RNA–Protein interactions for RNA: ENST00000522796.1

HMGB4-204, Transcript of high mobility group box 4, humanhuman

APPRIS P1 TSL 5 BASIC

Gene HMGB4, Length 2,505 nt, Biotype protein coding.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGB4-204ENST00000522796 WASHC4Q2M389 1173 aa9.05□□□□□ -0.96
HMGB4-204ENST00000522796 PLEKHG6Q3KR16 790 aa9.05□□□□□ -0.96
HMGB4-204ENST00000522796 KCTD16Q68DU8 428 aa9.05□□□□□ -0.96
HMGB4-204ENST00000522796 ANKRD44Q8N8A2 993 aa9.05□□□□□ -0.96
HMGB4-204ENST00000522796 NOA1Q8NC60 698 aaKnown RBP9.05□□□□□ -0.96
HMGB4-204ENST00000522796 DHX38Q92620 1227 aaKnown RBP9.05□□□□□ -0.96
HMGB4-204ENST00000522796 SIKE1Q9BRV8 207 aa9.05□□□□□ -0.96
HMGB4-204ENST00000522796 TIPINQ9BVW5 301 aa9.05□□□□□ -0.96
HMGB4-204ENST00000522796 PANK4Q9NVE7 773 aa9.05□□□□□ -0.96
HMGB4-204ENST00000522796 HYPKQ9NX55 129 aa9.05□□□□□ -0.96
HMGB4-204ENST00000522796 STAG3Q9UJ98 1225 aa9.05□□□□□ -0.96
HMGB4-204ENST00000522796 FAM32AQ9Y421 112 aaKnown RBP9.05□□□□□ -0.96
HMGB4-204ENST00000522796 PCDHGB3Q9Y5G1 929 aa9.05□□□□□ -0.96
HMGB4-204ENST00000522796 MED14O60244 1454 aa9.05□□□□□ -0.96
HMGB4-204ENST00000522796 ACADSP16219 412 aa9.05□□□□□ -0.96
HMGB4-204ENST00000522796 CD9P21926 228 aa9.05□□□□□ -0.96
HMGB4-204ENST00000522796 ETV3P41162 512 aa9.05□□□□□ -0.96
HMGB4-204ENST00000522796 SARSP49591 514 aaKnown RBP9.05□□□□□ -0.96
HMGB4-204ENST00000522796 LMNB2Q03252 620 aa9.05□□□□□ -0.96
HMGB4-204ENST00000522796 MCL1Q07820 350 aa9.05□□□□□ -0.96
HMGB4-204ENST00000522796 PCNX4Q63HM2 1172 aa9.05□□□□□ -0.96
HMGB4-204ENST00000522796 TRIM68Q6AZZ1 485 aa9.05□□□□□ -0.96
HMGB4-204ENST00000522796 ZNF746Q6NUN9 644 aaPredicted RBP9.05□□□□□ -0.96
HMGB4-204ENST00000522796 RUFY4Q6ZNE9 571 aa9.05□□□□□ -0.96
HMGB4-204ENST00000522796 PNMA8AQ86V59 439 aaPredicted RBP9.05□□□□□ -0.96
HMGB4-204ENST00000522796 TXNDC2Q86VQ3 553 aa9.05□□□□□ -0.96
HMGB4-204ENST00000522796 TMEM139Q8IV31 216 aa9.05□□□□□ -0.96
HMGB4-204ENST00000522796 AOPEPQ8N6M6 819 aa9.05□□□□□ -0.96
HMGB4-204ENST00000522796 GALNT6Q8NCL4 622 aa9.05□□□□□ -0.96
HMGB4-204ENST00000522796 CASP10Q92851 521 aa9.05□□□□□ -0.96
HMGB4-204ENST00000522796 PSKH2Q96QS6 385 aa9.05□□□□□ -0.96
