RNA–Protein interactions for RNA: ENST00000519485.1

CSMD3-209, Transcript of CUB and Sushi multiple domains 3, humanhuman

TSL 3

Gene CSMD3, Length 452 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CSMD3-209ENST00000519485 EPHB4P54760 987 aa5.1□□□□□ -1.59
CSMD3-209ENST00000519485 COL9A2Q14055 689 aaPredicted RBP5.1□□□□□ -1.59
CSMD3-209ENST00000519485 ICAM4Q14773 271 aa5.1□□□□□ -1.59
CSMD3-209ENST00000519485 LDLRAD1Q5T700 205 aa5.1□□□□□ -1.59
CSMD3-209ENST00000519485 HEATR6Q6AI08 1181 aaKnown RBP5.1□□□□□ -1.59
CSMD3-209ENST00000519485 RUFY4Q6ZNE9 571 aa5.1□□□□□ -1.59
CSMD3-209ENST00000519485 FAM126BQ8IXS8 530 aa5.1□□□□□ -1.59
CSMD3-209ENST00000519485 ADCY4Q8NFM4 1077 aa5.1□□□□□ -1.59
CSMD3-209ENST00000519485 COPS5Q92905 334 aa5.1□□□□□ -1.59
CSMD3-209ENST00000519485 PCED1AQ9H1Q7 454 aa5.1□□□□□ -1.59
CSMD3-209ENST00000519485 SEMA4AQ9H3S1 761 aa5.1□□□□□ -1.59
CSMD3-209ENST00000519485 SIT1Q9Y3P8 196 aa5.1□□□□□ -1.59
CSMD3-209ENST00000519485 DDX3XO00571 662 aaKnown RBP eCLIP5.09□□□□□ -1.59
CSMD3-209ENST00000519485 SGSM2O43147 1006 aa5.09□□□□□ -1.59
CSMD3-209ENST00000519485 FUCA1P04066 466 aa5.09□□□□□ -1.59
CSMD3-209ENST00000519485 R3HDM1Q15032 1099 aaKnown RBP5.09□□□□□ -1.59
CSMD3-209ENST00000519485 CD300LDQ6UXZ3 194 aa5.09□□□□□ -1.59
CSMD3-209ENST00000519485 RIOX2Q8IUF8 465 aa5.09□□□□□ -1.59
CSMD3-209ENST00000519485 Q8N1Y9 231 aa5.09□□□□□ -1.59
CSMD3-209ENST00000519485 FAM26EQ8N5C1 309 aa5.09□□□□□ -1.59
CSMD3-209ENST00000519485 YTHDC1Q96MU7 727 aaKnown RBP5.09□□□□□ -1.59
CSMD3-209ENST00000519485 SYT3Q9BQG1 590 aa5.09□□□□□ -1.59
CSMD3-209ENST00000519485 PATE3B3GLJ2 98 aa5.08□□□□□ -1.6
CSMD3-209ENST00000519485 GPR42O15529 346 aa5.08□□□□□ -1.6
CSMD3-209ENST00000519485 EPHX1P07099 455 aa5.08□□□□□ -1.6
CSMD3-209ENST00000519485 SLC7A5Q01650 507 aa5.08□□□□□ -1.6
CSMD3-209ENST00000519485 ADAM9Q13443 819 aa5.08□□□□□ -1.6
CSMD3-209ENST00000519485 DPY19L1Q2PZI1 675 aa5.08□□□□□ -1.6
CSMD3-209ENST00000519485 GNPTABQ3T906 1256 aa5.08□□□□□ -1.6
CSMD3-209ENST00000519485 ZFPM1Q8IX07 1006 aa5.08□□□□□ -1.6
CSMD3-209ENST00000519485 ZNF513Q8N8E2 541 aaPredicted RBP5.08□□□□□ -1.6
