RNA–Protein interactions for RNA: ENST00000519894.1

FBXO28-204, Transcript of F-box protein 28, humanhuman

TSL 2

Gene FBXO28, Length 729 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
FBXO28-204ENST00000519894 C9orf50Q5SZB4 431 aa17.29■□□□□ 0.36
FBXO28-204ENST00000519894 DHX32Q7L7V1 743 aaKnown RBP17.29■□□□□ 0.36
FBXO28-204ENST00000519894 CMTR1Q8N1G2 835 aaKnown RBP17.29■□□□□ 0.36
FBXO28-204ENST00000519894 KCNB2Q92953 911 aa17.29■□□□□ 0.36
FBXO28-204ENST00000519894 TCEANC2Q96MN5 208 aa17.29■□□□□ 0.36
FBXO28-204ENST00000519894 POLR3EQ9NVU0 708 aa17.29■□□□□ 0.36
FBXO28-204ENST00000519894 SLC12A7Q9Y666 1083 aa17.29■□□□□ 0.36
FBXO28-204ENST00000519894 KIAA1217Q5T5P2 1943 aa17.29■□□□□ 0.36
FBXO28-204ENST00000519894 A6NJR5 290 aa17.28■□□□□ 0.36
FBXO28-204ENST00000519894 TLR3O15455 904 aaKnown RBP17.28■□□□□ 0.36
FBXO28-204ENST00000519894 TIMP1P01033 207 aa17.28■□□□□ 0.36
FBXO28-204ENST00000519894 MYL3P08590 195 aa17.28■□□□□ 0.36
FBXO28-204ENST00000519894 EPHB4P54760 987 aa17.28■□□□□ 0.36
FBXO28-204ENST00000519894 PGM5Q15124 567 aa17.28■□□□□ 0.36
FBXO28-204ENST00000519894 FANCBQ8NB91 859 aa17.28■□□□□ 0.36
FBXO28-204ENST00000519894 RRP36Q96EU6 259 aaKnown RBP17.28■□□□□ 0.36
FBXO28-204ENST00000519894 SEZ6LQ9BYH1 1024 aa17.28■□□□□ 0.36
FBXO28-204ENST00000519894 DDX41Q9UJV9 622 aaKnown RBP17.28■□□□□ 0.36
FBXO28-204ENST00000519894 MYCLP12524 364 aaPredicted RBP17.27■□□□□ 0.36
FBXO28-204ENST00000519894 KRT32Q14532 448 aa17.27■□□□□ 0.36
FBXO28-204ENST00000519894 VSIG10LQ86VR7 867 aa17.27■□□□□ 0.36
FBXO28-204ENST00000519894 FCHSD1Q86WN1 690 aa17.27■□□□□ 0.36
FBXO28-204ENST00000519894 IL31RAQ8NI17 732 aa17.27■□□□□ 0.36
FBXO28-204ENST00000519894 DNAH12Q6ZR08 3092 aa17.26■□□□□ 0.35
FBXO28-204ENST00000519894 RGS20O76081 388 aa17.26■□□□□ 0.35
FBXO28-204ENST00000519894 GH1P01241 217 aa17.26■□□□□ 0.35
FBXO28-204ENST00000519894 HSPA4P34932 840 aa17.26■□□□□ 0.35
FBXO28-204ENST00000519894 ARHGAP1Q07960 439 aa17.26■□□□□ 0.35
FBXO28-204ENST00000519894 BRDTQ58F21 947 aaPredicted RBP17.26■□□□□ 0.35
FBXO28-204ENST00000519894 APOA5Q6Q788 366 aa17.26■□□□□ 0.35
FBXO28-204ENST00000519894 TMTC3Q6ZXV5 915 aa17.26■□□□□ 0.35
FBXO28-204ENST00000519894 MICU3Q86XE3 530 aa17.26■□□□□ 0.35
