RNA–Protein interactions for RNA: ENST00000519115.5

SDCBP-206, Transcript of syndecan binding protein, humanhuman

TSL 2

Gene SDCBP, Length 812 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SDCBP-206ENST00000519115 ZNF713Q8N859 430 aaPredicted RBP8.7□□□□□ -1.02
SDCBP-206ENST00000519115 NECAB1Q8N987 351 aa8.7□□□□□ -1.02
SDCBP-206ENST00000519115 DNERQ8NFT8 737 aa8.7□□□□□ -1.02
SDCBP-206ENST00000519115 FBXO18Q8NFZ0 1043 aa8.7□□□□□ -1.02
SDCBP-206ENST00000519115 BBXQ8WY36 941 aaPredicted RBP8.7□□□□□ -1.02
SDCBP-206ENST00000519115 RMDN3Q96TC7 470 aa8.7□□□□□ -1.02
SDCBP-206ENST00000519115 XPNPEP3Q9NQH7 507 aa8.7□□□□□ -1.02
SDCBP-206ENST00000519115 SH3GLB2Q9NR46 395 aa8.7□□□□□ -1.02
SDCBP-206ENST00000519115 PDGFCQ9NRA1 345 aa8.7□□□□□ -1.02
SDCBP-206ENST00000519115 FAM184BQ9ULE4 1060 aa8.7□□□□□ -1.02
SDCBP-206ENST00000519115 ZDHHC9Q9Y397 364 aa8.7□□□□□ -1.02
SDCBP-206ENST00000519115 MYADML2A6NDP7 307 aa8.69□□□□□ -1.02
SDCBP-206ENST00000519115 DDX11L8A8MPP1 907 aa8.69□□□□□ -1.02
SDCBP-206ENST00000519115 GCOM1H8Y6P7 765 aaPredicted RBP8.69□□□□□ -1.02
SDCBP-206ENST00000519115 POLR2MP0CAP2 368 aa8.69□□□□□ -1.02
SDCBP-206ENST00000519115 EDNRBP24530 442 aa8.69□□□□□ -1.02
SDCBP-206ENST00000519115 ADCYAP1R1P41586 468 aa8.69□□□□□ -1.02
SDCBP-206ENST00000519115 IRX5P78411 483 aaPredicted RBP8.69□□□□□ -1.02
SDCBP-206ENST00000519115 TRAF1Q13077 416 aa8.69□□□□□ -1.02
SDCBP-206ENST00000519115 STK3Q13188 491 aa8.69□□□□□ -1.02
SDCBP-206ENST00000519115 LRRC41Q15345 812 aa8.69□□□□□ -1.02
SDCBP-206ENST00000519115 UBE2SQ16763 222 aa8.69□□□□□ -1.02
SDCBP-206ENST00000519115 TMEM63BQ5T3F8 832 aa8.69□□□□□ -1.02
SDCBP-206ENST00000519115 ARHGEF16Q5VV41 709 aa8.69□□□□□ -1.02
SDCBP-206ENST00000519115 WWC2Q6AWC2 1192 aa8.69□□□□□ -1.02
SDCBP-206ENST00000519115 BRAPQ7Z569 592 aa8.69□□□□□ -1.02
SDCBP-206ENST00000519115 NECAB2Q7Z6G3 386 aa8.69□□□□□ -1.02
SDCBP-206ENST00000519115 ANKLE1Q8NAG6 615 aa8.69□□□□□ -1.02
SDCBP-206ENST00000519115 IL31RAQ8NI17 732 aa8.69□□□□□ -1.02
SDCBP-206ENST00000519115 MORC4Q8TE76 937 aa8.69□□□□□ -1.02
SDCBP-206ENST00000519115 NSUN6Q8TEA1 469 aaKnown RBP8.69□□□□□ -1.02
SDCBP-206ENST00000519115 TNPO1Q92973 898 aaKnown RBP8.69□□□□□ -1.02