CSMD3-209ENST00000519485 DPF3Q92784 378 aa5.08□□□□□ -1.6
CSMD3-209ENST00000519485 VPS11Q9H270 941 aa5.08□□□□□ -1.6
CSMD3-209ENST00000519485 PPT2Q9UMR5 302 aa5.08□□□□□ -1.6
CSMD3-209ENST00000519485 TESMINQ9Y4I5 508 aa5.08□□□□□ -1.6
CSMD3-209ENST00000519485 NPEPPSL1A6NEC2 478 aa5.07□□□□□ -1.6
CSMD3-209ENST00000519485 SELENOPP49908 381 aa5.07□□□□□ -1.6
CSMD3-209ENST00000519485 CR1LQ2VPA4 569 aa5.07□□□□□ -1.6
CSMD3-209ENST00000519485 MBLAC2Q68D91 279 aa5.07□□□□□ -1.6
CSMD3-209ENST00000519485 CIR1Q86X95 450 aaPredicted RBP5.07□□□□□ -1.6
CSMD3-209ENST00000519485 KLHL6Q8WZ60 621 aa5.07□□□□□ -1.6
CSMD3-209ENST00000519485 MRRFQ96E11 262 aaKnown RBP5.07□□□□□ -1.6
CSMD3-209ENST00000519485 METTL5Q9NRN9 209 aaKnown RBP5.07□□□□□ -1.6
CSMD3-209ENST00000519485 CYP7B1O75881 506 aa5.06□□□□□ -1.6
CSMD3-209ENST00000519485 PPP2CBP62714 309 aa5.06□□□□□ -1.6
CSMD3-209ENST00000519485 PPP2CAP67775 309 aa5.06□□□□□ -1.6
CSMD3-209ENST00000519485 PURAQ00577 322 aaKnown RBP5.06□□□□□ -1.6
CSMD3-209ENST00000519485 FANCCQ00597 558 aa5.06□□□□□ -1.6
CSMD3-209ENST00000519485 ZNF394Q53GI3 561 aa5.06□□□□□ -1.6
CSMD3-209ENST00000519485 MROH9Q5TGP6 573 aa5.06□□□□□ -1.6
CSMD3-209ENST00000519485 FBXW10Q5XX13 1052 aa5.06□□□□□ -1.6
CSMD3-209ENST00000519485 SLFN13Q68D06 897 aa5.06□□□□□ -1.6
CSMD3-209ENST00000519485 ADAT2Q7Z6V5 191 aaKnown RBP5.06□□□□□ -1.6
CSMD3-209ENST00000519485 OR6P1Q8NGX9 317 aa5.06□□□□□ -1.6
CSMD3-209ENST00000519485 SPATA32Q96LK8 384 aa5.06□□□□□ -1.6
CSMD3-209ENST00000519485 MARCH2Q9P0N8 246 aa5.06□□□□□ -1.6
CSMD3-209ENST00000519485 CCDC9Q9Y3X0 531 aaKnown RBP5.06□□□□□ -1.6
CSMD3-209ENST00000519485 PCDHGB7Q9Y5F8 929 aa5.06□□□□□ -1.6
CSMD3-209ENST00000519485 SCAMP3O14828 347 aaKnown RBP5.05□□□□□ -1.6
CSMD3-209ENST00000519485 THBDP07204 575 aa5.05□□□□□ -1.6
CSMD3-209ENST00000519485 PLS3P13797 630 aa5.05□□□□□ -1.6
CSMD3-209ENST00000519485 GIPRP48546 466 aa5.05□□□□□ -1.6
CSMD3-209ENST00000519485 NKX3-2P78367 333 aa5.05□□□□□ -1.6
CSMD3-209ENST00000519485 IQCEQ6IPM2 695 aa5.05□□□□□ -1.6
CSMD3-209ENST00000519485 MILR1Q7Z6M3 343 aa5.05□□□□□ -1.6
CSMD3-209ENST00000519485 CRACR2BQ8N4Y2 399 aaPredicted RBP5.05□□□□□ -1.6
