RNA–Protein interactions for RNA: ENST00000520497.1

VAPB-206, Transcript of VAMP associated protein B and C, humanhuman

TSL 2

Gene VAPB, Length 937 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VAPB-206ENST00000520497 NAP1L4Q99733 375 aaKnown RBP9.68□□□□□ -0.86
VAPB-206ENST00000520497 MOV10L1Q9BXT6 1211 aaKnown RBP9.68□□□□□ -0.86
VAPB-206ENST00000520497 TMEM60Q9H2L4 133 aa9.68□□□□□ -0.86
VAPB-206ENST00000520497 ACAD9Q9H845 621 aa9.68□□□□□ -0.86
VAPB-206ENST00000520497 ZCCHC17Q9NP64 241 aaKnown RBP9.68□□□□□ -0.86
VAPB-206ENST00000520497 MRVI1Q9Y6F6 885 aa9.68□□□□□ -0.86
VAPB-206ENST00000520497 ARID2Q68CP9 1835 aa9.68□□□□□ -0.86
VAPB-206ENST00000520497 GOLGA6L3A6NEY3 463 aa9.67□□□□□ -0.86
VAPB-206ENST00000520497 IGF2BP3O00425 579 aaKnown RBP eCLIP9.67□□□□□ -0.86
VAPB-206ENST00000520497 NEMFO60524 1076 aa9.67□□□□□ -0.86
VAPB-206ENST00000520497 SLC25A27O95847 323 aa9.67□□□□□ -0.86
VAPB-206ENST00000520497 LIG1P18858 919 aa9.67□□□□□ -0.86
VAPB-206ENST00000520497 COPB2P35606 906 aa9.67□□□□□ -0.86
VAPB-206ENST00000520497 ERVK-9P63128 1117 aa9.67□□□□□ -0.86
VAPB-206ENST00000520497 ERVK-24P63145 666 aa9.67□□□□□ -0.86
VAPB-206ENST00000520497 GRIN1Q05586 938 aa9.67□□□□□ -0.86
VAPB-206ENST00000520497 PLS1Q14651 629 aa9.67□□□□□ -0.86
VAPB-206ENST00000520497 CCDC183Q5T5S1 534 aa9.67□□□□□ -0.86
VAPB-206ENST00000520497 RESP18Q5W5W9 173 aa9.67□□□□□ -0.86
VAPB-206ENST00000520497 SHC4Q6S5L8 630 aa9.67□□□□□ -0.86
VAPB-206ENST00000520497 RNF207Q6ZRF8 634 aa9.67□□□□□ -0.86
VAPB-206ENST00000520497 FCHSD1Q86WN1 690 aa9.67□□□□□ -0.86
VAPB-206ENST00000520497 ENGASEQ8NFI3 743 aa9.67□□□□□ -0.86
VAPB-206ENST00000520497 CCDC102AQ96A19 550 aa9.67□□□□□ -0.86
VAPB-206ENST00000520497 LENG9Q96B70 501 aa9.67□□□□□ -0.86
VAPB-206ENST00000520497 CLIC6Q96NY7 704 aa9.67□□□□□ -0.86
VAPB-206ENST00000520497 MTMR9Q96QG7 549 aa9.67□□□□□ -0.86
VAPB-206ENST00000520497 PAGR1Q9BTK6 254 aa9.67□□□□□ -0.86
VAPB-206ENST00000520497 GOLPH3LQ9H4A5 285 aa9.67□□□□□ -0.86
VAPB-206ENST00000520497 EHMT1Q9H9B1 1298 aa9.67□□□□□ -0.86
VAPB-206ENST00000520497 A1CFQ9NQ94 594 aaKnown RBP9.67□□□□□ -0.86
VAPB-206ENST00000520497 DDX19AQ9NUU7 478 aaKnown RBP9.67□□□□□ -0.86
VAPB-206ENST00000520497 CYP39A1Q9NYL5 469 aa9.67□□□□□ -0.86
VAPB-206ENST00000520497 MORF4L1Q9UBU8 362 aa9.67□□□□□ -0.86
VAPB-206ENST00000520497 FBXO40Q9UH90 709 aa9.67□□□□□ -0.86
VAPB-206ENST00000520497 PFASO15067 1338 aa9.66□□□□□ -0.86
VAPB-206ENST00000520497 IGLV3-22A0A075B6J6 115 aa9.66□□□□□ -0.86
VAPB-206ENST00000520497 FAM86B1E9PN63 330 aa9.66□□□□□ -0.86
VAPB-206ENST00000520497 FAM86B2P0C5J1 330 aa9.66□□□□□ -0.86
VAPB-206ENST00000520497 OR52Z1P0C646 297 aa9.66□□□□□ -0.86
VAPB-206ENST00000520497 ERCC3P19447 782 aa9.66□□□□□ -0.86
VAPB-206ENST00000520497 CMA1P23946 247 aa9.66□□□□□ -0.86
VAPB-206ENST00000520497 GCLCP48506 637 aaPredicted RBP9.66□□□□□ -0.86
VAPB-206ENST00000520497 INHBEP58166 350 aa9.66□□□□□ -0.86
VAPB-206ENST00000520497 SNW1Q13573 536 aaKnown RBP9.66□□□□□ -0.86
VAPB-206ENST00000520497 IL17AQ16552 155 aa9.66□□□□□ -0.86
VAPB-206ENST00000520497 Q3C1V9 767 aa9.66□□□□□ -0.86
VAPB-206ENST00000520497 Q4G0T1 1027 aa9.66□□□□□ -0.86
VAPB-206ENST00000520497 NSMFQ6X4W1 530 aa9.66□□□□□ -0.86