FBXO28-204ENST00000519894 MTG1Q9BT17 334 aaPredicted RBP17.26■□□□□ 0.35
FBXO28-204ENST00000519894 BRPF3Q9ULD4 1205 aa17.26■□□□□ 0.35
FBXO28-204ENST00000519894 B4GALT4O60513 344 aa17.25■□□□□ 0.35
FBXO28-204ENST00000519894 KPNA6O60684 536 aa17.25■□□□□ 0.35
FBXO28-204ENST00000519894 FPGSQ05932 587 aa17.25■□□□□ 0.35
FBXO28-204ENST00000519894 MFSD5Q6N075 450 aa17.25■□□□□ 0.35
FBXO28-204ENST00000519894 GPR153Q6NV75 609 aa17.25■□□□□ 0.35
FBXO28-204ENST00000519894 SYNE3Q6ZMZ3 975 aa17.25■□□□□ 0.35
FBXO28-204ENST00000519894 CCDC82Q8N4S0 544 aa17.25■□□□□ 0.35
FBXO28-204ENST00000519894 AFG1LQ8WV93 481 aa17.25■□□□□ 0.35
FBXO28-204ENST00000519894 ZFP91Q96JP5 570 aaPredicted RBP17.25■□□□□ 0.35
FBXO28-204ENST00000519894 PPP1R12CQ9BZL4 782 aa17.25■□□□□ 0.35
FBXO28-204ENST00000519894 TRPV6Q9H1D0 765 aa17.25■□□□□ 0.35
FBXO28-204ENST00000519894 PPP4R2Q9NY27 417 aa17.25■□□□□ 0.35
FBXO28-204ENST00000519894 SEC63Q9UGP8 760 aaKnown RBP17.25■□□□□ 0.35
FBXO28-204ENST00000519894 SNX14Q9Y5W7 946 aa17.25■□□□□ 0.35
FBXO28-204ENST00000519894 MRVI1Q9Y6F6 885 aa17.25■□□□□ 0.35
FBXO28-204ENST00000519894 RANBP2P49792 3224 aaKnown RBP17.25■□□□□ 0.35
FBXO28-204ENST00000519894 SCN10AQ9Y5Y9 1956 aa17.24■□□□□ 0.35
FBXO28-204ENST00000519894 hCG_1642624A0A1W2PR95 340 aa17.24■□□□□ 0.35
FBXO28-204ENST00000519894 MMP3P08254 477 aa17.24■□□□□ 0.35
FBXO28-204ENST00000519894 CPA1P15085 419 aa17.24■□□□□ 0.35
FBXO28-204ENST00000519894 NBPF20Q3BBV1 942 aa17.24■□□□□ 0.35
FBXO28-204ENST00000519894 USP17L6PQ6QN14 398 aa17.24■□□□□ 0.35
FBXO28-204ENST00000519894 PPP1R13LQ8WUF5 828 aa17.24■□□□□ 0.35
FBXO28-204ENST00000519894 ALDH8A1Q9H2A2 487 aaPredicted RBP17.24■□□□□ 0.35
FBXO28-204ENST00000519894 FRMPD4Q14CM0 1322 aa17.23■□□□□ 0.35
FBXO28-204ENST00000519894 MEIS2O14770 477 aa17.23■□□□□ 0.35
FBXO28-204ENST00000519894 HMGB1P09429 215 aaKnown RBP17.23■□□□□ 0.35
FBXO28-204ENST00000519894 CCND2P30279 289 aa17.23■□□□□ 0.35
FBXO28-204ENST00000519894 CYP2C18P33260 490 aa17.23■□□□□ 0.35
FBXO28-204ENST00000519894 EMID1Q96A84 441 aaPredicted RBP17.23■□□□□ 0.35
FBXO28-204ENST00000519894 RBM28Q9NW13 759 aaKnown RBP17.23■□□□□ 0.35
FBXO28-204ENST00000519894 UMODL1Q5DID0 1318 aa17.22■□□□□ 0.35
