RNA–Protein interactions for RNA: ENST00000523430.5

SQLE-206, Transcript of squalene epoxidase, humanhuman

TSL 2 BASIC

Gene SQLE, Length 1,879 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SQLE-206ENST00000523430 KCNK18Q7Z418 384 aa23.36■■□□□ 1.33
SQLE-206ENST00000523430 SYNRGQ9UMZ2 1314 aa23.35■■□□□ 1.33
SQLE-206ENST00000523430 C19orf81C9J6K1 198 aa23.35■■□□□ 1.33
SQLE-206ENST00000523430 TBX3O15119 743 aa23.35■■□□□ 1.33
SQLE-206ENST00000523430 MYL1P05976 194 aa23.35■■□□□ 1.33
SQLE-206ENST00000523430 DHX8Q14562 1220 aaKnown RBP23.35■■□□□ 1.33
SQLE-206ENST00000523430 USP50Q70EL3 339 aaPredicted RBP23.35■■□□□ 1.33
SQLE-206ENST00000523430 DRC7Q8IY82 874 aa23.35■■□□□ 1.33
SQLE-206ENST00000523430 CNKSR2Q8WXI2 1034 aa23.35■■□□□ 1.33
SQLE-206ENST00000523430 TRIM9Q9C026 710 aa23.35■■□□□ 1.33
SQLE-206ENST00000523430 STK17AQ9UEE5 414 aa23.35■■□□□ 1.33
SQLE-206ENST00000523430 GDAQ9Y2T3 454 aa23.35■■□□□ 1.33
SQLE-206ENST00000523430 IGF2BP2Q9Y6M1 599 aaKnown RBP eCLIP23.35■■□□□ 1.335e-9■■■□□ 18.3
SQLE-206ENST00000523430 COL11A1P12107 1806 aaPredicted RBP23.35■■□□□ 1.33
SQLE-206ENST00000523430 ZBED4O75132 1171 aa23.34■■□□□ 1.33
SQLE-206ENST00000523430 ERCC5P28715 1186 aaPredicted RBP23.34■■□□□ 1.33
SQLE-206ENST00000523430 MAP3K9P80192 1104 aa23.34■■□□□ 1.33
SQLE-206ENST00000523430 KMT5BQ4FZB7 885 aa23.34■■□□□ 1.33
SQLE-206ENST00000523430 ZNF658Q5TYW1 1059 aaPredicted RBP23.34■■□□□ 1.33
SQLE-206ENST00000523430 FAM43AQ8N2R8 423 aa23.34■■□□□ 1.33
SQLE-206ENST00000523430 ENOX1Q8TC92 643 aaKnown RBP23.34■■□□□ 1.33
SQLE-206ENST00000523430 ZNF830Q96NB3 372 aaPredicted RBP23.34■■□□□ 1.33
SQLE-206ENST00000523430 IFNKQ9P0W0 207 aa23.34■■□□□ 1.33
SQLE-206ENST00000523430 NFE2L3Q9Y4A8 694 aa23.34■■□□□ 1.33
SQLE-206ENST00000523430 MCM6Q14566 821 aa23.34■■□□□ 1.33
SQLE-206ENST00000523430 HSP90AA4PQ58FG1 418 aa23.34■■□□□ 1.33
SQLE-206ENST00000523430 LARP4BQ92615 738 aaKnown RBP23.34■■□□□ 1.33
SQLE-206ENST00000523430 RAD54LQ92698 747 aa23.34■■□□□ 1.33
SQLE-206ENST00000523430 ZFP91Q96JP5 570 aaPredicted RBP23.34■■□□□ 1.33
SQLE-206ENST00000523430 XPO4Q9C0E2 1151 aaKnown RBP23.34■■□□□ 1.33
