RNA–Protein interactions for RNA: ENST00000521944.1

TRAPPC9-212, Transcript of trafficking protein particle complex 9, humanhuman

TSL 3

Gene TRAPPC9, Length 492 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAPPC9-212ENST00000521944 ZXDAP98168 799 aa10.72□□□□□ -0.69
TRAPPC9-212ENST00000521944 CLUL1Q15846 466 aa10.72□□□□□ -0.69
TRAPPC9-212ENST00000521944 PKN1Q16512 942 aa10.72□□□□□ -0.69
TRAPPC9-212ENST00000521944 CCDC158Q5M9N0 1113 aa10.72□□□□□ -0.69
TRAPPC9-212ENST00000521944 IQSEC1Q6DN90 963 aa10.72□□□□□ -0.69
TRAPPC9-212ENST00000521944 FAM117BQ6P1L5 589 aa10.72□□□□□ -0.69
TRAPPC9-212ENST00000521944 EEPD1Q7L9B9 569 aa10.72□□□□□ -0.69
TRAPPC9-212ENST00000521944 FBXO16Q8IX29 292 aaPredicted RBP10.72□□□□□ -0.69
TRAPPC9-212ENST00000521944 ASIC4Q96FT7 647 aa10.72□□□□□ -0.69
TRAPPC9-212ENST00000521944 FSD1Q9BTV5 496 aa10.72□□□□□ -0.69
TRAPPC9-212ENST00000521944 SLC38A10Q9HBR0 1119 aa10.72□□□□□ -0.69
TRAPPC9-212ENST00000521944 GPR108Q9NPR9 543 aa10.72□□□□□ -0.69
TRAPPC9-212ENST00000521944 CXCL10P02778 98 aa10.71□□□□□ -0.69
TRAPPC9-212ENST00000521944 EPC2Q52LR7 807 aa10.71□□□□□ -0.69
TRAPPC9-212ENST00000521944 EP400NLQ6ZTU2 488 aa10.71□□□□□ -0.69
TRAPPC9-212ENST00000521944 PRPF38AQ8NAV1 312 aaKnown RBP10.71□□□□□ -0.69
TRAPPC9-212ENST00000521944 RETREG2Q8NC44 543 aa10.71□□□□□ -0.69
TRAPPC9-212ENST00000521944 CHST13Q8NET6 341 aa10.71□□□□□ -0.69
TRAPPC9-212ENST00000521944 NAV1Q8NEY1 1877 aa10.71□□□□□ -0.69
TRAPPC9-212ENST00000521944 DHX38Q92620 1227 aaKnown RBP10.71□□□□□ -0.69
TRAPPC9-212ENST00000521944 PURBQ96QR8 312 aaKnown RBP10.71□□□□□ -0.69
TRAPPC9-212ENST00000521944 KANSL2Q9H9L4 492 aa10.71□□□□□ -0.69
TRAPPC9-212ENST00000521944 A1CFQ9NQ94 594 aaKnown RBP10.71□□□□□ -0.69
TRAPPC9-212ENST00000521944 CLDND1Q9NY35 253 aa10.71□□□□□ -0.69
TRAPPC9-212ENST00000521944 SWAP70Q9UH65 585 aa10.71□□□□□ -0.69
TRAPPC9-212ENST00000521944 FAM50BQ9Y247 325 aa10.71□□□□□ -0.69
TRAPPC9-212ENST00000521944 MAGEB6P1A0A0J9YX57 407 aa10.7□□□□□ -0.7
TRAPPC9-212ENST00000521944 H3BNC9 293 aa10.7□□□□□ -0.7
TRAPPC9-212ENST00000521944 PRKAB2O43741 272 aa10.7□□□□□ -0.7
TRAPPC9-212ENST00000521944 NDUFB10O96000 172 aa10.7□□□□□ -0.7
TRAPPC9-212ENST00000521944 HTRA4P83105 476 aaPredicted RBP10.7□□□□□ -0.7