FBXO28-204ENST00000519894 MYH7BA7E2Y1 1941 aa17.22■□□□□ 0.35
FBXO28-204ENST00000519894 PIK3CDO00329 1044 aa17.22■□□□□ 0.35
FBXO28-204ENST00000519894 ZBTB43O43298 467 aa17.22■□□□□ 0.35
FBXO28-204ENST00000519894 REC8O95072 547 aa17.22■□□□□ 0.35
FBXO28-204ENST00000519894 CSF2RAP15509 400 aa17.22■□□□□ 0.35
FBXO28-204ENST00000519894 MRPS9P82933 396 aaKnown RBP17.22■□□□□ 0.35
FBXO28-204ENST00000519894 SP2Q02086 613 aa17.22■□□□□ 0.35
FBXO28-204ENST00000519894 LAMC2Q13753 1193 aa17.22■□□□□ 0.35
FBXO28-204ENST00000519894 ERICH6BQ5W0A0 696 aa17.22■□□□□ 0.35
FBXO28-204ENST00000519894 C16orf59Q7L2K0 433 aa17.22■□□□□ 0.35
FBXO28-204ENST00000519894 TMEM199Q8N511 208 aa17.22■□□□□ 0.35
FBXO28-204ENST00000519894 SMARCC2Q8TAQ2 1214 aa17.22■□□□□ 0.35
FBXO28-204ENST00000519894 KAT2BQ92831 832 aa17.22■□□□□ 0.35
FBXO28-204ENST00000519894 GPKOWQ92917 476 aaPredicted RBP eCLIP17.22■□□□□ 0.35
FBXO28-204ENST00000519894 CUL5Q93034 780 aa17.22■□□□□ 0.35
FBXO28-204ENST00000519894 JAKMIP1Q96N16 626 aaKnown RBP17.22■□□□□ 0.35
FBXO28-204ENST00000519894 NOC4LQ9BVI4 516 aaKnown RBP17.22■□□□□ 0.35
FBXO28-204ENST00000519894 HIPK3Q9H422 1215 aa17.22■□□□□ 0.35
FBXO28-204ENST00000519894 FAM217BQ9NTX9 383 aaPredicted RBP17.22■□□□□ 0.35
FBXO28-204ENST00000519894 TRMT13Q9NUP7 481 aaKnown RBP17.22■□□□□ 0.35
FBXO28-204ENST00000519894 CNTNAP5Q8WYK1 1306 aa17.21■□□□□ 0.35
FBXO28-204ENST00000519894 KLF18A0A0U1RQI7 1052 aa17.21■□□□□ 0.35
FBXO28-204ENST00000519894 TGFB3P10600 412 aa17.21■□□□□ 0.35
FBXO28-204ENST00000519894 CASTP20810 708 aaKnown RBP17.21■□□□□ 0.35
FBXO28-204ENST00000519894 CDC27P30260 824 aa17.21■□□□□ 0.35
FBXO28-204ENST00000519894 FUT2Q10981 343 aa17.21■□□□□ 0.35
FBXO28-204ENST00000519894 PPIGQ13427 754 aaKnown RBP eCLIP17.21■□□□□ 0.358e-7■■■□□ 14.9
FBXO28-204ENST00000519894 RTN1Q16799 776 aa17.21■□□□□ 0.35
FBXO28-204ENST00000519894 FAM47CQ5HY64 1035 aa17.21■□□□□ 0.35
FBXO28-204ENST00000519894 MYSM1Q5VVJ2 828 aa17.21■□□□□ 0.35
FBXO28-204ENST00000519894 NFRKBQ6P4R8 1299 aa17.21■□□□□ 0.35
FBXO28-204ENST00000519894 KCNV1Q6PIU1 500 aa17.21■□□□□ 0.35
FBXO28-204ENST00000519894 Q6ZUG5 572 aa17.21■□□□□ 0.35
FBXO28-204ENST00000519894 Q7L0L9 218 aa17.21■□□□□ 0.35
Retrieved 100 of 20,778 RNA–protein pairs in 23.4 ms