SDCBP-206ENST00000519115 VTA1Q9NP79 307 aa8.69□□□□□ -1.02
SDCBP-206ENST00000519115 PXMP2Q9NR77 195 aa8.69□□□□□ -1.02
SDCBP-206ENST00000519115 ORC3Q9UBD5 711 aaPredicted RBP8.69□□□□□ -1.02
SDCBP-206ENST00000519115 MTMR6Q9Y217 621 aa8.69□□□□□ -1.02
SDCBP-206ENST00000519115 MORC2Q9Y6X9 1032 aaPredicted RBP8.69□□□□□ -1.02
SDCBP-206ENST00000519115 V9GY48 417 aaPredicted RBP8.69□□□□□ -1.02
SDCBP-206ENST00000519115 SYNRGQ9UMZ2 1314 aa8.69□□□□□ -1.02
SDCBP-206ENST00000519115 DNAH12Q6ZR08 3092 aa8.69□□□□□ -1.02
SDCBP-206ENST00000519115 KBTBD13C9JR72 458 aa8.68□□□□□ -1.02
SDCBP-206ENST00000519115 DNM1LO00429 736 aa8.68□□□□□ -1.02
SDCBP-206ENST00000519115 DTNBO60941 627 aa8.68□□□□□ -1.02
SDCBP-206ENST00000519115 DUSP11O75319 330 aaKnown RBP8.68□□□□□ -1.02
SDCBP-206ENST00000519115 GABBR2O75899 941 aa8.68□□□□□ -1.02
SDCBP-206ENST00000519115 C6orf222P0C671 652 aaPredicted RBP8.68□□□□□ -1.02
SDCBP-206ENST00000519115 MYCLP12524 364 aaPredicted RBP8.68□□□□□ -1.02
SDCBP-206ENST00000519115 FDPSP14324 419 aaKnown RBP8.68□□□□□ -1.02
SDCBP-206ENST00000519115 SMPD1P17405 629 aa8.68□□□□□ -1.02
SDCBP-206ENST00000519115 MCM4P33991 863 aa8.68□□□□□ -1.02
SDCBP-206ENST00000519115 NAPAP54920 295 aa8.68□□□□□ -1.02
SDCBP-206ENST00000519115 AKAP17AQ02040 695 aaKnown RBP8.68□□□□□ -1.02
SDCBP-206ENST00000519115 GHRHRQ02643 423 aa8.68□□□□□ -1.02
SDCBP-206ENST00000519115 TNFAIP2Q03169 654 aa8.68□□□□□ -1.02
SDCBP-206ENST00000519115 TYW1BQ6NUM6 668 aa8.68□□□□□ -1.02
SDCBP-206ENST00000519115 TAPT1Q6NXT6 567 aa8.68□□□□□ -1.02
SDCBP-206ENST00000519115 USP17L6PQ6QN14 398 aa8.68□□□□□ -1.02
SDCBP-206ENST00000519115 TMEM87AQ8NBN3 555 aa8.68□□□□□ -1.02
SDCBP-206ENST00000519115 SPRYD3Q8NCJ5 442 aa8.68□□□□□ -1.02
SDCBP-206ENST00000519115 ARRDC4Q8NCT1 418 aa8.68□□□□□ -1.02
SDCBP-206ENST00000519115 PHKBQ93100 1093 aa8.68□□□□□ -1.02
SDCBP-206ENST00000519115 ZFP91Q96JP5 570 aaPredicted RBP8.68□□□□□ -1.02
SDCBP-206ENST00000519115 MPHOSPH6Q99547 160 aaKnown RBP8.68□□□□□ -1.02
SDCBP-206ENST00000519115 SENP6Q9GZR1 1112 aaPredicted RBP8.68□□□□□ -1.02
SDCBP-206ENST00000519115 SCAND2PQ9GZW5 306 aaPredicted RBP8.68□□□□□ -1.02
SDCBP-206ENST00000519115 MAF1Q9H063 256 aa8.68□□□□□ -1.02
