RNA–Protein interactions for RNA: ENST00000520755.5

LSM1-203, Transcript of LSM1 homolog, mRNA degradation associated, humanhuman

TSL 1 (best) BASIC

Gene LSM1, Length 975 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LSM1-203ENST00000520755 WNT7AO00755 349 aa17.49■□□□□ 0.39
LSM1-203ENST00000520755 EDIL3O43854 480 aa17.49■□□□□ 0.39
LSM1-203ENST00000520755 MYCLP12524 364 aaPredicted RBP17.49■□□□□ 0.39
LSM1-203ENST00000520755 CYBAP13498 195 aa17.49■□□□□ 0.39
LSM1-203ENST00000520755 CCL5P13501 91 aa17.49■□□□□ 0.39
LSM1-203ENST00000520755 CNGA1P29973 690 aa17.49■□□□□ 0.39
LSM1-203ENST00000520755 CCND3P30281 292 aaPredicted RBP17.49■□□□□ 0.39
LSM1-203ENST00000520755 SAFBQ15424 915 aaKnown RBP eCLIP17.49■□□□□ 0.39
LSM1-203ENST00000520755 MCTP1Q6DN14 999 aa17.49■□□□□ 0.39
LSM1-203ENST00000520755 EEPD1Q7L9B9 569 aa17.49■□□□□ 0.39
LSM1-203ENST00000520755 NOSTRINQ8IVI9 506 aa17.49■□□□□ 0.39
LSM1-203ENST00000520755 TEX2Q8IWB9 1127 aa17.49■□□□□ 0.39
LSM1-203ENST00000520755 TRPV1Q8NER1 839 aa17.49■□□□□ 0.39
LSM1-203ENST00000520755 ABHD8Q96I13 439 aa17.49■□□□□ 0.39
LSM1-203ENST00000520755 PDCD2LQ9BRP1 358 aa17.49■□□□□ 0.39
LSM1-203ENST00000520755 ANO3Q9BYT9 981 aa17.49■□□□□ 0.39
LSM1-203ENST00000520755 BRMS1Q9HCU9 246 aa17.49■□□□□ 0.39
LSM1-203ENST00000520755 HMX1Q9NP08 348 aaPredicted RBP17.49■□□□□ 0.39
LSM1-203ENST00000520755 CHMP5Q9NZZ3 219 aa17.49■□□□□ 0.39
LSM1-203ENST00000520755 LOC102724159A0A0B4J2E5 919 aa17.48■□□□□ 0.39
LSM1-203ENST00000520755 NR3C2P08235 984 aa17.48■□□□□ 0.39
LSM1-203ENST00000520755 EDNRBP24530 442 aa17.48■□□□□ 0.39
LSM1-203ENST00000520755 NUCB2P80303 420 aa17.48■□□□□ 0.39
LSM1-203ENST00000520755 AP3B2Q13367 1082 aa17.48■□□□□ 0.39
LSM1-203ENST00000520755 ACVR2BQ13705 512 aa17.48■□□□□ 0.39
LSM1-203ENST00000520755 PGM5Q15124 567 aa17.48■□□□□ 0.39
LSM1-203ENST00000520755 PWP2Q15269 919 aaKnown RBP17.48■□□□□ 0.39
LSM1-203ENST00000520755 FAM173BQ6P4H8 233 aa17.48■□□□□ 0.39
LSM1-203ENST00000520755 FBXO16Q8IX29 292 aaPredicted RBP17.48■□□□□ 0.39
LSM1-203ENST00000520755 IL31RAQ8NI17 732 aa17.48■□□□□ 0.39
LSM1-203ENST00000520755 MORC4Q8TE76 937 aa17.48■□□□□ 0.39
LSM1-203ENST00000520755 CRYGNQ8WXF5 182 aa17.48■□□□□ 0.39
