RNA–Protein interactions for RNA: ENST00000520267.5

COL13A1-213, Transcript of collagen type XIII alpha 1 chain, humanhuman

APPRIS ALT2 TSL 5 BASIC

Gene COL13A1, Length 2,276 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL13A1-213ENST00000520267 EHHADHQ08426 723 aa28.71■■■□□ 2.19
COL13A1-213ENST00000520267 TBC1D8BQ0IIM8 1120 aa28.71■■■□□ 2.19
COL13A1-213ENST00000520267 SUPT20HQ8NEM7 779 aa28.71■■■□□ 2.19
COL13A1-213ENST00000520267 DNAJC7Q99615 494 aa28.71■■■□□ 2.19
COL13A1-213ENST00000520267 AMNQ9BXJ7 453 aa28.71■■■□□ 2.19
COL13A1-213ENST00000520267 LRRC27Q9C0I9 530 aa28.71■■■□□ 2.19
COL13A1-213ENST00000520267 CC2D2BQ6DHV5 1058 aa28.7■■■□□ 2.18
COL13A1-213ENST00000520267 CSRNP1Q96S65 589 aa28.7■■■□□ 2.18
COL13A1-213ENST00000520267 SLF1Q9BQI6 1058 aa28.7■■■□□ 2.18
COL13A1-213ENST00000520267 NOC4LQ9BVI4 516 aaKnown RBP28.7■■■□□ 2.18
COL13A1-213ENST00000520267 KCNMB3Q9NPA1 279 aa28.7■■■□□ 2.18
COL13A1-213ENST00000520267 KIF5CO60282 957 aa28.69■■■□□ 2.18
COL13A1-213ENST00000520267 IKQ13123 557 aaPredicted RBP28.69■■■□□ 2.18
COL13A1-213ENST00000520267 HYIQ5T013 277 aa28.69■■■□□ 2.18
COL13A1-213ENST00000520267 GUF1Q8N442 669 aaKnown RBP28.69■■■□□ 2.18
COL13A1-213ENST00000520267 UBXN4Q92575 508 aa28.69■■■□□ 2.18
COL13A1-213ENST00000520267 DNAJC19Q96DA6 116 aa28.69■■■□□ 2.18
COL13A1-213ENST00000520267 CYP3A7-CYP3A51PA0A087WV96 503 aa28.69■■■□□ 2.18
COL13A1-213ENST00000520267 TAL1P17542 331 aaPredicted RBP28.69■■■□□ 2.18
COL13A1-213ENST00000520267 CYP3A7P24462 503 aa28.69■■■□□ 2.18
COL13A1-213ENST00000520267 USH1GQ495M9 461 aa28.69■■■□□ 2.18
COL13A1-213ENST00000520267 ARHGAP29Q52LW3 1261 aa28.69■■■□□ 2.18
COL13A1-213ENST00000520267 SYDE2Q5VT97 1194 aa28.69■■■□□ 2.18
COL13A1-213ENST00000520267 GLIS3Q8NEA6 775 aa28.69■■■□□ 2.18
COL13A1-213ENST00000520267 MBOAT7Q96N66 472 aa28.69■■■□□ 2.18
COL13A1-213ENST00000520267 FEZ1Q99689 392 aa28.69■■■□□ 2.18
COL13A1-213ENST00000520267 TTYH3Q9C0H2 523 aa28.69■■■□□ 2.18
COL13A1-213ENST00000520267 PSME4Q14997 1843 aa28.69■■■□□ 2.18
COL13A1-213ENST00000520267 A0A1W2PRG0 241 aa28.68■■■□□ 2.18
COL13A1-213ENST00000520267 WDR59Q6PJI9 974 aa28.68■■■□□ 2.18
COL13A1-213ENST00000520267 FBXO11Q86XK2 927 aa28.68■■■□□ 2.18
COL13A1-213ENST00000520267 EFCAB8A8MWE9 144 aa28.68■■■□□ 2.18
