10.55□□□□□ -0.72
SDCBP-212ENST00000523483 PPP4R3AQ6IN85 833 aa10.55□□□□□ -0.72
SDCBP-212ENST00000523483 GTF3C2Q8WUA4 911 aaPredicted RBP10.55□□□□□ -0.72
SDCBP-212ENST00000523483 RAB34Q9BZG1 259 aa10.55□□□□□ -0.72
SDCBP-212ENST00000523483 KCNH7Q9NS40 1196 aa10.55□□□□□ -0.72
SDCBP-212ENST00000523483 SLC45A1Q9Y2W3 748 aa10.55□□□□□ -0.72
SDCBP-212ENST00000523483 IPO5O00410 1097 aaKnown RBP10.54□□□□□ -0.72
SDCBP-212ENST00000523483 AFMP43652 599 aa10.54□□□□□ -0.72
SDCBP-212ENST00000523483 SYAP1Q96A49 352 aaPredicted RBP10.54□□□□□ -0.72
SDCBP-212ENST00000523483 NUP62CLQ9H1M0 184 aa10.54□□□□□ -0.72
SDCBP-212ENST00000523483 TNMDQ9H2S6 317 aa10.54□□□□□ -0.72
SDCBP-212ENST00000523483 RASSF10A6NK89 507 aa10.54□□□□□ -0.72
SDCBP-212ENST00000523483 ALDH5A1P51649 535 aaPredicted RBP10.54□□□□□ -0.72
SDCBP-212ENST00000523483 STXBP2Q15833 593 aa10.54□□□□□ -0.72
SDCBP-212ENST00000523483 CNNM3Q8NE01 707 aa10.54□□□□□ -0.72
SDCBP-212ENST00000523483 SNX29Q8TEQ0 813 aa10.54□□□□□ -0.72
SDCBP-212ENST00000523483 HAS1Q92839 578 aa10.54□□□□□ -0.72
SDCBP-212ENST00000523483 SOWAHBA6NEL2 793 aa10.54□□□□□ -0.72
SDCBP-212ENST00000523483 ZNF202O95125 648 aa10.54□□□□□ -0.72
SDCBP-212ENST00000523483 CMA1P23946 247 aa10.54□□□□□ -0.72
SDCBP-212ENST00000523483 FAM160A1Q05DH4 1040 aa10.54□□□□□ -0.72
SDCBP-212ENST00000523483 ISM2Q6H9L7 571 aa10.54□□□□□ -0.72
SDCBP-212ENST00000523483 PLEKHH3Q7Z736 793 aa10.54□□□□□ -0.72
SDCBP-212ENST00000523483 FBXO16Q8IX29 292 aaPredicted RBP10.54□□□□□ -0.72
SDCBP-212ENST00000523483 C4orf32Q8N8J7 132 aa10.54□□□□□ -0.72
SDCBP-212ENST00000523483 NAP1L4Q99733 375 aaKnown RBP10.54□□□□□ -0.72
SDCBP-212ENST00000523483 MXRA8Q9BRK3 442 aa10.54□□□□□ -0.72
SDCBP-212ENST00000523483 RLFQ13129 1914 aa10.53□□□□□ -0.72
SDCBP-212ENST00000523483 CA12O43570 354 aa10.53□□□□□ -0.72
SDCBP-212ENST00000523483 PCNX4Q63HM2 1172 aa10.53□□□□□ -0.72
SDCBP-212ENST00000523483 ARL6IP4Q66PJ3 421 aaKnown RBP10.53□□□□□ -0.72
SDCBP-212ENST00000523483 GRAMD1CQ8IYS0 662 aa10.53□□□□□ -0.72
SDCBP-212ENST00000523483 ARHGAP39Q9C0H5 1083 aa10.53□□□□□ -0.72
SDCBP-212ENST00000523483 MYH7BA7E2Y1 1941 aa10.53□□□□□ -0.72
SDCBP-212ENST00000523483 COPB2P35606 906 aa10.53□□□□□ -0.72
SDCBP-212ENST00000523483 CHMP4BP1P59074 171 aa10.53□□□□□ -0.72
SDCBP-212ENST00000523483 GNPTABQ3T906 1256 aa10.53□□□□□ -0.72
SDCBP-212ENST00000523483 KRT79Q5XKE5 535 aa10.53□□□□□ -0.72
SDCBP-212ENST00000523483 CABP7Q86V35 215 aa10.53□□□□□ -0.72
SDCBP-212ENST00000523483 BEGAINQ9BUH8 593 aa10.53□□□□□ -0.72
SDCBP-212ENST00000523483 ASTN1O14525 1302 aa10.53□□□□□ -0.72
SDCBP-212ENST00000523483 MEIS1O00470 390 aa10.52□□□□□ -0.72
SDCBP-212ENST00000523483 LAD1O00515 517 aa10.52□□□□□ -0.72
SDCBP-212ENST00000523483 ATP9AO75110 1047 aa10.52□□□□□ -0.72
SDCBP-212ENST00000523483 COBLO75128 1261 aa10.52□□□□□ -0.72
Retrieved 100 of 20,778 RNA–protein pairs in 56.1 ms