SQLE-206ENST00000523430 EHMT1Q9H9B1 1298 aa23.34■■□□□ 1.33
SQLE-206ENST00000523430 TMOD4Q9NZQ9 345 aa23.34■■□□□ 1.33
SQLE-206ENST00000523430 CTNND2Q9UQB3 1225 aa23.34■■□□□ 1.33
SQLE-206ENST00000523430 ZKSCAN5Q9Y2L8 839 aa23.34■■□□□ 1.33
SQLE-206ENST00000523430 CTDP1Q9Y5B0 961 aaPredicted RBP23.34■■□□□ 1.33
SQLE-206ENST00000523430 CCT6AP40227 531 aaKnown RBP23.33■■□□□ 1.33
SQLE-206ENST00000523430 REPS2Q8NFH8 660 aa23.33■■□□□ 1.33
SQLE-206ENST00000523430 CDCA5Q96FF9 252 aa23.33■■□□□ 1.33
SQLE-206ENST00000523430 C7orf25Q9BPX7 421 aa23.33■■□□□ 1.33
SQLE-206ENST00000523430 NRBP1Q9UHY1 535 aa23.33■■□□□ 1.33
SQLE-206ENST00000523430 VAV3Q9UKW4 847 aa23.33■■□□□ 1.33
SQLE-206ENST00000523430 PPP1R12BO60237 982 aaPredicted RBP23.32■■□□□ 1.32
SQLE-206ENST00000523430 STX17P56962 302 aa23.32■■□□□ 1.32
SQLE-206ENST00000523430 FANCCQ00597 558 aa23.32■■□□□ 1.32
SQLE-206ENST00000523430 GHRHRQ02643 423 aa23.32■■□□□ 1.32
SQLE-206ENST00000523430 KCNB1Q14721 858 aa23.32■■□□□ 1.32
SQLE-206ENST00000523430 MCF2L2Q86YR7 1114 aa23.32■■□□□ 1.32
SQLE-206ENST00000523430 FAM20AQ96MK3 541 aa23.32■■□□□ 1.32
SQLE-206ENST00000523430 RTN4Q9NQC3 1192 aaKnown RBP23.32■■□□□ 1.32
SQLE-206ENST00000523430 PTPRFP10586 1907 aa23.32■■□□□ 1.32
SQLE-206ENST00000523430 RPTORQ8N122 1335 aa23.32■■□□□ 1.32
SQLE-206ENST00000523430 KDM3AQ9Y4C1 1321 aa23.32■■□□□ 1.32
SQLE-206ENST00000523430 POTEB3A0JP26 581 aa23.32■■□□□ 1.32
SQLE-206ENST00000523430 GLTPD2A6NH11 291 aa23.32■■□□□ 1.32
SQLE-206ENST00000523430 GOLGA6L6A8MZA4 724 aa23.32■■□□□ 1.32
SQLE-206ENST00000523430 POTECB2RU33 542 aa23.32■■□□□ 1.32
SQLE-206ENST00000523430 PTGS1P23219 599 aa23.32■■□□□ 1.32
SQLE-206ENST00000523430 DSG3P32926 999 aa23.32■■□□□ 1.32
SQLE-206ENST00000523430 ASIC1P78348 528 aa23.32■■□□□ 1.32
SQLE-206ENST00000523430 CT47A1Q5JQC4 288 aaPredicted RBP23.32■■□□□ 1.32
SQLE-206ENST00000523430 HYIQ5T013 277 aa23.32■■□□□ 1.32
SQLE-206ENST00000523430 NCAPH2Q6IBW4 605 aa23.32■■□□□ 1.32
SQLE-206ENST00000523430 POTEBQ6S5H4 581 aa23.32■■□□□ 1.32
SQLE-206ENST00000523430 SLC30A10Q6XR72 485 aa23.32■■□□□ 1.32
SQLE-206ENST00000523430 CSADQ9Y600 493 aa23.32■■□□□ 1.32
SQLE-206ENST00000523430 ZNF18P17022 549 aa23.31■■□□□ 1.32
