RNA–Protein interactions for RNA: ENST00000521399.5

SNHG6-205, Transcript of small nucleolar RNA host gene 6, humanhuman

TSL 2

Gene SNHG6, Length 302 nt, Biotype lincRNA, Subcellular localisation Cytoplasm, Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNHG6-205ENST00000521399 VAT1LQ9HCJ6 419 aa23.7■■□□□ 1.38
SNHG6-205ENST00000521399 CTNNA3Q9UI47 895 aa23.7■■□□□ 1.38
SNHG6-205ENST00000521399 DHX16O60231 1041 aaKnown RBP23.69■■□□□ 1.38
SNHG6-205ENST00000521399 CA3P07451 260 aa23.69■■□□□ 1.38
SNHG6-205ENST00000521399 ARHGEF16Q5VV41 709 aa23.69■■□□□ 1.38
SNHG6-205ENST00000521399 KAT2BQ92831 832 aa23.69■■□□□ 1.38
SNHG6-205ENST00000521399 CNNM2Q9H8M5 875 aa23.69■■□□□ 1.38
SNHG6-205ENST00000521399 CASTP20810 708 aaKnown RBP23.68■■□□□ 1.38
SNHG6-205ENST00000521399 CHST3Q7LGC8 479 aa23.68■■□□□ 1.38
SNHG6-205ENST00000521399 CCDC155Q8N6L0 562 aa23.68■■□□□ 1.38
SNHG6-205ENST00000521399 CAGE1Q8TC20 777 aa23.68■■□□□ 1.38
SNHG6-205ENST00000521399 CTAGE1Q96RT6 745 aa23.68■■□□□ 1.38
SNHG6-205ENST00000521399 UBAC1Q9BSL1 405 aa23.68■■□□□ 1.38
SNHG6-205ENST00000521399 DDX41Q9UJV9 622 aaKnown RBP23.68■■□□□ 1.38
SNHG6-205ENST00000521399 EIF3JO75822 258 aaKnown RBP23.67■■□□□ 1.38
SNHG6-205ENST00000521399 EIF2AK2P19525 551 aaKnown RBP23.67■■□□□ 1.38
SNHG6-205ENST00000521399 GDF6Q6KF10 455 aaPredicted RBP23.67■■□□□ 1.38
SNHG6-205ENST00000521399 AFAP1L1Q8TED9 768 aa23.67■■□□□ 1.38
SNHG6-205ENST00000521399 TSPYL2Q9H2G4 693 aaPredicted RBP23.67■■□□□ 1.38
SNHG6-205ENST00000521399 PXMP2Q9NR77 195 aa23.67■■□□□ 1.38
SNHG6-205ENST00000521399 MYH7BA7E2Y1 1941 aa23.67■■□□□ 1.38
SNHG6-205ENST00000521399 BAIAP3O94812 1187 aa23.66■■□□□ 1.38
SNHG6-205ENST00000521399 CFBP00751 764 aa23.66■■□□□ 1.38
SNHG6-205ENST00000521399 NR3C2P08235 984 aa23.66■■□□□ 1.38
SNHG6-205ENST00000521399 POU3F3P20264 500 aaPredicted RBP23.66■■□□□ 1.38
SNHG6-205ENST00000521399 DGKDQ16760 1214 aa23.66■■□□□ 1.38
SNHG6-205ENST00000521399 IFIT1BQ5T764 474 aaKnown RBP23.66■■□□□ 1.38
SNHG6-205ENST00000521399 HERC6Q8IVU3 1022 aa23.66■■□□□ 1.38
SNHG6-205ENST00000521399 MICALL1Q8N3F8 863 aa23.66■■□□□ 1.38
SNHG6-205ENST00000521399 STAG2Q8N3U4 1231 aa23.66■■□□□ 1.38