TRAPPC9-212ENST00000521944 G3BP1Q13283 466 aaKnown RBP eCLIP10.7□□□□□ -0.7
TRAPPC9-212ENST00000521944 DUSP28Q4G0W2 176 aa10.7□□□□□ -0.7
TRAPPC9-212ENST00000521944 TIGD5Q53EQ6 642 aa10.7□□□□□ -0.7
TRAPPC9-212ENST00000521944 NFRKBQ6P4R8 1299 aa10.7□□□□□ -0.7
TRAPPC9-212ENST00000521944 TRAF7Q6Q0C0 670 aa10.7□□□□□ -0.7
TRAPPC9-212ENST00000521944 LIN28BQ6ZN17 250 aaKnown RBP eCLIP10.7□□□□□ -0.7
TRAPPC9-212ENST00000521944 RPAINQ86UA6 219 aa10.7□□□□□ -0.7
TRAPPC9-212ENST00000521944 SUGP1Q8IWZ8 645 aaKnown RBP10.7□□□□□ -0.7
TRAPPC9-212ENST00000521944 LCORLQ8N3X6 602 aa10.7□□□□□ -0.7
TRAPPC9-212ENST00000521944 CCDC17Q96LX7 622 aa10.7□□□□□ -0.7
TRAPPC9-212ENST00000521944 GOPCQ9HD26 462 aa10.7□□□□□ -0.7
TRAPPC9-212ENST00000521944 PLA2G2EQ9NZK7 142 aa10.7□□□□□ -0.7
TRAPPC9-212ENST00000521944 NOB1Q9ULX3 412 aaKnown RBP10.7□□□□□ -0.7
TRAPPC9-212ENST00000521944 HDAC5Q9UQL6 1122 aa10.7□□□□□ -0.7
TRAPPC9-212ENST00000521944 ATG2AQ2TAZ0 1938 aa10.7□□□□□ -0.7
TRAPPC9-212ENST00000521944 USP24Q9UPU5 2620 aa10.69□□□□□ -0.7
TRAPPC9-212ENST00000521944 ABHD14A-ACY1A0A1B0GW23 586 aa10.69□□□□□ -0.7
TRAPPC9-212ENST00000521944 ASB14A6NK59 587 aa10.69□□□□□ -0.7
TRAPPC9-212ENST00000521944 F5H6K3 240 aa10.69□□□□□ -0.7
TRAPPC9-212ENST00000521944 RAD21O60216 631 aa10.69□□□□□ -0.7
TRAPPC9-212ENST00000521944 TBX10O75333 385 aa10.69□□□□□ -0.7
TRAPPC9-212ENST00000521944 MYL3P08590 195 aa10.69□□□□□ -0.7
TRAPPC9-212ENST00000521944 GTF2F1P35269 517 aaKnown RBP eCLIP10.69□□□□□ -0.7
TRAPPC9-212ENST00000521944 NBL1P41271 181 aa10.69□□□□□ -0.7
TRAPPC9-212ENST00000521944 KLRC3Q07444 240 aa10.69□□□□□ -0.7
TRAPPC9-212ENST00000521944 HYAL1Q12794 435 aa10.69□□□□□ -0.7
TRAPPC9-212ENST00000521944 BFSP2Q13515 415 aa10.69□□□□□ -0.7
TRAPPC9-212ENST00000521944 MBTPS1Q14703 1052 aa10.69□□□□□ -0.7
TRAPPC9-212ENST00000521944 SLFNL1Q499Z3 407 aa10.69□□□□□ -0.7
TRAPPC9-212ENST00000521944 FAM47CQ5HY64 1035 aa10.69□□□□□ -0.7
TRAPPC9-212ENST00000521944 C12orf60Q5U649 245 aa10.69□□□□□ -0.7
TRAPPC9-212ENST00000521944 CNKSR3Q6P9H4 555 aa10.69□□□□□ -0.7
TRAPPC9-212ENST00000521944 KIAA1211Q6ZU35 1233 aa10.69□□□□□ -0.7
TRAPPC9-212ENST00000521944 RDH13Q8NBN7 331 aa10.69□□□□□ -0.7
TRAPPC9-212ENST00000521944 MORC4Q8TE76 937 aa10.69□□□□□ -0.7
TRAPPC9-212ENST00000521944 MTG1Q9BT17 334 aaPredicted RBP10.69□□□□□ -0.7