COL13A1-213ENST00000520267 BMP3P12645 472 aa28.68■■■□□ 2.18
COL13A1-213ENST00000520267 ARHGAP25P42331 645 aa28.68■■■□□ 2.18
COL13A1-213ENST00000520267 AP3B2Q13367 1082 aa28.68■■■□□ 2.18
COL13A1-213ENST00000520267 LRRC41Q15345 812 aa28.68■■■□□ 2.18
COL13A1-213ENST00000520267 ZNF569Q5MCW4 686 aa28.68■■■□□ 2.18
COL13A1-213ENST00000520267 CRYGNQ8WXF5 182 aa28.68■■■□□ 2.18
COL13A1-213ENST00000520267 AGPAT5Q9NUQ2 364 aa28.68■■■□□ 2.18
COL13A1-213ENST00000520267 COL2A1P02458 1487 aaPredicted RBP28.67■■■□□ 2.18
COL13A1-213ENST00000520267 E9PMD0 336 aa28.67■■■□□ 2.18
COL13A1-213ENST00000520267 H2AFXP16104 143 aaPredicted RBP28.67■■■□□ 2.18
COL13A1-213ENST00000520267 EN1Q05925 392 aaPredicted RBP28.67■■■□□ 2.18
COL13A1-213ENST00000520267 REXO2Q9Y3B8 237 aaKnown RBP28.67■■■□□ 2.18
COL13A1-213ENST00000520267 EPN1Q9Y6I3 576 aaPredicted RBP28.67■■■□□ 2.18
COL13A1-213ENST00000520267 GOLGB1Q14789 3259 aaKnown RBP28.67■■■□□ 2.18
COL13A1-213ENST00000520267 KDM3AQ9Y4C1 1321 aa28.67■■■□□ 2.18
COL13A1-213ENST00000520267 TCP10L2B9ZVM9 353 aa28.67■■■□□ 2.18
COL13A1-213ENST00000520267 ARHGAP4P98171 946 aa28.67■■■□□ 2.18
COL13A1-213ENST00000520267 PPP2R3AQ06190 1150 aa28.67■■■□□ 2.18
COL13A1-213ENST00000520267 PSMD2Q13200 908 aa28.67■■■□□ 2.18
COL13A1-213ENST00000520267 STK32BQ9NY57 414 aa28.67■■■□□ 2.18
COL13A1-213ENST00000520267 KIAA1024Q9UPX6 916 aa28.67■■■□□ 2.18
COL13A1-213ENST00000520267 NDUFA10O95299 355 aa28.66■■■□□ 2.18
COL13A1-213ENST00000520267 STAT3P40763 770 aa28.66■■■□□ 2.18
COL13A1-213ENST00000520267 NT5C3AQ9H0P0 336 aa28.66■■■□□ 2.18
COL13A1-213ENST00000520267 SSBP05455 408 aaKnown RBP eCLIP28.66■■■□□ 2.18
COL13A1-213ENST00000520267 TRIM21P19474 475 aaKnown RBP28.66■■■□□ 2.18
COL13A1-213ENST00000520267 COASYQ13057 564 aa28.66■■■□□ 2.18
COL13A1-213ENST00000520267 NUP58Q9BVL2 599 aa28.66■■■□□ 2.18
COL13A1-213ENST00000520267 XPO5Q9HAV4 1204 aaKnown RBP eCLIP28.66■■■□□ 2.18
COL13A1-213ENST00000520267 DDX41Q9UJV9 622 aaKnown RBP28.66■■■□□ 2.18
COL13A1-213ENST00000520267 POTEB3A0JP26 581 aa28.65■■■□□ 2.18
COL13A1-213ENST00000520267 POTECB2RU33 542 aa28.65■■■□□ 2.18
COL13A1-213ENST00000520267 POTEBQ6S5H4 581 aa28.65■■■□□ 2.18
COL13A1-213ENST00000520267 MOXD1Q6UVY6 613 aa28.65■■■□□ 2.18
