RNA–Protein interactions for RNA: ENST00000522658.5

PABPC1-220, Transcript of poly(A) binding protein cytoplasmic 1, humanhuman

TSL 2

Gene PABPC1, Length 736 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PABPC1-220ENST00000522658 PI16Q6UXB8 463 aa7.58□□□□□ -1.2
PABPC1-220ENST00000522658 SH3RF3Q8TEJ3 882 aaPredicted RBP7.58□□□□□ -1.2
PABPC1-220ENST00000522658 EDC3Q96F86 508 aaKnown RBP7.58□□□□□ -1.2
PABPC1-220ENST00000522658 P2RX7Q99572 595 aaKnown RBP7.58□□□□□ -1.2
PABPC1-220ENST00000522658 KRTAP9-2Q9BYQ4 174 aa7.58□□□□□ -1.2
PABPC1-220ENST00000522658 JPH1Q9HDC5 661 aaPredicted RBP7.58□□□□□ -1.2
PABPC1-220ENST00000522658 DNAJB12Q9NXW2 375 aaKnown RBP7.58□□□□□ -1.2
PABPC1-220ENST00000522658 HMG20BQ9P0W2 317 aa7.58□□□□□ -1.2
PABPC1-220ENST00000522658 SAP30BPQ9UHR5 308 aaKnown RBP7.58□□□□□ -1.2
PABPC1-220ENST00000522658 GJD2Q9UKL4 321 aa7.58□□□□□ -1.2
PABPC1-220ENST00000522658 ZBTB21Q9ULJ3 1066 aa7.58□□□□□ -1.2
PABPC1-220ENST00000522658 NOB1Q9ULX3 412 aaKnown RBP7.58□□□□□ -1.2
PABPC1-220ENST00000522658 ATP11BQ9Y2G3 1177 aa7.58□□□□□ -1.2
PABPC1-220ENST00000522658 RABGAP1Q9Y3P9 1069 aa7.58□□□□□ -1.2
PABPC1-220ENST00000522658 ALPK3Q96L96 1907 aa7.58□□□□□ -1.2
PABPC1-220ENST00000522658 KRTAP9-1A8MXZ3 250 aaPredicted RBP7.57□□□□□ -1.2
PABPC1-220ENST00000522658 USP17L15C9J2P7 530 aa7.57□□□□□ -1.2
PABPC1-220ENST00000522658 USP17L13C9JLJ4 530 aa7.57□□□□□ -1.2
PABPC1-220ENST00000522658 USP17L11C9JVI0 530 aa7.57□□□□□ -1.2
PABPC1-220ENST00000522658 USP17L18D6R9N7 530 aa7.57□□□□□ -1.2
PABPC1-220ENST00000522658 USP17L22D6RA61 530 aa7.57□□□□□ -1.2
PABPC1-220ENST00000522658 USP17L17D6RBQ6 530 aa7.57□□□□□ -1.2
PABPC1-220ENST00000522658 USP17L19D6RCP7 530 aa7.57□□□□□ -1.2
PABPC1-220ENST00000522658 USP17L20D6RJB6 530 aa7.57□□□□□ -1.2
PABPC1-220ENST00000522658 IPO8O15397 1037 aaKnown RBP7.57□□□□□ -1.2
PABPC1-220ENST00000522658 GH2P01242 217 aa7.57□□□□□ -1.2
PABPC1-220ENST00000522658 GNAI2P04899 355 aa7.57□□□□□ -1.2
PABPC1-220ENST00000522658 CCND3P30281 292 aaPredicted RBP7.57□□□□□ -1.2
PABPC1-220ENST00000522658 RTP1P59025 263 aa7.57□□□□□ -1.2
PABPC1-220ENST00000522658 USP17L24Q0WX57 530 aa7.57□□□□□ -1.2
PABPC1-220ENST00000522658 MAP3K21Q5TCX8 1036 aa7.57□□□□□ -1.2