TRAPPC9-212ENST00000521944 NSUN3Q9H649 340 aaKnown RBP10.69□□□□□ -0.7
TRAPPC9-212ENST00000521944 GPCPD1Q9NPB8 672 aa10.69□□□□□ -0.7
TRAPPC9-212ENST00000521944 HOMER2Q9NSB8 354 aa10.69□□□□□ -0.7
TRAPPC9-212ENST00000521944 FBXO40Q9UH90 709 aa10.69□□□□□ -0.7
TRAPPC9-212ENST00000521944 CTNNA3Q9UI47 895 aa10.69□□□□□ -0.7
TRAPPC9-212ENST00000521944 TCRBV5S4A2TA0A5A2 114 aa10.68□□□□□ -0.7
TRAPPC9-212ENST00000521944 DDX11L8A8MPP1 907 aa10.68□□□□□ -0.7
TRAPPC9-212ENST00000521944 LOC730098B7Z3J9 87 aa10.68□□□□□ -0.7
TRAPPC9-212ENST00000521944 STXBP3O00186 592 aa10.68□□□□□ -0.7
TRAPPC9-212ENST00000521944 ZBED4O75132 1171 aa10.68□□□□□ -0.7
TRAPPC9-212ENST00000521944 PDGFBP01127 241 aaPredicted RBP10.68□□□□□ -0.7
TRAPPC9-212ENST00000521944 CFHP08603 1231 aa10.68□□□□□ -0.7
TRAPPC9-212ENST00000521944 PDE6AP16499 860 aa10.68□□□□□ -0.7
TRAPPC9-212ENST00000521944 CBX2Q14781 532 aaPredicted RBP10.68□□□□□ -0.7
TRAPPC9-212ENST00000521944 PTPROQ16827 1216 aa10.68□□□□□ -0.7
TRAPPC9-212ENST00000521944 LRRFIP1Q32MZ4 808 aaKnown RBP10.68□□□□□ -0.7
TRAPPC9-212ENST00000521944 ALDH1L2Q3SY69 923 aa10.68□□□□□ -0.7
TRAPPC9-212ENST00000521944 C16orf86Q6ZW13 317 aa10.68□□□□□ -0.7
TRAPPC9-212ENST00000521944 KIFC2Q96AC6 838 aa10.68□□□□□ -0.7
TRAPPC9-212ENST00000521944 EAF2Q96CJ1 260 aaPredicted RBP10.68□□□□□ -0.7
TRAPPC9-212ENST00000521944 POP1Q99575 1024 aaKnown RBP10.68□□□□□ -0.7
TRAPPC9-212ENST00000521944 CRNKL1Q9BZJ0 848 aaKnown RBP10.68□□□□□ -0.7
TRAPPC9-212ENST00000521944 CCDC8Q9H0W5 538 aaPredicted RBP10.68□□□□□ -0.7
TRAPPC9-212ENST00000521944 POLR3EQ9NVU0 708 aa10.68□□□□□ -0.7
TRAPPC9-212ENST00000521944 INSL6Q9Y581 213 aa10.68□□□□□ -0.7
TRAPPC9-212ENST00000521944 LCTP09848 1927 aa10.68□□□□□ -0.7
TRAPPC9-212ENST00000521944 MYH8P13535 1937 aa10.68□□□□□ -0.7
TRAPPC9-212ENST00000521944 FASNP49327 2511 aaKnown RBP10.67□□□□□ -0.7
TRAPPC9-212ENST00000521944 MICAL3Q7RTP6 2002 aa10.67□□□□□ -0.7
TRAPPC9-212ENST00000521944 BAZ2AQ9UIF9 1905 aaKnown RBP10.67□□□□□ -0.7
TRAPPC9-212ENST00000521944 USP17L12C9JPN9 530 aa10.67□□□□□ -0.7
TRAPPC9-212ENST00000521944 USP17L21D6R901 530 aa10.67□□□□□ -0.7
TRAPPC9-212ENST00000521944 LINC01565O15544 149 aa10.67□□□□□ -0.7
Retrieved 100 of 20,778 RNA–protein pairs in 20.6 ms