RNA–Protein interactions for RNA: ENST00000522719.2

NKX2-1-204, Transcript of NK2 homeobox 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene NKX2-1, Length 1,417 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NKX2-1-204ENST00000522719 FOXD4L3Q6VB84 417 aaPredicted RBP29.17■■■□□ 2.26
NKX2-1-204ENST00000522719 NPLOC4Q8TAT6 608 aa29.17■■■□□ 2.26
NKX2-1-204ENST00000522719 MBOAT7Q96N66 472 aa29.17■■■□□ 2.26
NKX2-1-204ENST00000522719 EIF4ENIF1Q9NRA8 985 aaKnown RBP29.17■■■□□ 2.26
NKX2-1-204ENST00000522719 POLR3EQ9NVU0 708 aa29.17■■■□□ 2.26
NKX2-1-204ENST00000522719 PCDHB6Q9Y5E3 794 aa29.17■■■□□ 2.26
NKX2-1-204ENST00000522719 BMP15O95972 392 aa29.16■■■□□ 2.26
NKX2-1-204ENST00000522719 MYCLP12524 364 aaPredicted RBP29.16■■■□□ 2.26
NKX2-1-204ENST00000522719 XRCC5P13010 732 aaKnown RBP29.16■■■□□ 2.26
NKX2-1-204ENST00000522719 KRT85P78386 507 aa29.16■■■□□ 2.26
NKX2-1-204ENST00000522719 MRPS9P82933 396 aaKnown RBP29.16■■■□□ 2.26
NKX2-1-204ENST00000522719 PDE4DQ08499 809 aa29.16■■■□□ 2.26
NKX2-1-204ENST00000522719 CEP55Q53EZ4 464 aa29.16■■■□□ 2.26
NKX2-1-204ENST00000522719 USP28Q96RU2 1077 aa29.16■■■□□ 2.26
NKX2-1-204ENST00000522719 WNT7AO00755 349 aa29.15■■■□□ 2.26
NKX2-1-204ENST00000522719 CAP1Q01518 475 aa29.15■■■□□ 2.26
NKX2-1-204ENST00000522719 ANO1Q5XXA6 986 aa29.15■■■□□ 2.26
NKX2-1-204ENST00000522719 NIPA1Q7RTP0 329 aa29.15■■■□□ 2.26
NKX2-1-204ENST00000522719 MXRA8Q9BRK3 442 aa29.15■■■□□ 2.26
NKX2-1-204ENST00000522719 RTEL1Q9NZ71 1219 aa29.15■■■□□ 2.26
NKX2-1-204ENST00000522719 SRRDQ9UH36 339 aa29.15■■■□□ 2.26
NKX2-1-204ENST00000522719 CEP131Q9UPN4 1083 aa29.15■■■□□ 2.26
NKX2-1-204ENST00000522719 EIF3JO75822 258 aaKnown RBP29.14■■■□□ 2.26
NKX2-1-204ENST00000522719 CYP2B6P20813 491 aa29.14■■■□□ 2.26
NKX2-1-204ENST00000522719 MCM7P33993 719 aa29.14■■■□□ 2.26
NKX2-1-204ENST00000522719 FLT3LGP49771 235 aa29.14■■■□□ 2.26
NKX2-1-204ENST00000522719 NBR1Q14596 966 aa29.14■■■□□ 2.26
NKX2-1-204ENST00000522719 ZNF174Q15697 407 aa29.14■■■□□ 2.26
NKX2-1-204ENST00000522719 Q4G0T1 1027 aa29.14■■■□□ 2.26
NKX2-1-204ENST00000522719 OLFML2BQ68BL8 750 aa29.14■■■□□ 2.26
NKX2-1-204ENST00000522719 DDX25Q9UHL0 483 aaKnown RBP29.14■■■□□ 2.26
NKX2-1-204ENST00000522719 UBIAD1Q9Y5Z9 338 aa29.14■■■□□ 2.26
