RNA–Protein interactions for RNA: ENST00000519661.5

SPIDR-212, Transcript of scaffold protein involved in DNA repair, humanhuman

TSL 2

Gene SPIDR, Length 1,035 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SPIDR-212ENST00000519661 CABYRO75952 493 aa13.24□□□□□ -0.29
SPIDR-212ENST00000519661 CTDNEP1O95476 244 aa13.24□□□□□ -0.29
SPIDR-212ENST00000519661 PGK1P00558 417 aa13.24□□□□□ -0.29
SPIDR-212ENST00000519661 CCND2P30279 289 aa13.24□□□□□ -0.29
SPIDR-212ENST00000519661 SREBF1P36956 1147 aa13.24□□□□□ -0.29
SPIDR-212ENST00000519661 ACLYP53396 1101 aa13.24□□□□□ -0.29
SPIDR-212ENST00000519661 NAPAP54920 295 aa13.24□□□□□ -0.29
SPIDR-212ENST00000519661 RABEP1Q15276 862 aa13.24□□□□□ -0.29
SPIDR-212ENST00000519661 NPY5RQ15761 445 aa13.24□□□□□ -0.29
SPIDR-212ENST00000519661 ME3Q16798 604 aa13.24□□□□□ -0.29
SPIDR-212ENST00000519661 GALNT17Q6IS24 598 aa13.24□□□□□ -0.29
SPIDR-212ENST00000519661 CPLX2Q6PUV4 134 aaKnown RBP13.24□□□□□ -0.29
SPIDR-212ENST00000519661 TLK2Q86UE8 772 aa13.24□□□□□ -0.29
SPIDR-212ENST00000519661 CCDC148Q8NFR7 591 aa13.24□□□□□ -0.29
SPIDR-212ENST00000519661 GPKOWQ92917 476 aaPredicted RBP eCLIP13.24□□□□□ -0.29
SPIDR-212ENST00000519661 LENG1Q96BZ8 264 aaPredicted RBP13.24□□□□□ -0.29
SPIDR-212ENST00000519661 TOX2Q96NM4 488 aa13.24□□□□□ -0.29
SPIDR-212ENST00000519661 SPC25Q9HBM1 224 aa13.24□□□□□ -0.29
SPIDR-212ENST00000519661 DNAH12Q6ZR08 3092 aa13.24□□□□□ -0.29
SPIDR-212ENST00000519661 CEP290O15078 2479 aa13.23□□□□□ -0.29
SPIDR-212ENST00000519661 MYADML2A6NDP7 307 aa13.23□□□□□ -0.29
SPIDR-212ENST00000519661 SPATA31C2B4DYI2 1134 aa13.23□□□□□ -0.29
SPIDR-212ENST00000519661 M0R2N6 131 aa13.23□□□□□ -0.29
SPIDR-212ENST00000519661 KPNA6O60684 536 aa13.23□□□□□ -0.29
SPIDR-212ENST00000519661 ARIH2O95376 493 aa13.23□□□□□ -0.29
SPIDR-212ENST00000519661 CYP3A4P08684 503 aa13.23□□□□□ -0.29
SPIDR-212ENST00000519661 EIF2AK2P19525 551 aaKnown RBP13.23□□□□□ -0.29
SPIDR-212ENST00000519661 GNA11P29992 359 aa13.23□□□□□ -0.29
SPIDR-212ENST00000519661 CDK7P50613 346 aa13.23□□□□□ -0.29
SPIDR-212ENST00000519661 ADCY7P51828 1080 aa13.23□□□□□ -0.29
SPIDR-212ENST00000519661 CCT2P78371 535 aaKnown RBP13.23□□□□□ -0.29
SPIDR-212ENST00000519661 ARHGAP1Q07960 439 aa13.23□□□□□ -0.29