SDCBP-206ENST00000519115 C11orf49Q9H6J7 331 aa8.68□□□□□ -1.02
SDCBP-206ENST00000519115 CFAP45Q9UL16 551 aa8.68□□□□□ -1.02
SDCBP-206ENST00000519115 LOC102724159A0A0B4J2E5 919 aa8.67□□□□□ -1.02
SDCBP-206ENST00000519115 B4DLN1 442 aa8.67□□□□□ -1.02
SDCBP-206ENST00000519115 H3BQV1 296 aa8.67□□□□□ -1.02
SDCBP-206ENST00000519115 STXBP3O00186 592 aa8.67□□□□□ -1.02
SDCBP-206ENST00000519115 ADAMTS4O75173 837 aa8.67□□□□□ -1.02
SDCBP-206ENST00000519115 BAG4O95429 457 aaKnown RBP8.67□□□□□ -1.02
SDCBP-206ENST00000519115 F13A1P00488 732 aa8.67□□□□□ -1.02
SDCBP-206ENST00000519115 NR3C2P08235 984 aa8.67□□□□□ -1.02
SDCBP-206ENST00000519115 COL6A1P12109 1028 aa8.67□□□□□ -1.02
SDCBP-206ENST00000519115 CAPN2P17655 700 aa8.67□□□□□ -1.02
SDCBP-206ENST00000519115 U2AF2P26368 475 aaKnown RBP eCLIP8.67□□□□□ -1.02
SDCBP-206ENST00000519115 MRPL12P52815 198 aaKnown RBP8.67□□□□□ -1.02
SDCBP-206ENST00000519115 ATN1P54259 1190 aaPredicted RBP8.67□□□□□ -1.02
SDCBP-206ENST00000519115 BEX3Q00994 111 aa8.67□□□□□ -1.02
SDCBP-206ENST00000519115 TRIM29Q14134 588 aa8.67□□□□□ -1.02
SDCBP-206ENST00000519115 PGM5Q15124 567 aa8.67□□□□□ -1.02
SDCBP-206ENST00000519115 PWP2Q15269 919 aaKnown RBP8.67□□□□□ -1.02
SDCBP-206ENST00000519115 NFKBIBQ15653 356 aa8.67□□□□□ -1.02
SDCBP-206ENST00000519115 SEPT14Q6ZU15 432 aa8.67□□□□□ -1.02
SDCBP-206ENST00000519115 TLK2Q86UE8 772 aa8.67□□□□□ -1.02
SDCBP-206ENST00000519115 CCDC12Q8WUD4 166 aaPredicted RBP8.67□□□□□ -1.02
SDCBP-206ENST00000519115 DPF3Q92784 378 aa8.67□□□□□ -1.02
SDCBP-206ENST00000519115 COPS5Q92905 334 aa8.67□□□□□ -1.02
SDCBP-206ENST00000519115 CUL5Q93034 780 aa8.67□□□□□ -1.02
SDCBP-206ENST00000519115 FERMT2Q96AC1 680 aa8.67□□□□□ -1.02
SDCBP-206ENST00000519115 PDCD2LQ9BRP1 358 aa8.67□□□□□ -1.02
SDCBP-206ENST00000519115 HTATIP2Q9BUP3 242 aa8.67□□□□□ -1.02
SDCBP-206ENST00000519115 SLC26A6Q9BXS9 759 aa8.67□□□□□ -1.02
SDCBP-206ENST00000519115 WDR11Q9BZH6 1224 aa8.67□□□□□ -1.02
SDCBP-206ENST00000519115 GLT8D2Q9H1C3 349 aa8.67□□□□□ -1.02
SDCBP-206ENST00000519115 FOXP1Q9H334 677 aaPredicted RBP8.67□□□□□ -1.02
SDCBP-206ENST00000519115 PSTPIP2Q9H939 334 aa8.67□□□□□ -1.02
Retrieved 100 of 20,778 RNA–protein pairs in 27.3 ms