NKX2-1-204ENST00000522719 SYNGAP1Q96PV0 1343 aa29.14■■■□□ 2.25
NKX2-1-204ENST00000522719 FAM86B1E9PN63 330 aa29.13■■■□□ 2.25
NKX2-1-204ENST00000522719 TDP2O95551 362 aa29.13■■■□□ 2.25
NKX2-1-204ENST00000522719 FAM86B2P0C5J1 330 aa29.13■■■□□ 2.25
NKX2-1-204ENST00000522719 NASPP49321 788 aaPredicted RBP29.13■■■□□ 2.25
NKX2-1-204ENST00000522719 PRMT2P55345 433 aa29.13■■■□□ 2.25
NKX2-1-204ENST00000522719 SF3A1Q15459 793 aaKnown RBP29.13■■■□□ 2.25
NKX2-1-204ENST00000522719 CLEC17AQ6ZS10 378 aa29.13■■■□□ 2.25
NKX2-1-204ENST00000522719 ARMCX2Q7L311 632 aa29.13■■■□□ 2.25
NKX2-1-204ENST00000522719 TINF2Q9BSI4 451 aa29.13■■■□□ 2.25
NKX2-1-204ENST00000522719 TFIP11Q9UBB9 837 aaKnown RBP29.13■■■□□ 2.25
NKX2-1-204ENST00000522719 GABRQQ9UN88 632 aa29.13■■■□□ 2.25
NKX2-1-204ENST00000522719 CLIC4Q9Y696 253 aa29.13■■■□□ 2.25
NKX2-1-204ENST00000522719 CEP350Q5VT06 3117 aa29.13■■■□□ 2.25
NKX2-1-204ENST00000522719 PCNTO95613 3336 aa29.13■■■□□ 2.25
NKX2-1-204ENST00000522719 MEIS1O00470 390 aa29.12■■■□□ 2.25
NKX2-1-204ENST00000522719 SETQ01105 290 aaPredicted RBP29.12■■■□□ 2.25
NKX2-1-204ENST00000522719 PRKCZQ05513 592 aa29.12■■■□□ 2.25
NKX2-1-204ENST00000522719 IRF5Q13568 498 aa29.12■■■□□ 2.25
NKX2-1-204ENST00000522719 TRMT44Q8IYL2 757 aaKnown RBP29.12■■■□□ 2.25
NKX2-1-204ENST00000522719 INPP4AQ96PE3 977 aaPredicted RBP29.12■■■□□ 2.25
NKX2-1-204ENST00000522719 IGLV3-22A0A075B6J6 115 aa29.11■■■□□ 2.25
NKX2-1-204ENST00000522719 LAD1O00515 517 aa29.11■■■□□ 2.25
NKX2-1-204ENST00000522719 MAFGO15525 162 aa29.11■■■□□ 2.25
NKX2-1-204ENST00000522719 NEMFO60524 1076 aa29.11■■■□□ 2.25
NKX2-1-204ENST00000522719 YEATS4O95619 227 aa29.11■■■□□ 2.25
NKX2-1-204ENST00000522719 NLRX1Q86UT6 975 aa29.11■■■□□ 2.25
NKX2-1-204ENST00000522719 GPRASP2Q96D09 838 aa29.11■■■□□ 2.25
NKX2-1-204ENST00000522719 SCAND2PQ9GZW5 306 aaPredicted RBP29.11■■■□□ 2.25
NKX2-1-204ENST00000522719 JADE2Q9NQC1 790 aa29.11■■■□□ 2.25
NKX2-1-204ENST00000522719 ITGB5P18084 799 aa29.11■■■□□ 2.25
NKX2-1-204ENST00000522719 NCLP19338 710 aaKnown RBP29.11■■■□□ 2.25
NKX2-1-204ENST00000522719 CEBPZQ03701 1054 aaKnown RBP29.11■■■□□ 2.25
NKX2-1-204ENST00000522719 GNPTABQ3T906 1256 aa29.11■■■□□ 2.25