VAPB-206ENST00000520497 CCAR1Q8IX12 1150 aaKnown RBP9.66□□□□□ -0.86
VAPB-206ENST00000520497 SHCBP1Q8NEM2 672 aa9.66□□□□□ -0.86
VAPB-206ENST00000520497 SMCR8Q8TEV9 937 aaPredicted RBP9.66□□□□□ -0.86
VAPB-206ENST00000520497 MRPS27Q92552 414 aaKnown RBP9.66□□□□□ -0.86
VAPB-206ENST00000520497 TAAR1Q96RJ0 339 aa9.66□□□□□ -0.86
VAPB-206ENST00000520497 PARK7Q99497 189 aaKnown RBP9.66□□□□□ -0.86
VAPB-206ENST00000520497 KCNMB3Q9NPA1 279 aa9.66□□□□□ -0.86
VAPB-206ENST00000520497 DDX25Q9UHL0 483 aaKnown RBP9.66□□□□□ -0.86
VAPB-206ENST00000520497 HPSEQ9Y251 543 aa9.66□□□□□ -0.86
VAPB-206ENST00000520497 TBX3O15119 743 aa9.65□□□□□ -0.86
VAPB-206ENST00000520497 NR1I2O75469 434 aa9.65□□□□□ -0.86
VAPB-206ENST00000520497 LONP1P36776 959 aaKnown RBP9.65□□□□□ -0.86
VAPB-206ENST00000520497 ZNF445P59923 1031 aa9.65□□□□□ -0.86
VAPB-206ENST00000520497 FAM160A1Q05DH4 1040 aa9.65□□□□□ -0.86
VAPB-206ENST00000520497 BAATQ14032 418 aaPredicted RBP9.65□□□□□ -0.86
VAPB-206ENST00000520497 PGM5Q15124 567 aa9.65□□□□□ -0.86
VAPB-206ENST00000520497 CALCRLQ16602 461 aa9.65□□□□□ -0.86
VAPB-206ENST00000520497 FAM110CQ1W6H9 321 aa9.65□□□□□ -0.86
VAPB-206ENST00000520497 ZSCAN23Q3MJ62 389 aa9.65□□□□□ -0.86
VAPB-206ENST00000520497 PCNX4Q63HM2 1172 aa9.65□□□□□ -0.86
VAPB-206ENST00000520497 IFNL1Q8IU54 200 aa9.65□□□□□ -0.86
VAPB-206ENST00000520497 FMR1NBQ8N0W7 255 aaPredicted RBP9.65□□□□□ -0.86
VAPB-206ENST00000520497 FSIP1Q8NA03 581 aa9.65□□□□□ -0.86
VAPB-206ENST00000520497 IL31RAQ8NI17 732 aa9.65□□□□□ -0.86
VAPB-206ENST00000520497 ETNPPLQ8TBG4 499 aa9.65□□□□□ -0.86
VAPB-206ENST00000520497 HAS1Q92839 578 aa9.65□□□□□ -0.86
VAPB-206ENST00000520497 RMDN3Q96TC7 470 aa9.65□□□□□ -0.86
VAPB-206ENST00000520497 PDCD2LQ9BRP1 358 aa9.65□□□□□ -0.86
VAPB-206ENST00000520497 CSRNP2Q9H175 543 aa9.65□□□□□ -0.86
VAPB-206ENST00000520497 R3HDMLQ9H3Y0 253 aa9.65□□□□□ -0.86
VAPB-206ENST00000520497 PXMP2Q9NR77 195 aa9.65□□□□□ -0.86
VAPB-206ENST00000520497 TMEM63CQ9P1W3 806 aa9.65□□□□□ -0.86
VAPB-206ENST00000520497 ASTN1O14525 1302 aa9.64□□□□□ -0.87
VAPB-206ENST00000520497 A0A1B0GVL5 298 aa9.64□□□□□ -0.87
VAPB-206ENST00000520497 VWA3AA6NCI4 1184 aa9.64□□□□□ -0.87
VAPB-206ENST00000520497 CTAGE5O15320 804 aa9.64□□□□□ -0.87
VAPB-206ENST00000520497 CA12O43570 354 aa9.64□□□□□ -0.87
VAPB-206ENST00000520497 KINO60870 393 aaKnown RBP9.64□□□□□ -0.87
VAPB-206ENST00000520497 TBC1D8O95759 1140 aa9.64□□□□□ -0.87
VAPB-206ENST00000520497 BCRP11274 1271 aa9.64□□□□□ -0.87
VAPB-206ENST00000520497 PFKFB1P16118 471 aa9.64□□□□□ -0.87
VAPB-206ENST00000520497 TM4SF4P48230 202 aa9.64□□□□□ -0.87
VAPB-206ENST00000520497 NDUFA8P51970 172 aa9.64□□□□□ -0.87
VAPB-206ENST00000520497 UBXN2AP68543 259 aa9.64□□□□□ -0.87
VAPB-206ENST00000520497 MRPS9P82933 396 aaKnown RBP9.64□□□□□ -0.87
VAPB-206ENST00000520497 SREBF2Q12772 1141 aa9.64□□□□□ -0.87
VAPB-206ENST00000520497 TPRNQ4KMQ1 711 aa9.64□□□□□ -0.87
VAPB-206ENST00000520497 CEP55Q53EZ4 464 aa9.64□□□□□ -0.87
VAPB-206ENST00000520497 XRRA1Q6P2D8 792 aa9.64□□□□□ -0.87
VAPB-206ENST00000520497 DTHD1Q6ZMT9 781 aa9.64□□□□□ -0.87
VAPB-206ENST00000520497 NIPA1Q7RTP0 329 aa9.64□□□□□ -0.87
Retrieved 100 of 20,778 RNA–protein pairs in 19.6 ms