LSM1-203ENST00000520755 IWS1Q96ST2 819 aa17.48■□□□□ 0.39
LSM1-203ENST00000520755 XRN2Q9H0D6 950 aaKnown RBP eCLIP17.48■□□□□ 0.39
LSM1-203ENST00000520755 RNF208Q9H0X6 261 aa17.48■□□□□ 0.39
LSM1-203ENST00000520755 ABHD16BQ9H3Z7 469 aa17.48■□□□□ 0.39
LSM1-203ENST00000520755 ZNF865P0CJ78 1059 aaPredicted RBP17.47■□□□□ 0.39
LSM1-203ENST00000520755 PDIA4P13667 645 aaKnown RBP17.47■□□□□ 0.39
LSM1-203ENST00000520755 PIK3AP1Q6ZUJ8 805 aa17.47■□□□□ 0.39
LSM1-203ENST00000520755 KRT25Q7Z3Z0 450 aa17.47■□□□□ 0.39
LSM1-203ENST00000520755 CHAMP1Q96JM3 812 aa17.47■□□□□ 0.39
LSM1-203ENST00000520755 ZFP91Q96JP5 570 aaPredicted RBP17.47■□□□□ 0.39
LSM1-203ENST00000520755 KATNBL1Q9H079 304 aa17.47■□□□□ 0.39
LSM1-203ENST00000520755 EHMT1Q9H9B1 1298 aa17.47■□□□□ 0.39
LSM1-203ENST00000520755 NRBP1Q9UHY1 535 aa17.47■□□□□ 0.39
LSM1-203ENST00000520755 WDR81Q562E7 1941 aa17.47■□□□□ 0.39
LSM1-203ENST00000520755 FOSP01100 380 aaPredicted RBP17.46■□□□□ 0.39
LSM1-203ENST00000520755 CCND2P30279 289 aa17.46■□□□□ 0.39
LSM1-203ENST00000520755 STXBP2Q15833 593 aa17.46■□□□□ 0.39
LSM1-203ENST00000520755 VTA1Q9NP79 307 aa17.46■□□□□ 0.39
LSM1-203ENST00000520755 CCDC194A0A1B0GVG4 234 aa17.45■□□□□ 0.38
LSM1-203ENST00000520755 SEPT4O43236 478 aa17.45■□□□□ 0.38
LSM1-203ENST00000520755 SREBF1P36956 1147 aa17.45■□□□□ 0.38
LSM1-203ENST00000520755 TOB1P50616 345 aaPredicted RBP17.45■□□□□ 0.38
LSM1-203ENST00000520755 NONOQ15233 471 aaKnown RBP eCLIP17.45■□□□□ 0.38
LSM1-203ENST00000520755 INF2Q27J81 1249 aa17.45■□□□□ 0.38
LSM1-203ENST00000520755 CCDC144BQ3MJ40 725 aa17.45■□□□□ 0.38
LSM1-203ENST00000520755 MYSM1Q5VVJ2 828 aa17.45■□□□□ 0.38
LSM1-203ENST00000520755 ANO1Q5XXA6 986 aa17.45■□□□□ 0.38
LSM1-203ENST00000520755 BRAPQ7Z569 592 aa17.45■□□□□ 0.38
LSM1-203ENST00000520755 TBCKQ8TEA7 893 aa17.45■□□□□ 0.38
LSM1-203ENST00000520755 DEFB118Q96PH6 123 aa17.45■□□□□ 0.38
LSM1-203ENST00000520755 TMEM106CQ9BVX2 250 aa17.45■□□□□ 0.38
LSM1-203ENST00000520755 ZSCAN16Q9H4T2 348 aaPredicted RBP17.45■□□□□ 0.38
LSM1-203ENST00000520755 PDGFCQ9NRA1 345 aa17.45■□□□□ 0.38
LSM1-203ENST00000520755 BRCA2P51587 3418 aa17.44■□□□□ 0.38
LSM1-203ENST00000520755 CCDC85CA6NKD9 419 aa17.44■□□□□ 0.38