HMGB4-204ENST00000522796 NSRP1Q9H0G5 558 aaKnown RBP9.05□□□□□ -0.96
HMGB4-204ENST00000522796 TPK1Q9H3S4 243 aa9.05□□□□□ -0.96
HMGB4-204ENST00000522796 IFNKQ9P0W0 207 aa9.05□□□□□ -0.96
HMGB4-204ENST00000522796 DLGAP2Q9P1A6 1054 aa9.05□□□□□ -0.96
HMGB4-204ENST00000522796 POLG2Q9UHN1 485 aa9.05□□□□□ -0.96
HMGB4-204ENST00000522796 SCOCQ9UIL1 159 aa9.05□□□□□ -0.96
HMGB4-204ENST00000522796 CCPG1Q9ULG6 757 aa9.05□□□□□ -0.96
HMGB4-204ENST00000522796 C5orf60A6NFR6 353 aa9.04□□□□□ -0.96
HMGB4-204ENST00000522796 FOXN3O00409 490 aaPredicted RBP9.04□□□□□ -0.96
HMGB4-204ENST00000522796 TACC1O75410 805 aa9.04□□□□□ -0.96
HMGB4-204ENST00000522796 GNA14O95837 355 aa9.04□□□□□ -0.96
HMGB4-204ENST00000522796 ASLP04424 464 aa9.04□□□□□ -0.96
HMGB4-204ENST00000522796 ITGA2BP08514 1039 aa9.04□□□□□ -0.96
HMGB4-204ENST00000522796 ATP5DP30049 168 aa9.04□□□□□ -0.96
HMGB4-204ENST00000522796 PCK1P35558 622 aa9.04□□□□□ -0.96
HMGB4-204ENST00000522796 TTMPQ5BVD1 217 aa9.04□□□□□ -0.96
HMGB4-204ENST00000522796 SYDE2Q5VT97 1194 aa9.04□□□□□ -0.96
HMGB4-204ENST00000522796 PPP1R3FQ6ZSY5 799 aaPredicted RBP9.04□□□□□ -0.96
HMGB4-204ENST00000522796 FAM20CQ8IXL6 584 aa9.04□□□□□ -0.96
HMGB4-204ENST00000522796 RASEFQ8IZ41 740 aa9.04□□□□□ -0.96
HMGB4-204ENST00000522796 TMEM57Q8N5G2 664 aa9.04□□□□□ -0.96
HMGB4-204ENST00000522796 TUBGCP5Q96RT8 1024 aa9.04□□□□□ -0.96
HMGB4-204ENST00000522796 SETDB2Q96T68 719 aa9.04□□□□□ -0.96
HMGB4-204ENST00000522796 CCDC87Q9NVE4 849 aa9.04□□□□□ -0.96
HMGB4-204ENST00000522796 FAM120AQ9NZB2 1118 aaKnown RBP eCLIP9.04□□□□□ -0.96
HMGB4-204ENST00000522796 CABP1Q9NZU7 370 aa9.04□□□□□ -0.96
HMGB4-204ENST00000522796 HSFX1Q9UBD0 423 aa9.04□□□□□ -0.96
HMGB4-204ENST00000522796 RIMKLBQ9ULI2 386 aa9.04□□□□□ -0.96
HMGB4-204ENST00000522796 TTC7AQ9ULT0 858 aaPredicted RBP9.04□□□□□ -0.96
HMGB4-204ENST00000522796 SLC12A4Q9UP95 1085 aa9.04□□□□□ -0.96
HMGB4-204ENST00000522796 NPHP4O75161 1426 aaPredicted RBP9.04□□□□□ -0.96
HMGB4-204ENST00000522796 PPRC1Q5VV67 1664 aaKnown RBP9.04□□□□□ -0.96
HMGB4-204ENST00000522796 A0A1W2PRQ8 180 aa9.04□□□□□ -0.96
HMGB4-204ENST00000522796 RASA4O43374 803 aa9.04□□□□□ -0.96
HMGB4-204ENST00000522796 B4GALT4O60513 344 aa9.04□□□□□ -0.96