SQLE-206ENST00000523430 CCDC144BQ3MJ40 725 aa23.31■■□□□ 1.32
SQLE-206ENST00000523430 CATSPERGQ6ZRH7 1159 aa23.31■■□□□ 1.32
SQLE-206ENST00000523430 MOB2Q70IA6 237 aa23.31■■□□□ 1.32
SQLE-206ENST00000523430 SV2BQ7L1I2 683 aa23.31■■□□□ 1.32
SQLE-206ENST00000523430 TRERF1Q96PN7 1200 aa23.31■■□□□ 1.32
SQLE-206ENST00000523430 RIPK3Q9Y572 518 aa23.31■■□□□ 1.32
SQLE-206ENST00000523430 ZC3H4Q9UPT8 1303 aaKnown RBP23.31■■□□□ 1.32
SQLE-206ENST00000523430 MYMKA6NI61 221 aa23.3■■□□□ 1.32
SQLE-206ENST00000523430 COBLO75128 1261 aa23.3■■□□□ 1.32
SQLE-206ENST00000523430 MED24O75448 989 aa23.3■■□□□ 1.32
SQLE-206ENST00000523430 RHOBTB3O94955 611 aa23.3■■□□□ 1.32
SQLE-206ENST00000523430 SH3D19Q5HYK7 790 aa23.3■■□□□ 1.32
SQLE-206ENST00000523430 IL31RAQ8NI17 732 aa23.3■■□□□ 1.32
SQLE-206ENST00000523430 KCNF1Q9H3M0 494 aa23.3■■□□□ 1.32
SQLE-206ENST00000523430 MAPK8IP1Q9UQF2 711 aa23.3■■□□□ 1.32
SQLE-206ENST00000523430 FDX1P10109 184 aa23.3■■□□□ 1.32
SQLE-206ENST00000523430 IREB2P48200 963 aaKnown RBP23.3■■□□□ 1.32
SQLE-206ENST00000523430 AMPD3Q01432 767 aa23.3■■□□□ 1.32
SQLE-206ENST00000523430 CEP55Q53EZ4 464 aa23.3■■□□□ 1.32
SQLE-206ENST00000523430 EAPPQ56P03 285 aaPredicted RBP23.3■■□□□ 1.32
SQLE-206ENST00000523430 SYTL5Q8TDW5 730 aaPredicted RBP23.3■■□□□ 1.32
SQLE-206ENST00000523430 ZC3H15Q8WU90 426 aaKnown RBP23.3■■□□□ 1.32
SQLE-206ENST00000523430 ELP3Q9H9T3 547 aa23.3■■□□□ 1.32
SQLE-206ENST00000523430 SAMSN1Q9NSI8 373 aaKnown RBP23.3■■□□□ 1.32
SQLE-206ENST00000523430 ADAMTS5Q9UNA0 930 aa23.3■■□□□ 1.32
SQLE-206ENST00000523430 SCN4AP35499 1836 aa23.29■■□□□ 1.32
SQLE-206ENST00000523430 MSNP26038 577 aaKnown RBP23.29■■□□□ 1.32
SQLE-206ENST00000523430 PRCPP42785 496 aa23.29■■□□□ 1.32
SQLE-206ENST00000523430 COG2Q14746 738 aa23.29■■□□□ 1.32
SQLE-206ENST00000523430 CCDC186Q7Z3E2 898 aa23.29■■□□□ 1.32
SQLE-206ENST00000523430 CLMNQ96JQ2 1002 aa23.29■■□□□ 1.32
SQLE-206ENST00000523430 TAF1DQ9H5J8 278 aaPredicted RBP23.29■■□□□ 1.32
SQLE-206ENST00000523430 RNF146Q9NTX7 359 aa23.29■■□□□ 1.32
SQLE-206ENST00000523430 ZNF214Q9UL59 606 aaPredicted RBP23.29■■□□□ 1.32
Retrieved 100 of 20,778 RNA–protein pairs in 21.1 ms