COL13A1-213ENST00000520267 SPICE1Q8N0Z3 855 aa28.65■■■□□ 2.18
COL13A1-213ENST00000520267 CLRN2A0PK11 232 aa28.64■■■□□ 2.18
COL13A1-213ENST00000520267 SLC35F6Q8N357 371 aa28.64■■■□□ 2.18
COL13A1-213ENST00000520267 RETREG2Q8NC44 543 aa28.64■■■□□ 2.18
COL13A1-213ENST00000520267 PCMTD1Q96MG8 357 aaPredicted RBP28.64■■■□□ 2.18
COL13A1-213ENST00000520267 ERGIC2Q96RQ1 377 aa28.64■■■□□ 2.18
COL13A1-213ENST00000520267 CAMKK2Q96RR4 588 aa28.64■■■□□ 2.18
COL13A1-213ENST00000520267 PANK4Q9NVE7 773 aa28.64■■■□□ 2.18
COL13A1-213ENST00000520267 TSR1Q2NL82 804 aaKnown RBP28.64■■■□□ 2.18
COL13A1-213ENST00000520267 BTNL9Q6UXG8 535 aa28.64■■■□□ 2.18
COL13A1-213ENST00000520267 SMCHD1A6NHR9 2005 aa28.64■■■□□ 2.17
COL13A1-213ENST00000520267 SPDYE2BA6NHP3 402 aa28.63■■■□□ 2.17
COL13A1-213ENST00000520267 SPDYE6P0CI01 402 aa28.63■■■□□ 2.17
COL13A1-213ENST00000520267 LRRC63Q05C16 580 aa28.63■■■□□ 2.17
COL13A1-213ENST00000520267 MEA1Q16626 185 aa28.63■■■□□ 2.17
COL13A1-213ENST00000520267 PRR16Q569H4 304 aa28.63■■■□□ 2.17
COL13A1-213ENST00000520267 RSBN1LQ6PCB5 846 aaPredicted RBP28.63■■■□□ 2.17
COL13A1-213ENST00000520267 SLFN12Q8IYM2 578 aa28.63■■■□□ 2.17
COL13A1-213ENST00000520267 ETNPPLQ8TBG4 499 aa28.63■■■□□ 2.17
COL13A1-213ENST00000520267 PDGFDQ9GZP0 370 aaPredicted RBP28.63■■■□□ 2.17
COL13A1-213ENST00000520267 OGFRQ9NZT2 677 aa28.63■■■□□ 2.17
COL13A1-213ENST00000520267 OPLAHO14841 1288 aa28.63■■■□□ 2.17
COL13A1-213ENST00000520267 MED24O75448 989 aa28.63■■■□□ 2.17
COL13A1-213ENST00000520267 RAD17O75943 681 aa28.63■■■□□ 2.17
COL13A1-213ENST00000520267 PLA2G4BP0C869 781 aa28.63■■■□□ 2.17
COL13A1-213ENST00000520267 ECE1P42892 770 aa28.63■■■□□ 2.17
COL13A1-213ENST00000520267 MMP14P50281 582 aa28.63■■■□□ 2.17
COL13A1-213ENST00000520267 FKBP15Q5T1M5 1219 aa28.63■■■□□ 2.17
COL13A1-213ENST00000520267 VWA3BQ502W6 1294 aa28.62■■■□□ 2.17
COL13A1-213ENST00000520267 LRRC55Q6ZSA7 311 aa28.62■■■□□ 2.17
COL13A1-213ENST00000520267 ZNF446Q9NWS9 450 aa28.62■■■□□ 2.17
COL13A1-213ENST00000520267 TMOD2Q9NZR1 351 aa28.62■■■□□ 2.17
COL13A1-213ENST00000520267 HERC5Q9UII4 1024 aaKnown RBP28.62■■■□□ 2.17
COL13A1-213ENST00000520267 PRR12Q9ULL5 1215 aa28.62■■■□□ 2.17
Retrieved 100 of 20,778 RNA–protein pairs in 30.3 ms