SPIDR-212ENST00000519661 FSCN1Q16658 493 aaKnown RBP13.23□□□□□ -0.29
SPIDR-212ENST00000519661 NIPA1Q7RTP0 329 aa13.23□□□□□ -0.29
SPIDR-212ENST00000519661 ANKRD33Q7Z3H0 272 aa13.23□□□□□ -0.29
SPIDR-212ENST00000519661 TRIM22Q8IYM9 498 aa13.23□□□□□ -0.29
SPIDR-212ENST00000519661 SMARCC2Q8TAQ2 1214 aa13.23□□□□□ -0.29
SPIDR-212ENST00000519661 PHKBQ93100 1093 aa13.23□□□□□ -0.29
SPIDR-212ENST00000519661 GPRASP2Q96D09 838 aa13.23□□□□□ -0.29
SPIDR-212ENST00000519661 SLKQ9H2G2 1235 aaPredicted RBP13.23□□□□□ -0.29
SPIDR-212ENST00000519661 LIMCH1Q9UPQ0 1083 aa13.23□□□□□ -0.29
SPIDR-212ENST00000519661 UBIAD1Q9Y5Z9 338 aa13.23□□□□□ -0.29
SPIDR-212ENST00000519661 RANBP2P49792 3224 aaKnown RBP13.22□□□□□ -0.29
SPIDR-212ENST00000519661 KIAA1217Q5T5P2 1943 aa13.22□□□□□ -0.29
SPIDR-212ENST00000519661 A0A1W2PQ45 241 aaPredicted RBP13.22□□□□□ -0.29
SPIDR-212ENST00000519661 A0A1W2PQY0 241 aa13.22□□□□□ -0.29
SPIDR-212ENST00000519661 SMCO2A6NFE2 343 aa13.22□□□□□ -0.29
SPIDR-212ENST00000519661 CPLX1O14810 134 aa13.22□□□□□ -0.29
SPIDR-212ENST00000519661 FIBPO43427 364 aa13.22□□□□□ -0.29
SPIDR-212ENST00000519661 TXNP10599 105 aaKnown RBP13.22□□□□□ -0.29
SPIDR-212ENST00000519661 CPT1AP50416 773 aa13.22□□□□□ -0.29
SPIDR-212ENST00000519661 ST3GAL1Q11201 340 aa13.22□□□□□ -0.29
SPIDR-212ENST00000519661 SEMA3FQ13275 785 aa13.22□□□□□ -0.29
SPIDR-212ENST00000519661 KCNA10Q16322 511 aa13.22□□□□□ -0.29
SPIDR-212ENST00000519661 GNPTABQ3T906 1256 aa13.22□□□□□ -0.29
SPIDR-212ENST00000519661 TMEM63BQ5T3F8 832 aa13.22□□□□□ -0.29
SPIDR-212ENST00000519661 GJC2Q5T442 439 aaPredicted RBP13.22□□□□□ -0.29
SPIDR-212ENST00000519661 PRPF38BQ5VTL8 546 aaKnown RBP13.22□□□□□ -0.29
SPIDR-212ENST00000519661 EEPD1Q7L9B9 569 aa13.22□□□□□ -0.29
SPIDR-212ENST00000519661 BICD2Q8TD16 824 aa13.22□□□□□ -0.29
SPIDR-212ENST00000519661 PIBF1Q8WXW3 757 aa13.22□□□□□ -0.29
SPIDR-212ENST00000519661 CDHR1Q96JP9 859 aa13.22□□□□□ -0.29
SPIDR-212ENST00000519661 LLPHQ9BRT6 129 aaKnown RBP13.22□□□□□ -0.29
SPIDR-212ENST00000519661 UPF2Q9HAU5 1272 aaKnown RBP13.22□□□□□ -0.29
SPIDR-212ENST00000519661 C6orf50Q9HD87 102 aa13.22□□□□□ -0.29
SPIDR-212ENST00000519661 SH2B1Q9NRF2 756 aaPredicted RBP13.22□□□□□ -0.29