SNHG6-205ENST00000521399 ADAMTS19Q8TE59 1207 aa23.66■■□□□ 1.38
SNHG6-205ENST00000521399 EMID1Q96A84 441 aaPredicted RBP23.66■■□□□ 1.38
SNHG6-205ENST00000521399 AMNQ9BXJ7 453 aa23.66■■□□□ 1.38
SNHG6-205ENST00000521399 RFXAPO00287 272 aa23.65■■□□□ 1.38
SNHG6-205ENST00000521399 OPLAHO14841 1288 aa23.65■■□□□ 1.38
SNHG6-205ENST00000521399 HSD17B4P51659 736 aa23.65■■□□□ 1.38
SNHG6-205ENST00000521399 GHRHRQ02643 423 aa23.65■■□□□ 1.38
SNHG6-205ENST00000521399 EXOC6Q8TAG9 804 aa23.65■■□□□ 1.38
SNHG6-205ENST00000521399 CERS4Q9HA82 394 aa23.65■■□□□ 1.38
SNHG6-205ENST00000521399 GTF2IRD1Q9UHL9 959 aa23.65■■□□□ 1.38
SNHG6-205ENST00000521399 MRVI1Q9Y6F6 885 aa23.65■■□□□ 1.38
SNHG6-205ENST00000521399 KIF28PB7ZC32 967 aa23.64■■□□□ 1.37
SNHG6-205ENST00000521399 SELPP16109 830 aa23.64■■□□□ 1.37
SNHG6-205ENST00000521399 TAP1Q03518 808 aa23.64■■□□□ 1.37
SNHG6-205ENST00000521399 RBL2Q08999 1139 aa23.64■■□□□ 1.37
SNHG6-205ENST00000521399 LAMC2Q13753 1193 aa23.64■■□□□ 1.37
SNHG6-205ENST00000521399 GPNMBQ14956 572 aa23.64■■□□□ 1.37
SNHG6-205ENST00000521399 SEC23AQ15436 765 aa23.64■■□□□ 1.37
SNHG6-205ENST00000521399 DHX38Q92620 1227 aaKnown RBP23.64■■□□□ 1.37
SNHG6-205ENST00000521399 MTMR8Q96EF0 704 aa23.64■■□□□ 1.37
SNHG6-205ENST00000521399 IL25Q9H293 177 aa23.64■■□□□ 1.37
SNHG6-205ENST00000521399 MTCH2Q9Y6C9 303 aa23.64■■□□□ 1.37
SNHG6-205ENST00000521399 PTPRSQ13332 1948 aa23.63■■□□□ 1.37
SNHG6-205ENST00000521399 EPOPA6NHQ4 379 aa23.63■■□□□ 1.37
SNHG6-205ENST00000521399 KLRF2D3W0D1 207 aa23.63■■□□□ 1.37
SNHG6-205ENST00000521399 C7orf31Q8N865 590 aa23.63■■□□□ 1.37
SNHG6-205ENST00000521399 IL27Q8NEV9 243 aa23.63■■□□□ 1.37
SNHG6-205ENST00000521399 PPTC7Q8NI37 304 aa23.63■■□□□ 1.37
SNHG6-205ENST00000521399 UHRF1Q96T88 793 aaPredicted RBP23.63■■□□□ 1.37
SNHG6-205ENST00000521399 MAP3K20Q9NYL2 800 aaKnown RBP23.63■■□□□ 1.37
SNHG6-205ENST00000521399 HDAC6Q9UBN7 1215 aa23.63■■□□□ 1.37
SNHG6-205ENST00000521399 MAD2L2Q9UI95 211 aa23.63■■□□□ 1.37
SNHG6-205ENST00000521399 BAZ2BQ9UIF8 2168 aaKnown RBP23.63■■□□□ 1.37
SNHG6-205ENST00000521399 TCF20Q9UGU0 1960 aaKnown RBP23.63■■□□□ 1.37
SNHG6-205ENST00000521399 ZBTB5O15062 677 aa23.62■■□□□ 1.37
SNHG6-205ENST00000521399 GTPBP6O43824 516 aaPredicted RBP23.62■■□□□ 1.37