PABPC1-220ENST00000522658 DPP9Q86TI2 863 aa7.57□□□□□ -1.2
PABPC1-220ENST00000522658 FOXP4Q8IVH2 680 aaPredicted RBP7.57□□□□□ -1.2
PABPC1-220ENST00000522658 ARRDC4Q8NCT1 418 aa7.57□□□□□ -1.2
PABPC1-220ENST00000522658 NUDT8Q8WV74 236 aa7.57□□□□□ -1.2
PABPC1-220ENST00000522658 DDX20Q9UHI6 824 aaKnown RBP7.57□□□□□ -1.2
PABPC1-220ENST00000522658 RBM19Q9Y4C8 960 aaKnown RBP7.57□□□□□ -1.2
PABPC1-220ENST00000522658 ZNF521Q96K83 1311 aa7.56□□□□□ -1.2
PABPC1-220ENST00000522658 RANBP2P49792 3224 aaKnown RBP7.56□□□□□ -1.2
PABPC1-220ENST00000522658 SLC15A5A6NIM6 579 aa7.56□□□□□ -1.2
PABPC1-220ENST00000522658 DNM1LO00429 736 aa7.56□□□□□ -1.2
PABPC1-220ENST00000522658 MPHOSPH10O00566 681 aaKnown RBP7.56□□□□□ -1.2
PABPC1-220ENST00000522658 IGSF3O75054 1194 aa7.56□□□□□ -1.2
PABPC1-220ENST00000522658 IDH1O75874 414 aaKnown RBP7.56□□□□□ -1.2
PABPC1-220ENST00000522658 MCAMP43121 646 aa7.56□□□□□ -1.2
PABPC1-220ENST00000522658 SLFN5Q08AF3 891 aa7.56□□□□□ -1.2
PABPC1-220ENST00000522658 TBC1D8BQ0IIM8 1120 aa7.56□□□□□ -1.2
PABPC1-220ENST00000522658 PTK7Q13308 1070 aa7.56□□□□□ -1.2
PABPC1-220ENST00000522658 CCINQ13939 588 aa7.56□□□□□ -1.2
PABPC1-220ENST00000522658 CCL14Q16627 93 aa7.56□□□□□ -1.2
PABPC1-220ENST00000522658 CRTC2Q53ET0 693 aaPredicted RBP7.56□□□□□ -1.2
PABPC1-220ENST00000522658 FAM109BQ6ICB4 259 aaPredicted RBP7.56□□□□□ -1.2
PABPC1-220ENST00000522658 PSAPL1Q6NUJ1 521 aa7.56□□□□□ -1.2
PABPC1-220ENST00000522658 SHISA2Q6UWI4 295 aa7.56□□□□□ -1.2
PABPC1-220ENST00000522658 FMR1NBQ8N0W7 255 aaPredicted RBP7.56□□□□□ -1.2
PABPC1-220ENST00000522658 MAFAQ8NHW3 353 aaPredicted RBP7.56□□□□□ -1.2
PABPC1-220ENST00000522658 LPAR1Q92633 364 aa7.56□□□□□ -1.2
PABPC1-220ENST00000522658 GLMNQ92990 594 aa7.56□□□□□ -1.2
PABPC1-220ENST00000522658 SSBP4Q9BWG4 385 aaPredicted RBP7.56□□□□□ -1.2
PABPC1-220ENST00000522658 TANGO6Q9C0B7 1094 aa7.56□□□□□ -1.2
PABPC1-220ENST00000522658 PORCNQ9H237 461 aa7.56□□□□□ -1.2
PABPC1-220ENST00000522658 TXNRD2Q9NNW7 524 aa7.56□□□□□ -1.2
PABPC1-220ENST00000522658 PALD1Q9ULE6 856 aa7.56□□□□□ -1.2
PABPC1-220ENST00000522658 GTF3C5Q9Y5Q8 519 aaPredicted RBP7.56□□□□□ -1.2
PABPC1-220ENST00000522658 POLR3DP05423 398 aaPredicted RBP7.55□□□□□ -1.2