SPIDR-212ENST00000519661 PCDHA6Q9UN73 950 aa13.22□□□□□ -0.29
SPIDR-212ENST00000519661 PCDHA8Q9Y5H6 950 aa13.22□□□□□ -0.29
SPIDR-212ENST00000519661 ALPK3Q96L96 1907 aa13.21□□□□□ -0.29
SPIDR-212ENST00000519661 SPDYE3A6NKU9 549 aa13.21□□□□□ -0.29
SPIDR-212ENST00000519661 LARGE1O95461 756 aa13.21□□□□□ -0.29
SPIDR-212ENST00000519661 GH1P01241 217 aa13.21□□□□□ -0.29
SPIDR-212ENST00000519661 ASGR1P07306 291 aa13.21□□□□□ -0.29
SPIDR-212ENST00000519661 C6orf222P0C671 652 aaPredicted RBP13.21□□□□□ -0.29
SPIDR-212ENST00000519661 FDPSP14324 419 aaKnown RBP13.21□□□□□ -0.29
SPIDR-212ENST00000519661 ITGB5P18084 799 aa13.21□□□□□ -0.29
SPIDR-212ENST00000519661 CIITAP33076 1130 aa13.21□□□□□ -0.29
SPIDR-212ENST00000519661 AKAP17AQ02040 695 aaKnown RBP13.21□□□□□ -0.29
SPIDR-212ENST00000519661 SSRP1Q08945 709 aaKnown RBP13.21□□□□□ -0.29
SPIDR-212ENST00000519661 LAMC2Q13753 1193 aa13.21□□□□□ -0.29
SPIDR-212ENST00000519661 LRRC26Q2I0M4 334 aa13.21□□□□□ -0.29
SPIDR-212ENST00000519661 MYSM1Q5VVJ2 828 aa13.21□□□□□ -0.29
SPIDR-212ENST00000519661 ANO1Q5XXA6 986 aa13.21□□□□□ -0.29
SPIDR-212ENST00000519661 SLC39A5Q6ZMH5 540 aa13.21□□□□□ -0.29
SPIDR-212ENST00000519661 FCHSD1Q86WN1 690 aa13.21□□□□□ -0.29
SPIDR-212ENST00000519661 REXO1Q8N1G1 1221 aaKnown RBP13.21□□□□□ -0.29
SPIDR-212ENST00000519661 NSUN7Q8NE18 718 aaKnown RBP13.21□□□□□ -0.29
SPIDR-212ENST00000519661 PPTC7Q8NI37 304 aa13.21□□□□□ -0.29
SPIDR-212ENST00000519661 ZSCAN31Q96LW9 406 aaPredicted RBP13.21□□□□□ -0.29
SPIDR-212ENST00000519661 SLC26A6Q9BXS9 759 aa13.21□□□□□ -0.29
SPIDR-212ENST00000519661 AP5M1Q9H0R1 490 aa13.21□□□□□ -0.29
SPIDR-212ENST00000519661 PRO3102Q9H379 93 aa13.21□□□□□ -0.29
SPIDR-212ENST00000519661 EHMT1Q9H9B1 1298 aa13.21□□□□□ -0.29
SPIDR-212ENST00000519661 SCN10AQ9Y5Y9 1956 aa13.2□□□□□ -0.3
SPIDR-212ENST00000519661 MEIS1O00470 390 aa13.2□□□□□ -0.3
SPIDR-212ENST00000519661 UBA1P22314 1058 aaKnown RBP13.2□□□□□ -0.3
SPIDR-212ENST00000519661 PURAQ00577 322 aaKnown RBP13.2□□□□□ -0.3
SPIDR-212ENST00000519661 UBE2SQ16763 222 aa13.2□□□□□ -0.3
SPIDR-212ENST00000519661 GNASQ5JWF2 1037 aa13.2□□□□□ -0.3
SPIDR-212ENST00000519661 CELF3Q5SZQ8 465 aaKnown RBP13.2□□□□□ -0.3
Retrieved 100 of 20,778 RNA–protein pairs in 61.4 ms