NKX2-1-204ENST00000522719 PRR16Q569H4 304 aa29.11■■■□□ 2.25
NKX2-1-204ENST00000522719 PLA2G4DQ86XP0 818 aa29.11■■■□□ 2.25
NKX2-1-204ENST00000522719 LENG9Q96B70 501 aa29.11■■■□□ 2.25
NKX2-1-204ENST00000522719 FTOQ9C0B1 505 aaKnown RBP eCLIP29.11■■■□□ 2.25
NKX2-1-204ENST00000522719 MORC2Q9Y6X9 1032 aaPredicted RBP29.11■■■□□ 2.25
NKX2-1-204ENST00000522719 SLC37A4O43826 429 aa29.1■■■□□ 2.25
NKX2-1-204ENST00000522719 SLC39A14Q15043 492 aa29.1■■■□□ 2.25
NKX2-1-204ENST00000522719 PTPAQ15257 358 aa29.1■■■□□ 2.25
NKX2-1-204ENST00000522719 CYP2W1Q8TAV3 490 aa29.1■■■□□ 2.25
NKX2-1-204ENST00000522719 CDHR1Q96JP9 859 aa29.1■■■□□ 2.25
NKX2-1-204ENST00000522719 TBX3O15119 743 aa29.09■■■□□ 2.25
NKX2-1-204ENST00000522719 IGHA2P01877 340 aa29.09■■■□□ 2.25
NKX2-1-204ENST00000522719 PTGDRQ13258 359 aa29.09■■■□□ 2.25
NKX2-1-204ENST00000522719 LINC00301Q8NCQ3 95 aa29.09■■■□□ 2.25
NKX2-1-204ENST00000522719 ZFP91Q96JP5 570 aaPredicted RBP29.09■■■□□ 2.25
NKX2-1-204ENST00000522719 VTA1Q9NP79 307 aa29.09■■■□□ 2.25
NKX2-1-204ENST00000522719 CDKN2AIPQ9NXV6 580 aaPredicted RBP29.09■■■□□ 2.25
NKX2-1-204ENST00000522719 CNPY2Q9Y2B0 182 aa29.09■■■□□ 2.25
NKX2-1-204ENST00000522719 DDX49Q9Y6V7 483 aaKnown RBP29.09■■■□□ 2.25
NKX2-1-204ENST00000522719 BAG4O95429 457 aaKnown RBP29.08■■■□□ 2.25
NKX2-1-204ENST00000522719 ATP2C1P98194 919 aaPredicted RBP29.08■■■□□ 2.25
NKX2-1-204ENST00000522719 MTMR1Q13613 665 aa29.08■■■□□ 2.25
NKX2-1-204ENST00000522719 STK38Q15208 465 aa29.08■■■□□ 2.25
NKX2-1-204ENST00000522719 POTEDQ86YR6 584 aa29.08■■■□□ 2.25
NKX2-1-204ENST00000522719 C4orf32Q8N8J7 132 aa29.08■■■□□ 2.25
NKX2-1-204ENST00000522719 CHAMP1Q96JM3 812 aa29.08■■■□□ 2.25
NKX2-1-204ENST00000522719 GBP4Q96PP9 640 aa29.08■■■□□ 2.25
NKX2-1-204ENST00000522719 WDR11Q9BZH6 1224 aa29.08■■■□□ 2.25
NKX2-1-204ENST00000522719 ABHD16BQ9H3Z7 469 aa29.08■■■□□ 2.25
NKX2-1-204ENST00000522719 RCOR1Q9UKL0 485 aa29.08■■■□□ 2.25
NKX2-1-204ENST00000522719 RGS20O76081 388 aa29.07■■■□□ 2.24
NKX2-1-204ENST00000522719 SNAI1O95863 264 aaPredicted RBP29.07■■■□□ 2.24
NKX2-1-204ENST00000522719 ICAM3P32942 547 aa29.07■■■□□ 2.24
NKX2-1-204ENST00000522719 CALCRLQ16602 461 aa29.07■■■□□ 2.24
Retrieved 100 of 20,778 RNA–protein pairs in 122.2 ms