LSM1-203ENST00000520755 EIF3JO75822 258 aaKnown RBP17.44■□□□□ 0.38
LSM1-203ENST00000520755 AKR1A1P14550 325 aa17.44■□□□□ 0.38
LSM1-203ENST00000520755 ADCYAP1R1P41586 468 aa17.44■□□□□ 0.38
LSM1-203ENST00000520755 GNL2Q13823 731 aaKnown RBP17.44■□□□□ 0.38
LSM1-203ENST00000520755 NBR1Q14596 966 aa17.44■□□□□ 0.38
LSM1-203ENST00000520755 PCNX4Q63HM2 1172 aa17.44■□□□□ 0.38
LSM1-203ENST00000520755 MCTP2Q6DN12 878 aa17.44■□□□□ 0.38
LSM1-203ENST00000520755 SEPT14Q6ZU15 432 aa17.44■□□□□ 0.38
LSM1-203ENST00000520755 VSIG10LQ86VR7 867 aa17.44■□□□□ 0.38
LSM1-203ENST00000520755 PAK6Q9NQU5 681 aaPredicted RBP17.44■□□□□ 0.38
LSM1-203ENST00000520755 RTEL1Q9NZ71 1219 aa17.44■□□□□ 0.38
LSM1-203ENST00000520755 DDX20Q9UHI6 824 aaKnown RBP17.44■□□□□ 0.38
LSM1-203ENST00000520755 FAM184BQ9ULE4 1060 aa17.44■□□□□ 0.38
LSM1-203ENST00000520755 MRPS9P82933 396 aaKnown RBP17.43■□□□□ 0.38
LSM1-203ENST00000520755 ARHGAP4P98171 946 aa17.43■□□□□ 0.38
LSM1-203ENST00000520755 TAPT1Q6NXT6 567 aa17.43■□□□□ 0.38
LSM1-203ENST00000520755 LENG1Q96BZ8 264 aaPredicted RBP17.43■□□□□ 0.38
LSM1-203ENST00000520755 FTOQ9C0B1 505 aaKnown RBP eCLIP17.43■□□□□ 0.38
LSM1-203ENST00000520755 C11orf97A0A1B0GVM6 126 aaPredicted RBP17.42■□□□□ 0.38
LSM1-203ENST00000520755 FOXD4L6Q3SYB3 417 aaPredicted RBP17.42■□□□□ 0.38
LSM1-203ENST00000520755 FOXD4L3Q6VB84 417 aaPredicted RBP17.42■□□□□ 0.38
LSM1-203ENST00000520755 NEK8Q86SG6 692 aa17.42■□□□□ 0.38
LSM1-203ENST00000520755 TNPO1Q92973 898 aaKnown RBP17.42■□□□□ 0.38
LSM1-203ENST00000520755 ADCY6O43306 1168 aa17.41■□□□□ 0.38
LSM1-203ENST00000520755 MSCO60682 206 aa17.41■□□□□ 0.38
LSM1-203ENST00000520755 TDP2O95551 362 aa17.41■□□□□ 0.38
LSM1-203ENST00000520755 GJB1P08034 283 aa17.41■□□□□ 0.38
LSM1-203ENST00000520755 CYP3A4P08684 503 aa17.41■□□□□ 0.38
LSM1-203ENST00000520755 RARBP10826 455 aa17.41■□□□□ 0.38
LSM1-203ENST00000520755 TNFAIP2Q03169 654 aa17.41■□□□□ 0.38
LSM1-203ENST00000520755 TMEM63BQ5T3F8 832 aa17.41■□□□□ 0.38
LSM1-203ENST00000520755 XRRA1Q6P2D8 792 aa17.41■□□□□ 0.38
LSM1-203ENST00000520755 U2AF1L4Q8WU68 220 aaKnown RBP17.41■□□□□ 0.38
Retrieved 100 of 20,778 RNA–protein pairs in 28.1 ms