HMGB4-204ENST00000522796 NR1I2O75469 434 aa9.04□□□□□ -0.96
HMGB4-204ENST00000522796 STAMBPO95630 424 aa9.04□□□□□ -0.96
HMGB4-204ENST00000522796 MDH1P40925 334 aaKnown RBP9.04□□□□□ -0.96
HMGB4-204ENST00000522796 ACADVLP49748 655 aa9.04□□□□□ -0.96
HMGB4-204ENST00000522796 RCAN1P53805 252 aa9.04□□□□□ -0.96
HMGB4-204ENST00000522796 HPCAP84074 193 aa9.04□□□□□ -0.96
HMGB4-204ENST00000522796 NMIQ13287 307 aaPredicted RBP9.04□□□□□ -0.96
HMGB4-204ENST00000522796 TUBA3CQ13748 450 aa9.04□□□□□ -0.96
HMGB4-204ENST00000522796 SPIDRQ14159 915 aa9.04□□□□□ -0.96
HMGB4-204ENST00000522796 FAM209AQ5JX71 171 aa9.04□□□□□ -0.96
HMGB4-204ENST00000522796 PPP4R3AQ6IN85 833 aa9.04□□□□□ -0.96
HMGB4-204ENST00000522796 FAM173BQ6P4H8 233 aa9.04□□□□□ -0.96
HMGB4-204ENST00000522796 CAPN12Q6ZSI9 719 aa9.04□□□□□ -0.96
HMGB4-204ENST00000522796 BEND5Q7L4P6 421 aa9.04□□□□□ -0.96
HMGB4-204ENST00000522796 PTF1AQ7RTS3 328 aa9.04□□□□□ -0.96
HMGB4-204ENST00000522796 KRT27Q7Z3Y8 459 aa9.04□□□□□ -0.96
HMGB4-204ENST00000522796 HDGFL2Q7Z4V5 671 aaPredicted RBP9.04□□□□□ -0.96
HMGB4-204ENST00000522796 CACNA2D3Q8IZS8 1091 aa9.04□□□□□ -0.96
HMGB4-204ENST00000522796 SPERTQ8NA61 448 aa9.04□□□□□ -0.96
HMGB4-204ENST00000522796 PAWRQ96IZ0 340 aaKnown RBP9.04□□□□□ -0.96
HMGB4-204ENST00000522796 SLF1Q9BQI6 1058 aa9.04□□□□□ -0.96
HMGB4-204ENST00000522796 FANCFQ9NPI8 374 aa9.04□□□□□ -0.96
HMGB4-204ENST00000522796 HEY1Q9Y5J3 304 aa9.04□□□□□ -0.96
HMGB4-204ENST00000522796 ITIH6Q6UXX5 1313 aa9.04□□□□□ -0.96
HMGB4-204ENST00000522796 CPSF1Q10570 1443 aaKnown RBP9.04□□□□□ -0.96
HMGB4-204ENST00000522796 CASKIN1Q8WXD9 1431 aa9.04□□□□□ -0.96
HMGB4-204ENST00000522796 ADGRL3Q9HAR2 1447 aa9.04□□□□□ -0.96
HMGB4-204ENST00000522796 HECW2Q9P2P5 1572 aa9.03□□□□□ -0.96
HMGB4-204ENST00000522796 E7EVH7 732 aa9.03□□□□□ -0.96
HMGB4-204ENST00000522796 STX10O60499 249 aa9.03□□□□□ -0.96
HMGB4-204ENST00000522796 PCNAP12004 261 aa9.03□□□□□ -0.96
HMGB4-204ENST00000522796 SERPINB8P50452 374 aa9.03□□□□□ -0.96
HMGB4-204ENST00000522796 PDCD4Q53EL6 469 aaKnown RBP9.03□□□□□ -0.96
HMGB4-204ENST00000522796 CYP26C1Q6V0L0 522 aa9.03□□□□□ -0.96
Retrieved 100 of 20,778 RNA–protein pairs in 12.7 ms