CSMD3-209ENST00000519485 FGD4Q96M96 766 aa5.05□□□□□ -1.6
CSMD3-209ENST00000519485 WWC2-AS2Q96NR7 200 aa5.05□□□□□ -1.6
CSMD3-209ENST00000519485 TMEM168Q9H0V1 697 aa5.05□□□□□ -1.6
CSMD3-209ENST00000519485 CLEC1BQ9P126 229 aa5.05□□□□□ -1.6
CSMD3-209ENST00000519485 ZNF652Q9Y2D9 606 aa5.05□□□□□ -1.6
CSMD3-209ENST00000519485 EMC9Q9Y3B6 208 aa5.05□□□□□ -1.6
CSMD3-209ENST00000519485 X6R8D5 127 aa5.05□□□□□ -1.6
CSMD3-209ENST00000519485 A0A1W2PQH9 124 aa5.04□□□□□ -1.6
CSMD3-209ENST00000519485 C22orf46C9J442 243 aa5.04□□□□□ -1.6
CSMD3-209ENST00000519485 RECKO95980 971 aa5.04□□□□□ -1.6
CSMD3-209ENST00000519485 CYP1A1P04798 512 aaPredicted RBP5.04□□□□□ -1.6
CSMD3-209ENST00000519485 SOX9P48436 509 aa5.04□□□□□ -1.6
CSMD3-209ENST00000519485 CRB2Q5IJ48 1285 aa5.04□□□□□ -1.6
CSMD3-209ENST00000519485 PRAMEF18Q5VWM3 479 aa5.04□□□□□ -1.6
CSMD3-209ENST00000519485 POMZP3Q6PJE2 187 aa5.04□□□□□ -1.6
CSMD3-209ENST00000519485 ARHGEF18Q6ZSZ5 1173 aa5.04□□□□□ -1.6
CSMD3-209ENST00000519485 STK32CQ86UX6 486 aa5.04□□□□□ -1.6
CSMD3-209ENST00000519485 KLHL36Q8N4N3 616 aa5.04□□□□□ -1.6
CSMD3-209ENST00000519485 IGDCC4Q8TDY8 1250 aa5.04□□□□□ -1.6
CSMD3-209ENST00000519485 WRNIP1Q96S55 665 aa5.04□□□□□ -1.6
CSMD3-209ENST00000519485 CRBNQ96SW2 442 aa5.04□□□□□ -1.6
CSMD3-209ENST00000519485 HSPBP1Q9NZL4 362 aa5.04□□□□□ -1.6
CSMD3-209ENST00000519485 TCAF1Q9Y4C2 921 aa5.04□□□□□ -1.6
CSMD3-209ENST00000519485 ANKRD34BA5PLL1 514 aa5.03□□□□□ -1.6
CSMD3-209ENST00000519485 MUSKO15146 869 aa5.03□□□□□ -1.6
CSMD3-209ENST00000519485 AMHP03971 560 aa5.03□□□□□ -1.6
CSMD3-209ENST00000519485 IL13P35225 146 aa5.03□□□□□ -1.6
CSMD3-209ENST00000519485 ZNF143P52747 638 aaPredicted RBP5.03□□□□□ -1.6
CSMD3-209ENST00000519485 MEGF9Q9H1U4 602 aa5.03□□□□□ -1.6
CSMD3-209ENST00000519485 DEF6Q9H4E7 631 aa5.03□□□□□ -1.6
CSMD3-209ENST00000519485 L2HGDHQ9H9P8 463 aa5.03□□□□□ -1.6
CSMD3-209ENST00000519485 CYP26B1Q9NR63 512 aa5.03□□□□□ -1.6
CSMD3-209ENST00000519485 ZNF623O75123 536 aa5.02□□□□□ -1.61
CSMD3-209ENST00000519485 VAMP1P23763 118 aa5.02□□□□□ -1.61
Retrieved 100 of 20,778 RNA–protein pairs in 38 ms