PABPC1-220ENST00000522658 COL6A1P12109 1028 aa7.55□□□□□ -1.2
PABPC1-220ENST00000522658 FOSL2P15408 326 aa7.55□□□□□ -1.2
PABPC1-220ENST00000522658 NFKB1P19838 968 aa7.55□□□□□ -1.2
PABPC1-220ENST00000522658 CYP7A1P22680 504 aa7.55□□□□□ -1.2
PABPC1-220ENST00000522658 IGFBP4P22692 258 aa7.55□□□□□ -1.2
PABPC1-220ENST00000522658 PLS1Q14651 629 aa7.55□□□□□ -1.2
PABPC1-220ENST00000522658 ABCB5Q2M3G0 1257 aa7.55□□□□□ -1.2
PABPC1-220ENST00000522658 CERKLQ49MI3 558 aaPredicted RBP7.55□□□□□ -1.2
PABPC1-220ENST00000522658 ARTNQ5T4W7 220 aa7.55□□□□□ -1.2
PABPC1-220ENST00000522658 TTC6Q86TZ1 520 aa7.55□□□□□ -1.2
PABPC1-220ENST00000522658 AMOTL1Q8IY63 956 aa7.55□□□□□ -1.2
PABPC1-220ENST00000522658 FTSJ3Q8IY81 847 aaKnown RBP7.55□□□□□ -1.2
PABPC1-220ENST00000522658 FRAT1Q92837 279 aaPredicted RBP7.55□□□□□ -1.2
PABPC1-220ENST00000522658 IGFLR1Q9H665 355 aa7.55□□□□□ -1.2
PABPC1-220ENST00000522658 RPAP3Q9H6T3 665 aaPredicted RBP7.55□□□□□ -1.2
PABPC1-220ENST00000522658 SH2D4AQ9H788 454 aa7.55□□□□□ -1.2
PABPC1-220ENST00000522658 SERPINB13Q9UIV8 391 aa7.55□□□□□ -1.2
PABPC1-220ENST00000522658 PEX10O60683 326 aa7.54□□□□□ -1.2
PABPC1-220ENST00000522658 VCAM1P19320 739 aa7.54□□□□□ -1.2
PABPC1-220ENST00000522658 RAC1P63000 192 aa7.54□□□□□ -1.2
PABPC1-220ENST00000522658 NRG1Q02297 640 aaPredicted RBP7.54□□□□□ -1.2
PABPC1-220ENST00000522658 MAP3K12Q12852 859 aa7.54□□□□□ -1.2
PABPC1-220ENST00000522658 MTX1Q13505 466 aa7.54□□□□□ -1.2
PABPC1-220ENST00000522658 TNNI3KQ59H18 835 aa7.54□□□□□ -1.2
PABPC1-220ENST00000522658 CLUAP1Q96AJ1 413 aa7.54□□□□□ -1.2
PABPC1-220ENST00000522658 RNPC3Q96LT9 517 aaKnown RBP7.54□□□□□ -1.2
PABPC1-220ENST00000522658 RBPJLQ9UBG7 517 aa7.54□□□□□ -1.2
PABPC1-220ENST00000522658 FPGT-TNNI3KV9GXZ4 949 aa7.54□□□□□ -1.2
PABPC1-220ENST00000522658 LAMA3Q16787 3333 aa7.54□□□□□ -1.2
PABPC1-220ENST00000522658 COL6A3P12111 3177 aa7.53□□□□□ -1.2
PABPC1-220ENST00000522658 KRTAP9-6A0A140TA67 174 aa7.53□□□□□ -1.2
PABPC1-220ENST00000522658 ZBTB42B2RXF5 422 aa7.53□□□□□ -1.2
PABPC1-220ENST00000522658 MAP3K6O95382 1288 aa7.53□□□□□ -1.2
PABPC1-220ENST00000522658 ADORA2AP29274 412 aa7.53□□□□□ -1.2
PABPC1-220ENST00000522658 CYP2C19P33261 490 aa7.53□□□□□ -1.2
Retrieved 100 of 20,778 RNA–protein pairs in 61.4 ms