SNHG6-205ENST00000521399 PPP1R11O60927 126 aaPredicted RBP23.62■■□□□ 1.37
SNHG6-205ENST00000521399 ARHGEF15O94989 841 aa23.62■■□□□ 1.37
SNHG6-205ENST00000521399 PARNO95453 639 aaKnown RBP23.62■■□□□ 1.37
SNHG6-205ENST00000521399 KCNJ6P48051 423 aa23.62■■□□□ 1.37
SNHG6-205ENST00000521399 PSEN2P49810 448 aa23.62■■□□□ 1.37
SNHG6-205ENST00000521399 STOX1Q6ZVD7 989 aa23.62■■□□□ 1.37
SNHG6-205ENST00000521399 CYB5R4Q7L1T6 521 aa23.62■■□□□ 1.37
SNHG6-205ENST00000521399 LRRC8DQ7L1W4 858 aa23.62■■□□□ 1.37
SNHG6-205ENST00000521399 DHX37Q8IY37 1157 aaKnown RBP23.62■■□□□ 1.37
SNHG6-205ENST00000521399 PDCD2LQ9BRP1 358 aa23.62■■□□□ 1.37
SNHG6-205ENST00000521399 KATNAL1Q9BW62 490 aa23.62■■□□□ 1.37
SNHG6-205ENST00000521399 HAS3O00219 553 aa23.61■■□□□ 1.37
SNHG6-205ENST00000521399 RGS20O76081 388 aa23.61■■□□□ 1.37
SNHG6-205ENST00000521399 F2P00734 622 aa23.61■■□□□ 1.37
SNHG6-205ENST00000521399 CKBP12277 381 aa23.61■■□□□ 1.37
SNHG6-205ENST00000521399 WDR5P61964 334 aaKnown RBP23.61■■□□□ 1.37
SNHG6-205ENST00000521399 MFSD10Q14728 455 aa23.61■■□□□ 1.37
SNHG6-205ENST00000521399 SAMD3Q8N6K7 520 aa23.61■■□□□ 1.37
SNHG6-205ENST00000521399 ARNTL2Q8WYA1 636 aa23.61■■□□□ 1.37
SNHG6-205ENST00000521399 ALG1Q9BT22 464 aa23.61■■□□□ 1.37
SNHG6-205ENST00000521399 PCDHA1Q9Y5I3 950 aa23.61■■□□□ 1.37
SNHG6-205ENST00000521399 PALM3A6NDB9 673 aaPredicted RBP23.6■■□□□ 1.37
SNHG6-205ENST00000521399 TLL1O43897 1013 aa23.6■■□□□ 1.37
SNHG6-205ENST00000521399 CXCL10P02778 98 aa23.6■■□□□ 1.37
SNHG6-205ENST00000521399 ZNF286BP0CG31 522 aa23.6■■□□□ 1.37
SNHG6-205ENST00000521399 HOXD8P13378 290 aaPredicted RBP23.6■■□□□ 1.37
SNHG6-205ENST00000521399 KIAA0753Q2KHM9 967 aa23.6■■□□□ 1.37
SNHG6-205ENST00000521399 CNKSR3Q6P9H4 555 aa23.6■■□□□ 1.37
SNHG6-205ENST00000521399 KCNV1Q6PIU1 500 aa23.6■■□□□ 1.37
SNHG6-205ENST00000521399 NBNO60934 754 aa23.59■■□□□ 1.37
SNHG6-205ENST00000521399 PPFIA4O75335 1185 aa23.59■■□□□ 1.37
SNHG6-205ENST00000521399 MYCLP12524 364 aaPredicted RBP23.59■■□□□ 1.37
SNHG6-205ENST00000521399 HOXA13P31271 388 aaPredicted RBP23.59■■□□□ 1.37
SNHG6-205ENST00000521399 TFF2Q03403 129 aa23.59■■□□□ 1.37
Retrieved 100 of 20,778 RNA–protein pairs in 53.7 ms